RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 WASHC5Q12768 1159 aa21.45■■□□□ 1.02
ATG4D-212ENST00000590096 TEAD4Q15561 434 aa21.45■■□□□ 1.02
ATG4D-212ENST00000590096 ZNF284Q2VY69 593 aa21.45■■□□□ 1.02
ATG4D-212ENST00000590096 AASDHQ4L235 1098 aaPredicted RBP21.45■■□□□ 1.02
ATG4D-212ENST00000590096 TMEM259Q4ZIN3 620 aa21.45■■□□□ 1.02
ATG4D-212ENST00000590096 SEL1L3Q68CR1 1132 aa21.45■■□□□ 1.02
ATG4D-212ENST00000590096 ADAT2Q7Z6V5 191 aaKnown RBP21.45■■□□□ 1.02
ATG4D-212ENST00000590096 NDUFAF2Q8N183 169 aa21.45■■□□□ 1.02
ATG4D-212ENST00000590096 C1orf216Q8TAB5 229 aa21.45■■□□□ 1.02
ATG4D-212ENST00000590096 SPOCK2Q92563 424 aa21.45■■□□□ 1.02
ATG4D-212ENST00000590096 KLK6Q92876 244 aa21.45■■□□□ 1.02
ATG4D-212ENST00000590096 ORAI3Q9BRQ5 295 aa21.45■■□□□ 1.02
ATG4D-212ENST00000590096 SLC25A51Q9H1U9 297 aa21.45■■□□□ 1.02
ATG4D-212ENST00000590096 EBF2Q9HAK2 575 aa21.45■■□□□ 1.02
ATG4D-212ENST00000590096 GLOD4Q9HC38 313 aa21.45■■□□□ 1.02
ATG4D-212ENST00000590096 TM9SF3Q9HD45 589 aa21.45■■□□□ 1.02
ATG4D-212ENST00000590096 AASDHPPTQ9NRN7 309 aa21.45■■□□□ 1.02
ATG4D-212ENST00000590096 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.45■■□□□ 1.02
ATG4D-212ENST00000590096 PLXNA2O75051 1894 aa21.45■■□□□ 1.02
ATG4D-212ENST00000590096 FRYLO94915 3013 aa21.45■■□□□ 1.02
ATG4D-212ENST00000590096 TCRBV7S2A1N4TA0A589 114 aa21.44■■□□□ 1.02
ATG4D-212ENST00000590096 USP27XA6NNY8 438 aa21.44■■□□□ 1.02
ATG4D-212ENST00000590096 ENC1O14682 589 aa21.44■■□□□ 1.02
ATG4D-212ENST00000590096 SLC31A1O15431 190 aa21.44■■□□□ 1.02
ATG4D-212ENST00000590096 STK10O94804 968 aaKnown RBP21.44■■□□□ 1.02
ATG4D-212ENST00000590096 PRKCGP05129 697 aa21.44■■□□□ 1.02
ATG4D-212ENST00000590096 ITIH2P19823 946 aa21.44■■□□□ 1.02
ATG4D-212ENST00000590096 SGCGQ13326 291 aa21.44■■□□□ 1.02
ATG4D-212ENST00000590096 TMEM52BQ4KMG9 183 aa21.44■■□□□ 1.02
ATG4D-212ENST00000590096 FAM182AQ5T1J6 154 aa21.44■■□□□ 1.02
ATG4D-212ENST00000590096 NAPEPLDQ6IQ20 393 aa21.44■■□□□ 1.02
ATG4D-212ENST00000590096 PID1Q7Z2X4 250 aa21.44■■□□□ 1.02
ATG4D-212ENST00000590096 SLC35F6Q8N357 371 aa21.44■■□□□ 1.02
ATG4D-212ENST00000590096 SLC6A18Q96N87 628 aa21.44■■□□□ 1.02
ATG4D-212ENST00000590096 TDRD1Q9BXT4 1180 aaKnown RBP21.44■■□□□ 1.02
ATG4D-212ENST00000590096 SLC17A9Q9BYT1 436 aa21.44■■□□□ 1.02
ATG4D-212ENST00000590096 C10orf88Q9H8K7 445 aa21.44■■□□□ 1.02
ATG4D-212ENST00000590096 TRHDEQ9UKU6 1024 aa21.44■■□□□ 1.02
ATG4D-212ENST00000590096 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.44■■□□□ 1.02
ATG4D-212ENST00000590096 DCHS1Q96JQ0 3298 aa21.43■■□□□ 1.02
ATG4D-212ENST00000590096 IGLON5A6NGN9 336 aa21.43■■□□□ 1.02
ATG4D-212ENST00000590096 PRAMEF26H0Y7S4 382 aa21.43■■□□□ 1.02
ATG4D-212ENST00000590096 KCNN4O15554 427 aa21.43■■□□□ 1.02
ATG4D-212ENST00000590096 SYPP08247 313 aa21.43■■□□□ 1.02
ATG4D-212ENST00000590096 PRLRP16471 622 aa21.43■■□□□ 1.02
ATG4D-212ENST00000590096 AKT2P31751 481 aa21.43■■□□□ 1.02
ATG4D-212ENST00000590096 MMP12P39900 470 aa21.43■■□□□ 1.02
ATG4D-212ENST00000590096 EPHB1P54762 984 aa21.43■■□□□ 1.02
ATG4D-212ENST00000590096 IRX4P78413 519 aa21.43■■□□□ 1.02
ATG4D-212ENST00000590096 SKOR1P84550 965 aa21.43■■□□□ 1.02
ATG4D-212ENST00000590096 ZNF567Q8N184 647 aa21.43■■□□□ 1.02
ATG4D-212ENST00000590096 SKA1Q96BD8 255 aa21.43■■□□□ 1.02
ATG4D-212ENST00000590096 IMP4Q96G21 291 aaKnown RBP21.43■■□□□ 1.02
ATG4D-212ENST00000590096 RBM15Q96T37 977 aaKnown RBP eCLIP21.43■■□□□ 1.02
ATG4D-212ENST00000590096 WRAP53Q9BUR4 548 aaKnown RBP21.43■■□□□ 1.02
ATG4D-212ENST00000590096 FRMD8P1Q9BZ68 369 aaPredicted RBP21.43■■□□□ 1.02
ATG4D-212ENST00000590096 CAPN10Q9HC96 672 aa21.43■■□□□ 1.02
ATG4D-212ENST00000590096 R3HDM2Q9Y2K5 976 aaKnown RBP21.43■■□□□ 1.02
ATG4D-212ENST00000590096 SLCO1B1Q9Y6L6 691 aa21.43■■□□□ 1.02
ATG4D-212ENST00000590096 CEP104O60308 925 aa21.42■■□□□ 1.02
ATG4D-212ENST00000590096 FZD6O60353 706 aa21.42■■□□□ 1.02
ATG4D-212ENST00000590096 MMP20O60882 483 aa21.42■■□□□ 1.02
ATG4D-212ENST00000590096 TM7SF2O76062 418 aa21.42■■□□□ 1.02
ATG4D-212ENST00000590096 MMP2P08253 660 aa21.42■■□□□ 1.02
ATG4D-212ENST00000590096 CYP2A6P11509 494 aaPredicted RBP21.42■■□□□ 1.02
ATG4D-212ENST00000590096 NFKB1P19838 968 aa21.42■■□□□ 1.02
ATG4D-212ENST00000590096 HNRNPA2B1P22626 353 aaKnown RBP21.42■■□□□ 1.02
ATG4D-212ENST00000590096 GRIA4P48058 902 aa21.42■■□□□ 1.02
ATG4D-212ENST00000590096 LMNB2Q03252 620 aa21.42■■□□□ 1.02
ATG4D-212ENST00000590096 STAT4Q14765 748 aa21.42■■□□□ 1.02
ATG4D-212ENST00000590096 ITPRIPL1Q6GPH6 555 aa21.42■■□□□ 1.02
ATG4D-212ENST00000590096 USP45Q70EL2 814 aa21.42■■□□□ 1.02
ATG4D-212ENST00000590096 DPPA4Q7L190 304 aa21.42■■□□□ 1.02
ATG4D-212ENST00000590096 MAIP1Q8WWC4 291 aa21.42■■□□□ 1.02
ATG4D-212ENST00000590096 DOCK9Q9BZ29 2069 aa21.42■■□□□ 1.02
ATG4D-212ENST00000590096 PCDH9Q9HC56 1237 aa21.42■■□□□ 1.02
ATG4D-212ENST00000590096 CHKBQ9Y259 395 aa21.42■■□□□ 1.02
ATG4D-212ENST00000590096 LNP1A1A4G5 178 aa21.41■■□□□ 1.02
ATG4D-212ENST00000590096 PAK4O96013 591 aaPredicted RBP21.41■■□□□ 1.02
ATG4D-212ENST00000590096 FGGP02679 453 aa21.41■■□□□ 1.02
ATG4D-212ENST00000590096 PDHA1P08559 390 aa21.41■■□□□ 1.02
ATG4D-212ENST00000590096 CD38P28907 300 aa21.41■■□□□ 1.02
ATG4D-212ENST00000590096 CXCR5P32302 372 aa21.41■■□□□ 1.02
ATG4D-212ENST00000590096 CD68P34810 354 aaPredicted RBP21.41■■□□□ 1.02
ATG4D-212ENST00000590096 CSNK1EP49674 416 aaKnown RBP21.41■■□□□ 1.02
ATG4D-212ENST00000590096 ATXN3P54252 364 aaPredicted RBP21.41■■□□□ 1.02
ATG4D-212ENST00000590096 C21orf59P57076 290 aa21.41■■□□□ 1.02
ATG4D-212ENST00000590096 RPL26P61254 145 aaKnown RBP21.41■■□□□ 1.02
ATG4D-212ENST00000590096 SEMG2Q02383 582 aa21.41■■□□□ 1.02
ATG4D-212ENST00000590096 IHHQ14623 411 aa21.41■■□□□ 1.02
ATG4D-212ENST00000590096 SLC14A2Q15849 920 aa21.41■■□□□ 1.02
ATG4D-212ENST00000590096 LPCAT1Q8NF37 534 aa21.41■■□□□ 1.02
ATG4D-212ENST00000590096 PIH1D2Q8WWB5 315 aa21.41■■□□□ 1.02
ATG4D-212ENST00000590096 ASB12Q8WXK4 309 aa21.41■■□□□ 1.02
ATG4D-212ENST00000590096 MYOCQ99972 504 aa21.41■■□□□ 1.02
ATG4D-212ENST00000590096 EDEM2Q9BV94 578 aa21.41■■□□□ 1.02
ATG4D-212ENST00000590096 C1QTNF7Q9BXJ2 289 aa21.41■■□□□ 1.02
ATG4D-212ENST00000590096 C1QTNF2Q9BXJ5 285 aa21.41■■□□□ 1.02
ATG4D-212ENST00000590096 FZD3Q9NPG1 666 aa21.41■■□□□ 1.02
ATG4D-212ENST00000590096 B4GALT6Q9UBX8 382 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms