RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 NEK9Q8TD19 979 aa3.63□□□□□ -1.83
SMAD4-207ENST00000589076 ATOH1Q92858 354 aaPredicted RBP3.63□□□□□ -1.83
SMAD4-207ENST00000589076 NEUROG1Q92886 237 aa3.63□□□□□ -1.83
SMAD4-207ENST00000589076 MIB2Q96AX9 1013 aa3.63□□□□□ -1.83
SMAD4-207ENST00000589076 EME1Q96AY2 570 aa3.63□□□□□ -1.83
SMAD4-207ENST00000589076 HEMGNQ9BXL5 484 aa3.63□□□□□ -1.83
SMAD4-207ENST00000589076 SPATS2LQ9NUQ6 558 aaKnown RBP3.63□□□□□ -1.83
SMAD4-207ENST00000589076 NCKIPSDQ9NZQ3 722 aa3.63□□□□□ -1.83
SMAD4-207ENST00000589076 PLEKHB1Q9UF11 243 aaPredicted RBP3.63□□□□□ -1.83
SMAD4-207ENST00000589076 PCDHA12Q9UN75 941 aa3.63□□□□□ -1.83
SMAD4-207ENST00000589076 A4GNTQ9UNA3 340 aa3.63□□□□□ -1.83
SMAD4-207ENST00000589076 GAGE12JA6NER3 117 aa3.62□□□□□ -1.83
SMAD4-207ENST00000589076 DDTLA6NHG4 134 aaPredicted RBP3.62□□□□□ -1.83
SMAD4-207ENST00000589076 CBY3A6NI87 242 aa3.62□□□□□ -1.83
SMAD4-207ENST00000589076 ZNF814B7Z6K7 855 aa3.62□□□□□ -1.83
SMAD4-207ENST00000589076 TGFB1I1O43294 461 aa3.62□□□□□ -1.83
SMAD4-207ENST00000589076 SLC25A17O43808 307 aa3.62□□□□□ -1.83
SMAD4-207ENST00000589076 KLKB1P03952 638 aa3.62□□□□□ -1.83
SMAD4-207ENST00000589076 MMP3P08254 477 aa3.62□□□□□ -1.83
SMAD4-207ENST00000589076 FGF2P09038 288 aa3.62□□□□□ -1.83
SMAD4-207ENST00000589076 ACADMP11310 421 aa3.62□□□□□ -1.83
SMAD4-207ENST00000589076 LAMP2P13473 410 aa3.62□□□□□ -1.83
SMAD4-207ENST00000589076 NFKBIAP25963 317 aa3.62□□□□□ -1.83
SMAD4-207ENST00000589076 TNFSF8P32971 234 aa3.62□□□□□ -1.83
SMAD4-207ENST00000589076 RGS2P41220 211 aa3.62□□□□□ -1.83
SMAD4-207ENST00000589076 GNAQP50148 359 aa3.62□□□□□ -1.83
SMAD4-207ENST00000589076 GAD2Q05329 585 aa3.62□□□□□ -1.83
SMAD4-207ENST00000589076 PRKG2Q13237 762 aa3.62□□□□□ -1.83
SMAD4-207ENST00000589076 PLEKHO1Q53GL0 409 aaPredicted RBP3.62□□□□□ -1.83
SMAD4-207ENST00000589076 OTUD3Q5T2D3 398 aaPredicted RBP3.62□□□□□ -1.83
SMAD4-207ENST00000589076 TXNDC8Q6A555 127 aa3.62□□□□□ -1.83
SMAD4-207ENST00000589076 NADSYN1Q6IA69 706 aa3.62□□□□□ -1.83
SMAD4-207ENST00000589076 HMBOX1Q6NT76 420 aa3.62□□□□□ -1.83
SMAD4-207ENST00000589076 FBXL22Q6P050 247 aa3.62□□□□□ -1.83
SMAD4-207ENST00000589076 BRINP3Q76B58 766 aa3.62□□□□□ -1.83
SMAD4-207ENST00000589076 GSTA5Q7RTV2 222 aa3.62□□□□□ -1.83
SMAD4-207ENST00000589076 PXKQ7Z7A4 578 aa3.62□□□□□ -1.83
SMAD4-207ENST00000589076 TBC1D26Q86UD7 250 aa3.62□□□□□ -1.83
SMAD4-207ENST00000589076 FAM217AQ8IXS0 508 aa3.62□□□□□ -1.83
SMAD4-207ENST00000589076 CADM3Q8N126 398 aa3.62□□□□□ -1.83
SMAD4-207ENST00000589076 CNTROBQ8N137 903 aa3.62□□□□□ -1.83
SMAD4-207ENST00000589076 MCPH1Q8NEM0 835 aa3.62□□□□□ -1.83
SMAD4-207ENST00000589076 CADM4Q8NFZ8 388 aa3.62□□□□□ -1.83
SMAD4-207ENST00000589076 RASSF8Q8NHQ8 419 aa3.62□□□□□ -1.83
SMAD4-207ENST00000589076 BICD2Q8TD16 824 aa3.62□□□□□ -1.83
SMAD4-207ENST00000589076 SMARCE1Q969G3 411 aa3.62□□□□□ -1.83
SMAD4-207ENST00000589076 RNF183Q96D59 192 aa3.62□□□□□ -1.83
SMAD4-207ENST00000589076 MAP7D2Q96T17 732 aa3.62□□□□□ -1.83
SMAD4-207ENST00000589076 BARD1Q99728 777 aaKnown RBP3.62□□□□□ -1.83
SMAD4-207ENST00000589076 B3GNT4Q9C0J1 378 aa3.62□□□□□ -1.83
SMAD4-207ENST00000589076 MUC13Q9H3R2 512 aa3.62□□□□□ -1.83
SMAD4-207ENST00000589076 WDR6Q9NNW5 1121 aaKnown RBP3.62□□□□□ -1.83
SMAD4-207ENST00000589076 CD93Q9NPY3 652 aa3.62□□□□□ -1.83
SMAD4-207ENST00000589076 LYVE1Q9Y5Y7 322 aa3.62□□□□□ -1.83
SMAD4-207ENST00000589076 PIAS3Q9Y6X2 628 aa3.62□□□□□ -1.83
SMAD4-207ENST00000589076 A0A0G2JK05 382 aa3.61□□□□□ -1.83
SMAD4-207ENST00000589076 FSD2A1L4K1 749 aa3.61□□□□□ -1.83
SMAD4-207ENST00000589076 TYW5A2RUC4 315 aaKnown RBP3.61□□□□□ -1.83
SMAD4-207ENST00000589076 USP17L23D6RBM5 183 aa3.61□□□□□ -1.83
SMAD4-207ENST00000589076 STMND1H3BQB6 276 aa3.61□□□□□ -1.83
SMAD4-207ENST00000589076 ATG13O75143 517 aa3.61□□□□□ -1.83
SMAD4-207ENST00000589076 IFNA2P01563 188 aa3.61□□□□□ -1.83
SMAD4-207ENST00000589076 LDHCP07864 332 aa3.61□□□□□ -1.83
SMAD4-207ENST00000589076 CHRNB1P11230 501 aa3.61□□□□□ -1.83
SMAD4-207ENST00000589076 PLA2G2AP14555 144 aa3.61□□□□□ -1.83
SMAD4-207ENST00000589076 CTPS1P17812 591 aa3.61□□□□□ -1.83
SMAD4-207ENST00000589076 CDH2P19022 906 aaPredicted RBP3.61□□□□□ -1.83
SMAD4-207ENST00000589076 ARRB2P32121 409 aa3.61□□□□□ -1.83
SMAD4-207ENST00000589076 ICAM3P32942 547 aa3.61□□□□□ -1.83
SMAD4-207ENST00000589076 TTKP33981 857 aa3.61□□□□□ -1.83
SMAD4-207ENST00000589076 RYKP34925 604 aa3.61□□□□□ -1.83
SMAD4-207ENST00000589076 TMEM115Q12893 351 aaPredicted RBP3.61□□□□□ -1.83
SMAD4-207ENST00000589076 RNPS1Q15287 305 aaKnown RBP3.61□□□□□ -1.83
SMAD4-207ENST00000589076 HEPHL1Q6MZM0 1159 aa3.61□□□□□ -1.83
SMAD4-207ENST00000589076 FASTKD5Q7L8L6 764 aaKnown RBP3.61□□□□□ -1.83
SMAD4-207ENST00000589076 KIAA2013Q8IYS2 634 aa3.61□□□□□ -1.83
SMAD4-207ENST00000589076 RBFAQ8N0V3 343 aa3.61□□□□□ -1.83
SMAD4-207ENST00000589076 HORMAD2Q8N7B1 307 aa3.61□□□□□ -1.83
SMAD4-207ENST00000589076 LRRC57Q8N9N7 239 aa3.61□□□□□ -1.83
SMAD4-207ENST00000589076 ELP5Q8TE02 316 aa3.61□□□□□ -1.83
SMAD4-207ENST00000589076 TMEM174Q8WUU8 243 aa3.61□□□□□ -1.83
SMAD4-207ENST00000589076 TMEM255BQ8WV15 326 aa3.61□□□□□ -1.83
SMAD4-207ENST00000589076 USP6NLQ92738 828 aa3.61□□□□□ -1.83
SMAD4-207ENST00000589076 ARHGEF2Q92974 986 aaKnown RBP3.61□□□□□ -1.83
SMAD4-207ENST00000589076 FAM149B1Q96BN6 582 aa3.61□□□□□ -1.83
SMAD4-207ENST00000589076 MSI2Q96DH6 328 aaKnown RBP3.61□□□□□ -1.83
SMAD4-207ENST00000589076 PIP5K1AQ99755 562 aa3.61□□□□□ -1.83
SMAD4-207ENST00000589076 ITPAQ9BY32 194 aa3.61□□□□□ -1.83
SMAD4-207ENST00000589076 CDT1Q9H211 546 aa3.61□□□□□ -1.83
SMAD4-207ENST00000589076 EIF2B3Q9NR50 452 aaKnown RBP3.61□□□□□ -1.83
SMAD4-207ENST00000589076 HCFC1R1Q9NWW0 138 aa3.61□□□□□ -1.83
SMAD4-207ENST00000589076 PLK2Q9NYY3 685 aa3.61□□□□□ -1.83
SMAD4-207ENST00000589076 EHD2Q9NZN4 543 aa3.61□□□□□ -1.83
SMAD4-207ENST00000589076 LIMA1Q9UHB6 759 aaKnown RBP3.61□□□□□ -1.83
SMAD4-207ENST00000589076 HAO1Q9UJM8 370 aa3.61□□□□□ -1.83
SMAD4-207ENST00000589076 CARD8Q9Y2G2 431 aa3.61□□□□□ -1.83
SMAD4-207ENST00000589076 FAM96BQ9Y3D0 163 aa3.61□□□□□ -1.83
SMAD4-207ENST00000589076 KCNE2Q9Y6J6 123 aa3.61□□□□□ -1.83
SMAD4-207ENST00000589076 TCF20Q9UGU0 1960 aaKnown RBP3.61□□□□□ -1.83
SMAD4-207ENST00000589076 UTYO14607 1347 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms