RNA–Protein interactions for RNA: ENST00000590188.5

CIRBP-227, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-227ENST00000590188 PCCBP05166 539 aa18.14■□□□□ 0.49
CIRBP-227ENST00000590188 CR2P20023 1033 aa18.14■□□□□ 0.49
CIRBP-227ENST00000590188 GARSP41250 739 aaKnown RBP18.14■□□□□ 0.49
CIRBP-227ENST00000590188 NOP2P46087 812 aaKnown RBP18.14■□□□□ 0.49
CIRBP-227ENST00000590188 SUOXP51687 545 aa18.14■□□□□ 0.49
CIRBP-227ENST00000590188 PFN3P60673 137 aa18.14■□□□□ 0.49
CIRBP-227ENST00000590188 GALNT2Q10471 571 aa18.14■□□□□ 0.49
CIRBP-227ENST00000590188 TRAF2Q12933 501 aa18.14■□□□□ 0.49
CIRBP-227ENST00000590188 ST3GAL2Q16842 350 aa18.14■□□□□ 0.49
CIRBP-227ENST00000590188 PARGQ86W56 976 aa18.14■□□□□ 0.49
CIRBP-227ENST00000590188 FAM174AQ8TBP5 190 aa18.14■□□□□ 0.49
CIRBP-227ENST00000590188 ECHDC3Q96DC8 303 aa18.14■□□□□ 0.49
CIRBP-227ENST00000590188 MGME1Q9BQP7 344 aa18.14■□□□□ 0.49
CIRBP-227ENST00000590188 C1QTNF7Q9BXJ2 289 aa18.14■□□□□ 0.49
CIRBP-227ENST00000590188 GOLPH3Q9H4A6 298 aa18.14■□□□□ 0.49
CIRBP-227ENST00000590188 GPR27Q9NS67 375 aa18.14■□□□□ 0.49
CIRBP-227ENST00000590188 KLF15Q9UIH9 416 aa18.14■□□□□ 0.49
CIRBP-227ENST00000590188 MSRB2Q9Y3D2 182 aa18.14■□□□□ 0.49
CIRBP-227ENST00000590188 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.13■□□□□ 0.49
CIRBP-227ENST00000590188 SIGLEC6O43699 453 aa18.13■□□□□ 0.49
CIRBP-227ENST00000590188 MTA2O94776 668 aa18.13■□□□□ 0.49
CIRBP-227ENST00000590188 CPP00450 1065 aa18.13■□□□□ 0.49
CIRBP-227ENST00000590188 MYF5P13349 255 aa18.13■□□□□ 0.49
CIRBP-227ENST00000590188 HSPA9P38646 679 aaKnown RBP18.13■□□□□ 0.49
CIRBP-227ENST00000590188 ARHGAP25P42331 645 aa18.13■□□□□ 0.49
CIRBP-227ENST00000590188 THOP1P52888 689 aa18.13■□□□□ 0.49
CIRBP-227ENST00000590188 SLC10A2Q12908 348 aaPredicted RBP18.13■□□□□ 0.49
CIRBP-227ENST00000590188 RALGDSQ12967 914 aa18.13■□□□□ 0.49
CIRBP-227ENST00000590188 EIF2B5Q13144 721 aaKnown RBP18.13■□□□□ 0.49
CIRBP-227ENST00000590188 LRRC14Q15048 493 aa18.13■□□□□ 0.49
CIRBP-227ENST00000590188 WSCD2Q2TBF2 565 aa18.13■□□□□ 0.49
CIRBP-227ENST00000590188 DENND2CQ68D51 928 aa18.13■□□□□ 0.49
CIRBP-227ENST00000590188 DCP2Q8IU60 420 aaKnown RBP18.13■□□□□ 0.49
CIRBP-227ENST00000590188 RBFAQ8N0V3 343 aa18.13■□□□□ 0.49
CIRBP-227ENST00000590188 CCNYQ8ND76 341 aa18.13■□□□□ 0.49
CIRBP-227ENST00000590188 RNF25Q96BH1 459 aaPredicted RBP18.13■□□□□ 0.49
CIRBP-227ENST00000590188 FAF2Q96CS3 445 aa18.13■□□□□ 0.49
CIRBP-227ENST00000590188 RNF157Q96PX1 679 aa18.13■□□□□ 0.49
CIRBP-227ENST00000590188 TCEAL2Q9H3H9 227 aaPredicted RBP18.13■□□□□ 0.49
CIRBP-227ENST00000590188 B4GALT6Q9UBX8 382 aa18.13■□□□□ 0.49
CIRBP-227ENST00000590188 TDRD6O60522 2096 aaKnown RBP18.13■□□□□ 0.49
CIRBP-227ENST00000590188 FAM149AA5PLN7 773 aa18.12■□□□□ 0.49
CIRBP-227ENST00000590188 SOWAHDA6NJG2 315 aa18.12■□□□□ 0.49
CIRBP-227ENST00000590188 SPOPO43791 374 aa18.12■□□□□ 0.49
CIRBP-227ENST00000590188 ELFN1P0C7U0 828 aa18.12■□□□□ 0.49
CIRBP-227ENST00000590188 JUNDP17535 347 aa18.12■□□□□ 0.49
CIRBP-227ENST00000590188 COMTP21964 271 aa18.12■□□□□ 0.49
CIRBP-227ENST00000590188 PTPRRQ15256 657 aa18.12■□□□□ 0.49
CIRBP-227ENST00000590188 LLGL1Q15334 1064 aa18.12■□□□□ 0.49
CIRBP-227ENST00000590188 TCEA2Q15560 299 aa18.12■□□□□ 0.49
CIRBP-227ENST00000590188 IFI16Q16666 785 aaKnown RBP18.12■□□□□ 0.49
CIRBP-227ENST00000590188 HS1BP3Q53T59 392 aa18.12■□□□□ 0.49
CIRBP-227ENST00000590188 ODF2Q5BJF6 829 aa18.12■□□□□ 0.49
CIRBP-227ENST00000590188 NPNTQ6UXI9 565 aa18.12■□□□□ 0.49
CIRBP-227ENST00000590188 RFX6Q8HWS3 928 aa18.12■□□□□ 0.49
CIRBP-227ENST00000590188 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.12■□□□□ 0.49
CIRBP-227ENST00000590188 LMX1AQ8TE12 382 aa18.12■□□□□ 0.49
CIRBP-227ENST00000590188 GATA6Q92908 595 aa18.12■□□□□ 0.49
CIRBP-227ENST00000590188 MRFAP1L1Q96HT8 127 aa18.12■□□□□ 0.49
CIRBP-227ENST00000590188 SEMA3CQ99985 751 aa18.12■□□□□ 0.49
CIRBP-227ENST00000590188 TMEM121BQ9BXQ6 578 aaPredicted RBP18.12■□□□□ 0.49
CIRBP-227ENST00000590188 RBM22Q9NW64 420 aaKnown RBP eCLIP18.12■□□□□ 0.492e-8■■■□□ 16.7
CIRBP-227ENST00000590188 DTLQ9NZJ0 730 aa18.12■□□□□ 0.49
CIRBP-227ENST00000590188 INTUQ9ULD6 942 aa18.12■□□□□ 0.49
CIRBP-227ENST00000590188 PNMA8BQ9ULN7 279 aaPredicted RBP18.12■□□□□ 0.49
CIRBP-227ENST00000590188 PCDHA13Q9Y5I0 950 aa18.12■□□□□ 0.49
CIRBP-227ENST00000590188 HEY1Q9Y5J3 304 aa18.12■□□□□ 0.49
CIRBP-227ENST00000590188 LRRK1Q38SD2 2015 aa18.11■□□□□ 0.49
CIRBP-227ENST00000590188 H3BM21 787 aa18.11■□□□□ 0.49
CIRBP-227ENST00000590188 SCAMP1O15126 338 aa18.11■□□□□ 0.49
CIRBP-227ENST00000590188 HTRA2O43464 458 aaPredicted RBP18.11■□□□□ 0.49
CIRBP-227ENST00000590188 RFPL3O75679 317 aa18.11■□□□□ 0.49
CIRBP-227ENST00000590188 RECQL5O94762 991 aaPredicted RBP18.11■□□□□ 0.49
CIRBP-227ENST00000590188 CSF2P04141 144 aa18.11■□□□□ 0.49
CIRBP-227ENST00000590188 CTPS1P17812 591 aa18.11■□□□□ 0.49
CIRBP-227ENST00000590188 ACADVLP49748 655 aa18.11■□□□□ 0.49
CIRBP-227ENST00000590188 HNRNPKP61978 463 aaKnown RBP eCLIP18.11■□□□□ 0.49
CIRBP-227ENST00000590188 POLR2LP62875 67 aaKnown RBP18.11■□□□□ 0.49
CIRBP-227ENST00000590188 DYNLT1P63172 113 aa18.11■□□□□ 0.49
CIRBP-227ENST00000590188 DAB2P98082 770 aa18.11■□□□□ 0.49
CIRBP-227ENST00000590188 DSC2Q02487 901 aa18.11■□□□□ 0.49
CIRBP-227ENST00000590188 C1orf61Q13536 156 aa18.11■□□□□ 0.49
CIRBP-227ENST00000590188 INPP5AQ14642 412 aa18.11■□□□□ 0.49
CIRBP-227ENST00000590188 TIGD7Q6NT04 549 aaPredicted RBP18.11■□□□□ 0.49
CIRBP-227ENST00000590188 LIPIQ6XZB0 460 aa18.11■□□□□ 0.49
CIRBP-227ENST00000590188 NYAP1Q6ZVC0 841 aa18.11■□□□□ 0.49
CIRBP-227ENST00000590188 B4GALNT4Q76KP1 1039 aa18.11■□□□□ 0.49
CIRBP-227ENST00000590188 DPPA4Q7L190 304 aa18.11■□□□□ 0.49
CIRBP-227ENST00000590188 LRRC49Q8IUZ0 686 aa18.11■□□□□ 0.49
CIRBP-227ENST00000590188 TEX26Q8N6G2 289 aa18.11■□□□□ 0.49
CIRBP-227ENST00000590188 PLD5Q8N7P1 536 aa18.11■□□□□ 0.49
CIRBP-227ENST00000590188 PLA2G15Q8NCC3 412 aa18.11■□□□□ 0.49
CIRBP-227ENST00000590188 ZNF548Q8NEK5 533 aaPredicted RBP18.11■□□□□ 0.49
CIRBP-227ENST00000590188 SMIM14Q96QK8 99 aa18.11■□□□□ 0.49
CIRBP-227ENST00000590188 MAK16Q9BXY0 300 aaKnown RBP18.11■□□□□ 0.49
CIRBP-227ENST00000590188 OR1A2Q9Y585 309 aa18.11■□□□□ 0.49
CIRBP-227ENST00000590188 COL5A1P20908 1838 aaPredicted RBP18.11■□□□□ 0.49
CIRBP-227ENST00000590188 A0A0U1RQS6 177 aa18.1■□□□□ 0.49
CIRBP-227ENST00000590188 C3orf70A6NLC5 250 aaPredicted RBP18.1■□□□□ 0.49
CIRBP-227ENST00000590188 APOL1O14791 398 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms