RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 SNX12Q9UMY4 172 aa21.69■■□□□ 1.06
R3HDM4-206ENST00000590454 RNASEH2AO75792 299 aaKnown RBP21.68■■□□□ 1.06
R3HDM4-206ENST00000590454 ADH1BP00325 375 aa21.68■■□□□ 1.06
R3HDM4-206ENST00000590454 PRNPP04156 253 aa21.68■■□□□ 1.06
R3HDM4-206ENST00000590454 RBP3P10745 1247 aa21.68■■□□□ 1.06
R3HDM4-206ENST00000590454 C5AR1P21730 350 aa21.68■■□□□ 1.06
R3HDM4-206ENST00000590454 MSNP26038 577 aaKnown RBP21.68■■□□□ 1.06
R3HDM4-206ENST00000590454 CD6P30203 668 aa21.68■■□□□ 1.06
R3HDM4-206ENST00000590454 CSNK1DP48730 415 aa21.68■■□□□ 1.06
R3HDM4-206ENST00000590454 DSC2Q02487 901 aa21.68■■□□□ 1.06
R3HDM4-206ENST00000590454 ZBTB16Q05516 673 aa21.68■■□□□ 1.06
R3HDM4-206ENST00000590454 ITKQ08881 620 aa21.68■■□□□ 1.06
R3HDM4-206ENST00000590454 NIPAL4Q0D2K0 466 aa21.68■■□□□ 1.06
R3HDM4-206ENST00000590454 CNTN1Q12860 1018 aa21.68■■□□□ 1.06
R3HDM4-206ENST00000590454 TMPRSS7Q7RTY8 843 aa21.68■■□□□ 1.06
R3HDM4-206ENST00000590454 CAMK1DQ8IU85 385 aa21.68■■□□□ 1.06
R3HDM4-206ENST00000590454 GANCQ8TET4 914 aa21.68■■□□□ 1.06
R3HDM4-206ENST00000590454 DNASE2BQ8WZ79 361 aa21.68■■□□□ 1.06
R3HDM4-206ENST00000590454 TRIM44Q96DX7 344 aaPredicted RBP21.68■■□□□ 1.06
R3HDM4-206ENST00000590454 KLHL32Q96NJ5 620 aa21.68■■□□□ 1.06
R3HDM4-206ENST00000590454 AGAP3Q96P47 875 aa21.68■■□□□ 1.06
R3HDM4-206ENST00000590454 BBC3Q96PG8 261 aaPredicted RBP21.68■■□□□ 1.06
R3HDM4-206ENST00000590454 DKK4Q9UBT3 224 aa21.68■■□□□ 1.06
R3HDM4-206ENST00000590454 DNPEPQ9ULA0 475 aa21.68■■□□□ 1.06
R3HDM4-206ENST00000590454 ATP8A1Q9Y2Q0 1164 aa21.68■■□□□ 1.06
R3HDM4-206ENST00000590454 TTLL3Q9Y4R7 772 aa21.68■■□□□ 1.06
R3HDM4-206ENST00000590454 NBEAQ8NFP9 2946 aa21.68■■□□□ 1.06
R3HDM4-206ENST00000590454 ANKRD36A6QL64 1941 aa21.67■■□□□ 1.06
R3HDM4-206ENST00000590454 MEI4A8MW99 385 aa21.67■■□□□ 1.06
R3HDM4-206ENST00000590454 HACD1B0YJ81 288 aa21.67■■□□□ 1.06
R3HDM4-206ENST00000590454 C1QTNF3-AMACRE9PGA6 284 aa21.67■■□□□ 1.06
R3HDM4-206ENST00000590454 IGLV3-19P01714 112 aa21.67■■□□□ 1.06
R3HDM4-206ENST00000590454 ACSL1P33121 698 aa21.67■■□□□ 1.06
R3HDM4-206ENST00000590454 FAM46CQ5VWP2 391 aa21.67■■□□□ 1.06
R3HDM4-206ENST00000590454 DARS2Q6PI48 645 aaKnown RBP21.67■■□□□ 1.06
R3HDM4-206ENST00000590454 NCEH1Q6PIU2 408 aa21.67■■□□□ 1.06
R3HDM4-206ENST00000590454 GDPD4Q6W3E5 623 aa21.67■■□□□ 1.06
R3HDM4-206ENST00000590454 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.67■■□□□ 1.06
R3HDM4-206ENST00000590454 RASGEF1CQ8N431 466 aa21.67■■□□□ 1.06
R3HDM4-206ENST00000590454 SLC35B2Q8TB61 432 aa21.67■■□□□ 1.06
R3HDM4-206ENST00000590454 ARRDC2Q8TBH0 407 aa21.67■■□□□ 1.06
R3HDM4-206ENST00000590454 HTR3CQ8WXA8 447 aa21.67■■□□□ 1.06
R3HDM4-206ENST00000590454 TOE1Q96GM8 510 aaKnown RBP21.67■■□□□ 1.06
R3HDM4-206ENST00000590454 PBKQ96KB5 322 aa21.67■■□□□ 1.06
R3HDM4-206ENST00000590454 NUDCD1Q96RS6 583 aa21.67■■□□□ 1.06
R3HDM4-206ENST00000590454 NAPGQ99747 312 aaPredicted RBP21.67■■□□□ 1.06
R3HDM4-206ENST00000590454 SEMA3CQ99985 751 aa21.67■■□□□ 1.06
R3HDM4-206ENST00000590454 CPEB1Q9BZB8 566 aaKnown RBP21.67■■□□□ 1.06
R3HDM4-206ENST00000590454 USP29Q9HBJ7 922 aa21.67■■□□□ 1.06
R3HDM4-206ENST00000590454 FREM2Q5SZK8 3169 aa21.67■■□□□ 1.06
R3HDM4-206ENST00000590454 ZNF883P0CG24 379 aa21.66■■□□□ 1.06
R3HDM4-206ENST00000590454 CD68P34810 354 aaPredicted RBP21.66■■□□□ 1.06
R3HDM4-206ENST00000590454 HSPA9P38646 679 aaKnown RBP21.66■■□□□ 1.06
R3HDM4-206ENST00000590454 SNX1Q13596 522 aa21.66■■□□□ 1.06
R3HDM4-206ENST00000590454 LONRF2Q1L5Z9 754 aa21.66■■□□□ 1.06
R3HDM4-206ENST00000590454 TTC31Q49AM3 519 aaPredicted RBP21.66■■□□□ 1.06
R3HDM4-206ENST00000590454 TEX44Q53QW1 395 aa21.66■■□□□ 1.06
R3HDM4-206ENST00000590454 PIP5KL1Q5T9C9 394 aa21.66■■□□□ 1.06
R3HDM4-206ENST00000590454 ALG1LQ6GMV1 187 aa21.66■■□□□ 1.06
R3HDM4-206ENST00000590454 PARS2Q7L3T8 475 aaKnown RBP21.66■■□□□ 1.06
R3HDM4-206ENST00000590454 ZSWIM9Q86XI8 627 aa21.66■■□□□ 1.06
R3HDM4-206ENST00000590454 BBS5Q8N3I7 341 aa21.66■■□□□ 1.06
R3HDM4-206ENST00000590454 TTC13Q8NBP0 860 aa21.66■■□□□ 1.06
R3HDM4-206ENST00000590454 COL26A1Q96A83 441 aa21.66■■□□□ 1.06
R3HDM4-206ENST00000590454 OMDQ99983 421 aa21.66■■□□□ 1.06
R3HDM4-206ENST00000590454 GAREM1Q9H706 876 aa21.66■■□□□ 1.06
R3HDM4-206ENST00000590454 WSB2Q9NYS7 404 aaPredicted RBP21.66■■□□□ 1.06
R3HDM4-206ENST00000590454 F5H423 210 aaPredicted RBP21.65■■□□□ 1.06
R3HDM4-206ENST00000590454 LIASO43766 372 aa21.65■■□□□ 1.06
R3HDM4-206ENST00000590454 CER1O95813 267 aa21.65■■□□□ 1.06
R3HDM4-206ENST00000590454 MMP2P08253 660 aa21.65■■□□□ 1.06
R3HDM4-206ENST00000590454 KCTD19Q17RG1 926 aaPredicted RBP21.65■■□□□ 1.06
R3HDM4-206ENST00000590454 ZNF805Q5CZA5 627 aa21.65■■□□□ 1.06
R3HDM4-206ENST00000590454 LRRC73Q5JTD7 316 aa21.65■■□□□ 1.06
R3HDM4-206ENST00000590454 AGBL4Q5VU57 503 aa21.65■■□□□ 1.06
R3HDM4-206ENST00000590454 PAPD7Q5XG87 772 aaKnown RBP21.65■■□□□ 1.06
R3HDM4-206ENST00000590454 IL27RAQ6UWB1 636 aa21.65■■□□□ 1.06
R3HDM4-206ENST00000590454 NYAP1Q6ZVC0 841 aa21.65■■□□□ 1.06
R3HDM4-206ENST00000590454 USP30Q70CQ3 517 aa21.65■■□□□ 1.06
R3HDM4-206ENST00000590454 CDKL3Q8IVW4 592 aaPredicted RBP21.65■■□□□ 1.06
R3HDM4-206ENST00000590454 ZNF567Q8N184 647 aa21.65■■□□□ 1.06
R3HDM4-206ENST00000590454 CADM4Q8NFZ8 388 aa21.65■■□□□ 1.06
R3HDM4-206ENST00000590454 FAM131CQ96AQ9 280 aa21.65■■□□□ 1.06
R3HDM4-206ENST00000590454 POLR1EQ9GZS1 481 aaKnown RBP21.65■■□□□ 1.06
R3HDM4-206ENST00000590454 MIR1-1HGQ9H1L0 117 aa21.65■■□□□ 1.06
R3HDM4-206ENST00000590454 SUV39H2Q9H5I1 410 aa21.65■■□□□ 1.06
R3HDM4-206ENST00000590454 TM7SF3Q9NS93 570 aa21.65■■□□□ 1.06
R3HDM4-206ENST00000590454 SCML1Q9UN30 329 aa21.65■■□□□ 1.06
R3HDM4-206ENST00000590454 PCDHGC4Q9Y5F7 938 aa21.65■■□□□ 1.06
R3HDM4-206ENST00000590454 ITPR1Q14643 2758 aa21.64■■□□□ 1.05
R3HDM4-206ENST00000590454 C16orf96A6NNT2 1141 aa21.64■■□□□ 1.05
R3HDM4-206ENST00000590454 TRAFD1O14545 582 aaPredicted RBP21.64■■□□□ 1.05
R3HDM4-206ENST00000590454 KCNN4O15554 427 aa21.64■■□□□ 1.05
R3HDM4-206ENST00000590454 NEBLO76041 1014 aa21.64■■□□□ 1.05
R3HDM4-206ENST00000590454 ITIH2P19823 946 aa21.64■■□□□ 1.05
R3HDM4-206ENST00000590454 ITGB7P26010 798 aa21.64■■□□□ 1.05
R3HDM4-206ENST00000590454 GDF10P55107 478 aa21.64■■□□□ 1.05
R3HDM4-206ENST00000590454 TAS2R38P59533 333 aa21.64■■□□□ 1.05
R3HDM4-206ENST00000590454 AP1S1P61966 158 aa21.64■■□□□ 1.05
R3HDM4-206ENST00000590454 ETF1P62495 437 aaKnown RBP21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms