RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 ZNF569Q5MCW4 686 aa11.67□□□□□ -0.54
RFX1-204ENST00000588885 DHRS13Q6UX07 377 aa11.67□□□□□ -0.54
RFX1-204ENST00000588885 POLNQ7Z5Q5 900 aa11.67□□□□□ -0.54
RFX1-204ENST00000588885 ABI3BPQ7Z7G0 1075 aa11.67□□□□□ -0.54
RFX1-204ENST00000588885 SRLQ86TD4 932 aa11.67□□□□□ -0.54
RFX1-204ENST00000588885 PSTKQ8IV42 348 aaKnown RBP11.67□□□□□ -0.54
RFX1-204ENST00000588885 SLC22A18ASQ8N1D0 253 aa11.67□□□□□ -0.54
RFX1-204ENST00000588885 SLC25A45Q8N413 288 aa11.67□□□□□ -0.54
RFX1-204ENST00000588885 OXR1Q8N573 874 aa11.67□□□□□ -0.54
RFX1-204ENST00000588885 PAF1Q8N7H5 531 aa11.67□□□□□ -0.54
RFX1-204ENST00000588885 KDF1Q8NAX2 398 aaPredicted RBP11.67□□□□□ -0.54
RFX1-204ENST00000588885 TPCN2Q8NHX9 752 aa11.67□□□□□ -0.54
RFX1-204ENST00000588885 CXorf40AQ8TE69 158 aa11.67□□□□□ -0.54
RFX1-204ENST00000588885 RAB7BQ96AH8 199 aa11.67□□□□□ -0.54
RFX1-204ENST00000588885 WDR24Q96S15 920 aa11.67□□□□□ -0.54
RFX1-204ENST00000588885 CINPQ9BW66 212 aaPredicted RBP11.67□□□□□ -0.54
RFX1-204ENST00000588885 C1QTNF2Q9BXJ5 285 aa11.67□□□□□ -0.54
RFX1-204ENST00000588885 SUV39H2Q9H5I1 410 aa11.67□□□□□ -0.54
RFX1-204ENST00000588885 KLHL11Q9NVR0 708 aa11.67□□□□□ -0.54
RFX1-204ENST00000588885 DNAJC28Q9NX36 388 aa11.67□□□□□ -0.54
RFX1-204ENST00000588885 UVRAGQ9P2Y5 699 aa11.67□□□□□ -0.54
RFX1-204ENST00000588885 COQ6Q9Y2Z9 468 aa11.67□□□□□ -0.54
RFX1-204ENST00000588885 HS3ST3A1Q9Y663 406 aa11.67□□□□□ -0.54
RFX1-204ENST00000588885 DOCK4Q8N1I0 1966 aa11.67□□□□□ -0.54
RFX1-204ENST00000588885 A6NNZ2 444 aa11.66□□□□□ -0.54
RFX1-204ENST00000588885 TRIM38O00635 465 aa11.66□□□□□ -0.54
RFX1-204ENST00000588885 FPGTO14772 594 aa11.66□□□□□ -0.54
RFX1-204ENST00000588885 AREL1O15033 823 aa11.66□□□□□ -0.54
RFX1-204ENST00000588885 MUSKO15146 869 aa11.66□□□□□ -0.54
RFX1-204ENST00000588885 SIGLEC6O43699 453 aa11.66□□□□□ -0.54
RFX1-204ENST00000588885 CD48P09326 243 aa11.66□□□□□ -0.54
RFX1-204ENST00000588885 MYF5P13349 255 aa11.66□□□□□ -0.54
RFX1-204ENST00000588885 TNNT1P13805 278 aa11.66□□□□□ -0.54
RFX1-204ENST00000588885 DGKAP23743 735 aa11.66□□□□□ -0.54
RFX1-204ENST00000588885 SCNN1BP51168 640 aa11.66□□□□□ -0.54
RFX1-204ENST00000588885 CDH6P55285 790 aa11.66□□□□□ -0.54
RFX1-204ENST00000588885 ACAP1Q15027 740 aa11.66□□□□□ -0.54
RFX1-204ENST00000588885 DPYSL2Q16555 572 aa11.66□□□□□ -0.54
RFX1-204ENST00000588885 ATP13A4Q4VNC1 1196 aa11.66□□□□□ -0.54
RFX1-204ENST00000588885 TPRG1LQ5T0D9 272 aa11.66□□□□□ -0.54
RFX1-204ENST00000588885 CFAP58Q5T655 872 aa11.66□□□□□ -0.54
RFX1-204ENST00000588885 TMCO3Q6UWJ1 677 aa11.66□□□□□ -0.54
RFX1-204ENST00000588885 SYT10Q6XYQ8 523 aa11.66□□□□□ -0.54
RFX1-204ENST00000588885 KANSL1Q7Z3B3 1105 aa11.66□□□□□ -0.54
RFX1-204ENST00000588885 ZSWIM9Q86XI8 627 aa11.66□□□□□ -0.54
RFX1-204ENST00000588885 CSPG4P5Q96PW8 444 aa11.66□□□□□ -0.54
RFX1-204ENST00000588885 ALS2CR12Q96Q35 445 aa11.66□□□□□ -0.54
RFX1-204ENST00000588885 KLF6Q99612 283 aaPredicted RBP11.66□□□□□ -0.54
RFX1-204ENST00000588885 CPEB1Q9BZB8 566 aaKnown RBP11.66□□□□□ -0.54
RFX1-204ENST00000588885 PCDH18Q9HCL0 1135 aa11.66□□□□□ -0.54
RFX1-204ENST00000588885 PCDH12Q9NPG4 1184 aa11.66□□□□□ -0.54
RFX1-204ENST00000588885 MBNL1Q9NR56 388 aaKnown RBP11.66□□□□□ -0.54
RFX1-204ENST00000588885 DKK3Q9UBP4 350 aa11.66□□□□□ -0.54
RFX1-204ENST00000588885 ADAMTS20P59510 1910 aa11.66□□□□□ -0.54
RFX1-204ENST00000588885 MYLKQ15746 1914 aa11.66□□□□□ -0.54
RFX1-204ENST00000588885 DSPP15924 2871 aaKnown RBP11.65□□□□□ -0.54
RFX1-204ENST00000588885 FAM221BA6H8Z2 402 aa11.65□□□□□ -0.54
RFX1-204ENST00000588885 SRRM3A6NNA2 597 aaPredicted RBP11.65□□□□□ -0.54
RFX1-204ENST00000588885 A8MX80 341 aa11.65□□□□□ -0.54
RFX1-204ENST00000588885 NEBLO76041 1014 aa11.65□□□□□ -0.54
RFX1-204ENST00000588885 FTCDO95954 541 aa11.65□□□□□ -0.54
RFX1-204ENST00000588885 HADHBP55084 474 aaKnown RBP11.65□□□□□ -0.54
RFX1-204ENST00000588885 ETF1P62495 437 aaKnown RBP11.65□□□□□ -0.54
RFX1-204ENST00000588885 SLC25A11Q02978 314 aaKnown RBP11.65□□□□□ -0.54
RFX1-204ENST00000588885 IL10RBQ08334 325 aa11.65□□□□□ -0.54
RFX1-204ENST00000588885 SLC10A7Q0GE19 358 aa11.65□□□□□ -0.54
RFX1-204ENST00000588885 PDE1CQ14123 709 aaPredicted RBP11.65□□□□□ -0.54
RFX1-204ENST00000588885 FZD2Q14332 565 aa11.65□□□□□ -0.54
RFX1-204ENST00000588885 LBRQ14739 615 aaKnown RBP11.65□□□□□ -0.54
RFX1-204ENST00000588885 C11orf63Q6NUN7 778 aa11.65□□□□□ -0.54
RFX1-204ENST00000588885 CCNI2Q6ZMN8 369 aaPredicted RBP11.65□□□□□ -0.54
RFX1-204ENST00000588885 RNF10Q8N5U6 811 aaKnown RBP11.65□□□□□ -0.54
RFX1-204ENST00000588885 LRRC57Q8N9N7 239 aa11.65□□□□□ -0.54
RFX1-204ENST00000588885 NSMCE3Q96MG7 304 aa11.65□□□□□ -0.54
RFX1-204ENST00000588885 LENG8Q96PV6 779 aaPredicted RBP11.65□□□□□ -0.54
RFX1-204ENST00000588885 CCDC86Q9H6F5 360 aaKnown RBP11.65□□□□□ -0.54
RFX1-204ENST00000588885 HYOU1Q9Y4L1 999 aa11.65□□□□□ -0.54
RFX1-204ENST00000588885 CACNA1GO43497 2377 aa11.65□□□□□ -0.54
RFX1-204ENST00000588885 ZFHX4Q86UP3 3567 aa11.65□□□□□ -0.54
RFX1-204ENST00000588885 ACACAQ13085 2346 aa11.65□□□□□ -0.54
RFX1-204ENST00000588885 LAMA5O15230 3695 aa11.65□□□□□ -0.54
RFX1-204ENST00000588885 SPTY2D1-AS1A0A0U1RR47 76 aa11.64□□□□□ -0.55
RFX1-204ENST00000588885 TM7SF2O76062 418 aa11.64□□□□□ -0.55
RFX1-204ENST00000588885 DKK1O94907 266 aa11.64□□□□□ -0.55
RFX1-204ENST00000588885 IL4RP24394 825 aa11.64□□□□□ -0.55
RFX1-204ENST00000588885 RABIFP47224 123 aa11.64□□□□□ -0.55
RFX1-204ENST00000588885 LIG3P49916 1009 aa11.64□□□□□ -0.55
RFX1-204ENST00000588885 ZNF135P52742 658 aaPredicted RBP11.64□□□□□ -0.55
RFX1-204ENST00000588885 TAS2R40P59535 323 aa11.64□□□□□ -0.55
RFX1-204ENST00000588885 BCL2L1Q07817 233 aa11.64□□□□□ -0.55
RFX1-204ENST00000588885 MESDQ14696 234 aa11.64□□□□□ -0.55
RFX1-204ENST00000588885 TCEA2Q15560 299 aa11.64□□□□□ -0.55
RFX1-204ENST00000588885 IFI16Q16666 785 aaKnown RBP11.64□□□□□ -0.55
RFX1-204ENST00000588885 HADHQ16836 314 aaKnown RBP11.64□□□□□ -0.55
RFX1-204ENST00000588885 UGP2Q16851 508 aa11.64□□□□□ -0.55
RFX1-204ENST00000588885 TMEM52BQ4KMG9 183 aa11.64□□□□□ -0.55
RFX1-204ENST00000588885 ZFYVE27Q5T4F4 411 aa11.64□□□□□ -0.55
RFX1-204ENST00000588885 ERAP2Q6P179 960 aa11.64□□□□□ -0.55
RFX1-204ENST00000588885 KYAT3Q6YP21 454 aaKnown RBP11.64□□□□□ -0.55
RFX1-204ENST00000588885 TMPRSS7Q7RTY8 843 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms