RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 PRPSAP1Q14558 356 aa16.75■□□□□ 0.27
GCDH-213ENST00000590627 HNRNPA1L2Q32P51 320 aaKnown RBP16.75■□□□□ 0.27
GCDH-213ENST00000590627 FNDC3BQ53EP0 1204 aaKnown RBP16.75■□□□□ 0.27
GCDH-213ENST00000590627 CARD16Q5EG05 197 aa16.75■□□□□ 0.27
GCDH-213ENST00000590627 EGFLAMQ63HQ2 1017 aa16.75■□□□□ 0.27
GCDH-213ENST00000590627 PCGF5Q86SE9 256 aa16.75■□□□□ 0.27
GCDH-213ENST00000590627 PRPF39Q86UA1 669 aaKnown RBP16.75■□□□□ 0.27
GCDH-213ENST00000590627 CHPFQ8IZ52 775 aa16.75■□□□□ 0.27
GCDH-213ENST00000590627 BBOF1Q8ND07 529 aa16.75■□□□□ 0.27
GCDH-213ENST00000590627 DEFB124Q8NES8 71 aa16.75■□□□□ 0.27
GCDH-213ENST00000590627 SNF8Q96H20 258 aa16.75■□□□□ 0.27
GCDH-213ENST00000590627 GDAP1L1Q96MZ0 367 aa16.75■□□□□ 0.27
GCDH-213ENST00000590627 GABRG3Q99928 467 aa16.75■□□□□ 0.27
GCDH-213ENST00000590627 SEMA3CQ99985 751 aa16.75■□□□□ 0.27
GCDH-213ENST00000590627 RHOXF2Q9BQY4 288 aa16.75■□□□□ 0.27
GCDH-213ENST00000590627 NOD2Q9HC29 1040 aa16.75■□□□□ 0.27
GCDH-213ENST00000590627 CD248Q9HCU0 757 aa16.75■□□□□ 0.27
GCDH-213ENST00000590627 GDF3Q9NR23 364 aa16.75■□□□□ 0.27
GCDH-213ENST00000590627 EIF2B3Q9NR50 452 aaKnown RBP16.75■□□□□ 0.27
GCDH-213ENST00000590627 TPX2Q9ULW0 747 aaKnown RBP16.75■□□□□ 0.27
GCDH-213ENST00000590627 AAR2Q9Y312 384 aaKnown RBP16.75■□□□□ 0.27
GCDH-213ENST00000590627 SNX24Q9Y343 169 aa16.75■□□□□ 0.27
GCDH-213ENST00000590627 FARP1Q9Y4F1 1045 aaPredicted RBP16.75■□□□□ 0.27
GCDH-213ENST00000590627 MUC22E2RYF6 1773 aaPredicted RBP16.74■□□□□ 0.27
GCDH-213ENST00000590627 WASH3PC4AMC7 463 aa16.74■□□□□ 0.27
GCDH-213ENST00000590627 DNALI1O14645 258 aaPredicted RBP16.74■□□□□ 0.27
GCDH-213ENST00000590627 INSIG1O15503 277 aa16.74■□□□□ 0.27
GCDH-213ENST00000590627 PSMD3O43242 534 aa16.74■□□□□ 0.27
GCDH-213ENST00000590627 SERPINF2P08697 491 aa16.74■□□□□ 0.27
GCDH-213ENST00000590627 WASP42768 502 aa16.74■□□□□ 0.27
GCDH-213ENST00000590627 SCNN1BP51168 640 aa16.74■□□□□ 0.27
GCDH-213ENST00000590627 GEMP55040 296 aa16.74■□□□□ 0.27
GCDH-213ENST00000590627 SKOR1P84550 965 aa16.74■□□□□ 0.27
GCDH-213ENST00000590627 CDK16Q00536 496 aa16.74■□□□□ 0.27
GCDH-213ENST00000590627 IHHQ14623 411 aa16.74■□□□□ 0.27
GCDH-213ENST00000590627 ACCSLQ4AC99 568 aa16.74■□□□□ 0.27
GCDH-213ENST00000590627 RNASEH2BQ5TBB1 312 aaKnown RBP16.74■□□□□ 0.27
GCDH-213ENST00000590627 KCTD11Q693B1 232 aa16.74■□□□□ 0.27
GCDH-213ENST00000590627 NCEH1Q6PIU2 408 aa16.74■□□□□ 0.27
GCDH-213ENST00000590627 SRLQ86TD4 932 aa16.74■□□□□ 0.27
GCDH-213ENST00000590627 OR2A12Q8NGT7 310 aa16.74■□□□□ 0.27
GCDH-213ENST00000590627 CPT1BQ92523 772 aa16.74■□□□□ 0.27
GCDH-213ENST00000590627 PTPRN2Q92932 1015 aa16.74■□□□□ 0.27
GCDH-213ENST00000590627 OXNAD1Q96HP4 312 aaPredicted RBP16.74■□□□□ 0.27
GCDH-213ENST00000590627 MLPHQ9BV36 600 aaPredicted RBP16.74■□□□□ 0.27
GCDH-213ENST00000590627 CPEB1Q9BZB8 566 aaKnown RBP16.74■□□□□ 0.27
GCDH-213ENST00000590627 FAM129AQ9BZQ8 928 aa16.74■□□□□ 0.27
GCDH-213ENST00000590627 TM6SF2Q9BZW4 377 aa16.74■□□□□ 0.27
GCDH-213ENST00000590627 TRIM31Q9BZY9 425 aa16.74■□□□□ 0.27
GCDH-213ENST00000590627 ANKZF1Q9H8Y5 726 aa16.74■□□□□ 0.27
GCDH-213ENST00000590627 SCUBE2Q9NQ36 999 aa16.74■□□□□ 0.27
GCDH-213ENST00000590627 GRHL1Q9NZI5 618 aa16.74■□□□□ 0.27
GCDH-213ENST00000590627 SUN2Q9UH99 717 aa16.74■□□□□ 0.27
GCDH-213ENST00000590627 FAM153AQ9UHL3 310 aa16.74■□□□□ 0.27
GCDH-213ENST00000590627 TTLL3Q9Y4R7 772 aa16.74■□□□□ 0.27
GCDH-213ENST00000590627 IGF2RP11717 2491 aa16.74■□□□□ 0.27
GCDH-213ENST00000590627 ATXN2Q99700 1313 aaKnown RBP16.73■□□□□ 0.27
GCDH-213ENST00000590627 FAM208BQ5VWN6 2430 aa16.73■□□□□ 0.27
GCDH-213ENST00000590627 IGHV1OR15-9A0A0B4J2B8 117 aa16.73■□□□□ 0.27
GCDH-213ENST00000590627 EDDM13A0A1B0GTR0 161 aa16.73■□□□□ 0.27
GCDH-213ENST00000590627 GOLGA6CA6NDK9 693 aa16.73■□□□□ 0.27
GCDH-213ENST00000590627 GOLGA6BA6NDN3 693 aa16.73■□□□□ 0.27
GCDH-213ENST00000590627 TMEM8BA6NDV4 472 aa16.73■□□□□ 0.27
GCDH-213ENST00000590627 C1QTNF9BB2RNN3 333 aa16.73■□□□□ 0.27
GCDH-213ENST00000590627 SMAPO00193 183 aa16.73■□□□□ 0.27
GCDH-213ENST00000590627 TP73O15350 636 aa16.73■□□□□ 0.27
GCDH-213ENST00000590627 SUN1O94901 812 aa16.73■□□□□ 0.27
GCDH-213ENST00000590627 POP4O95707 220 aaKnown RBP16.73■□□□□ 0.27
GCDH-213ENST00000590627 CFIP05156 583 aa16.73■□□□□ 0.27
GCDH-213ENST00000590627 C1QTNF9P0C862 333 aa16.73■□□□□ 0.27
GCDH-213ENST00000590627 GOLGA6DP0CG33 693 aa16.73■□□□□ 0.27
GCDH-213ENST00000590627 TPSB2P20231 275 aa16.73■□□□□ 0.27
GCDH-213ENST00000590627 PRKCHP24723 683 aa16.73■□□□□ 0.27
GCDH-213ENST00000590627 IL12RB1P42701 662 aa16.73■□□□□ 0.27
GCDH-213ENST00000590627 RECQLP46063 649 aaPredicted RBP16.73■□□□□ 0.27
GCDH-213ENST00000590627 ATXN3P54252 364 aaPredicted RBP16.73■□□□□ 0.27
GCDH-213ENST00000590627 BASP1P80723 227 aaKnown RBP16.73■□□□□ 0.27
GCDH-213ENST00000590627 MPP3Q13368 585 aa16.73■□□□□ 0.27
GCDH-213ENST00000590627 KCNJ11Q14654 390 aa16.73■□□□□ 0.27
GCDH-213ENST00000590627 MORF4L2Q15014 288 aa16.73■□□□□ 0.27
GCDH-213ENST00000590627 TPSAB1Q15661 275 aa16.73■□□□□ 0.27
GCDH-213ENST00000590627 ERCC6LQ2NKX8 1250 aa16.73■□□□□ 0.27
GCDH-213ENST00000590627 MYLK3Q32MK0 819 aa16.73■□□□□ 0.27
GCDH-213ENST00000590627 ATXN7L2Q5T6C5 722 aaPredicted RBP16.73■□□□□ 0.27
GCDH-213ENST00000590627 IZUMO3Q5VZ72 239 aa16.73■□□□□ 0.27
GCDH-213ENST00000590627 KDELC1Q6UW63 502 aa16.73■□□□□ 0.27
GCDH-213ENST00000590627 SERPINA13PQ6UXR4 307 aa16.73■□□□□ 0.27
GCDH-213ENST00000590627 Q6ZVU0 165 aa16.73■□□□□ 0.27
GCDH-213ENST00000590627 PIP4P1Q86T03 277 aa16.73■□□□□ 0.27
GCDH-213ENST00000590627 HOOK3Q86VS8 718 aa16.73■□□□□ 0.27
GCDH-213ENST00000590627 PPIL6Q8IXY8 311 aa16.73■□□□□ 0.27
GCDH-213ENST00000590627 IFT20Q8IY31 132 aa16.73■□□□□ 0.27
GCDH-213ENST00000590627 NAT8LQ8N9F0 302 aa16.73■□□□□ 0.27
GCDH-213ENST00000590627 EIF1ADQ8N9N8 165 aaKnown RBP16.73■□□□□ 0.27
GCDH-213ENST00000590627 KDF1Q8NAX2 398 aaPredicted RBP16.73■□□□□ 0.27
GCDH-213ENST00000590627 SPATA22Q8NHS9 363 aa16.73■□□□□ 0.27
GCDH-213ENST00000590627 VOPP1Q96AW1 172 aa16.73■□□□□ 0.27
GCDH-213ENST00000590627 EXOC2Q96KP1 924 aa16.73■□□□□ 0.27
GCDH-213ENST00000590627 TUBGCP5Q96RT8 1024 aa16.73■□□□□ 0.27
GCDH-213ENST00000590627 ACOX2Q99424 681 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms