RNA–Protein interactions for RNA: ENST00000588237.5

GRN-213, Transcript of granulin precursor, human

TSL 5

Gene GRN, Length 558 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GRN-213	ENST00000588237	IGFALS	P35858	605 aa		13.37	□□□□□ -0.27
GRN-213	ENST00000588237	CSNK1D	P48730	415 aa		13.37	□□□□□ -0.27
GRN-213	ENST00000588237	POLR2L	P62875	67 aa	Known RBP	13.37	□□□□□ -0.27
GRN-213	ENST00000588237	NSUN2	Q08J23	767 aa	Known RBP eCLIP	13.37	□□□□□ -0.27
GRN-213	ENST00000588237	FZD2	Q14332	565 aa		13.37	□□□□□ -0.27
GRN-213	ENST00000588237	MESD	Q14696	234 aa		13.37	□□□□□ -0.27
GRN-213	ENST00000588237	LRRC14	Q15048	493 aa		13.37	□□□□□ -0.27
GRN-213	ENST00000588237	TMEM52B	Q4KMG9	183 aa		13.37	□□□□□ -0.27
GRN-213	ENST00000588237	ATP13A4	Q4VNC1	1196 aa		13.37	□□□□□ -0.27
GRN-213	ENST00000588237	TMPRSS7	Q7RTY8	843 aa		13.37	□□□□□ -0.27
GRN-213	ENST00000588237	KANSL1	Q7Z3B3	1105 aa		13.37	□□□□□ -0.27
GRN-213	ENST00000588237	MARCH9	Q86YJ5	346 aa		13.37	□□□□□ -0.27
GRN-213	ENST00000588237	CPNE8	Q86YQ8	564 aa		13.37	□□□□□ -0.27
GRN-213	ENST00000588237	MAP7D3	Q8IWC1	876 aa		13.37	□□□□□ -0.27
GRN-213	ENST00000588237	IFT43	Q96FT9	208 aa		13.37	□□□□□ -0.27
GRN-213	ENST00000588237	ZNF599	Q96NL3	588 aa		13.37	□□□□□ -0.27
GRN-213	ENST00000588237	CHP1	Q99653	195 aa		13.37	□□□□□ -0.27
GRN-213	ENST00000588237	TRIM5	Q9C035	493 aa		13.37	□□□□□ -0.27
GRN-213	ENST00000588237	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	13.37	□□□□□ -0.27
GRN-213	ENST00000588237	SCUBE2	Q9NQ36	999 aa		13.37	□□□□□ -0.27
GRN-213	ENST00000588237	SPTLC3	Q9NUV7	552 aa		13.37	□□□□□ -0.27
GRN-213	ENST00000588237	LCMT1	Q9UIC8	334 aa		13.37	□□□□□ -0.27
GRN-213	ENST00000588237	ATP8A1	Q9Y2Q0	1164 aa		13.37	□□□□□ -0.27
GRN-213	ENST00000588237	RAX	Q9Y2V3	346 aa		13.37	□□□□□ -0.27
GRN-213	ENST00000588237	PCDHGA1	Q9Y5H4	931 aa		13.37	□□□□□ -0.27
GRN-213	ENST00000588237	GCN1	Q92616	2671 aa	Known RBP	13.37	□□□□□ -0.27
GRN-213	ENST00000588237	MYLK	Q15746	1914 aa		13.37	□□□□□ -0.27
GRN-213	ENST00000588237		A8MX80	341 aa		13.36	□□□□□ -0.27
GRN-213	ENST00000588237	AKR1B15	C9JRZ8	316 aa	Predicted RBP	13.36	□□□□□ -0.27
GRN-213	ENST00000588237	TRIM38	O00635	465 aa		13.36	□□□□□ -0.27
GRN-213	ENST00000588237	RIOK3	O14730	519 aa	Known RBP	13.36	□□□□□ -0.27
GRN-213	ENST00000588237	MUSK	O15146	869 aa		13.36	□□□□□ -0.27
GRN-213	ENST00000588237	DKK1	O94907	266 aa		13.36	□□□□□ -0.27
GRN-213	ENST00000588237	CSF2	P04141	144 aa		13.36	□□□□□ -0.27
GRN-213	ENST00000588237	KRT7	P08729	469 aa		13.36	□□□□□ -0.27
GRN-213	ENST00000588237	TMEM253	P0C7T8	217 aa		13.36	□□□□□ -0.27
GRN-213	ENST00000588237	C6	P13671	934 aa		13.36	□□□□□ -0.27
GRN-213	ENST00000588237	JUP	P14923	745 aa		13.36	□□□□□ -0.27
GRN-213	ENST00000588237	HNF1B	P35680	557 aa		13.36	□□□□□ -0.27
GRN-213	ENST00000588237	ACADVL	P49748	655 aa		13.36	□□□□□ -0.27
GRN-213	ENST00000588237	LIG3	P49916	1009 aa		13.36	□□□□□ -0.27
GRN-213	ENST00000588237	MAX	P61244	160 aa		13.36	□□□□□ -0.27
GRN-213	ENST00000588237	AP1S1	P61966	158 aa		13.36	□□□□□ -0.27
GRN-213	ENST00000588237	ITK	Q08881	620 aa		13.36	□□□□□ -0.27
GRN-213	ENST00000588237	ZNF211	Q13398	564 aa	Predicted RBP	13.36	□□□□□ -0.27
GRN-213	ENST00000588237	IRF4	Q15306	451 aa		13.36	□□□□□ -0.27
GRN-213	ENST00000588237	MARC1	Q5VT66	337 aa		13.36	□□□□□ -0.27
GRN-213	ENST00000588237	ZSWIM9	Q86XI8	627 aa		13.36	□□□□□ -0.27
GRN-213	ENST00000588237	CNGA4	Q8IV77	575 aa		13.36	□□□□□ -0.27
GRN-213	ENST00000588237	LMX1A	Q8TE12	382 aa		13.36	□□□□□ -0.27
GRN-213	ENST00000588237	CENPT	Q96BT3	561 aa		13.36	□□□□□ -0.27
GRN-213	ENST00000588237	PSKH2	Q96QS6	385 aa		13.36	□□□□□ -0.27
GRN-213	ENST00000588237	ANP32E	Q9BTT0	268 aa		13.36	□□□□□ -0.27
GRN-213	ENST00000588237	MBNL1	Q9NR56	388 aa	Known RBP	13.36	□□□□□ -0.27
GRN-213	ENST00000588237	RCOR3	Q9P2K3	495 aa	Predicted RBP	13.36	□□□□□ -0.27
GRN-213	ENST00000588237	NENF	Q9UMX5	172 aa		13.36	□□□□□ -0.27
GRN-213	ENST00000588237	FLNB	O75369	2602 aa	Known RBP	13.36	□□□□□ -0.27
GRN-213	ENST00000588237	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	13.35	□□□□□ -0.27
GRN-213	ENST00000588237	TSPAN11	A1L157	253 aa		13.35	□□□□□ -0.27
GRN-213	ENST00000588237	MAFK	O60675	156 aa		13.35	□□□□□ -0.27
GRN-213	ENST00000588237	MAP3K6	O95382	1288 aa		13.35	□□□□□ -0.27
GRN-213	ENST00000588237	PCCB	P05166	539 aa		13.35	□□□□□ -0.27
GRN-213	ENST00000588237	C1S	P09871	688 aa		13.35	□□□□□ -0.27
GRN-213	ENST00000588237	ELFN1	P0C7U0	828 aa		13.35	□□□□□ -0.27
GRN-213	ENST00000588237	CDK4	P11802	303 aa		13.35	□□□□□ -0.27
GRN-213	ENST00000588237	NME1	P15531	152 aa	Known RBP	13.35	□□□□□ -0.27
GRN-213	ENST00000588237	HSPA9	P38646	679 aa	Known RBP	13.35	□□□□□ -0.27
GRN-213	ENST00000588237	MMP13	P45452	471 aa		13.35	□□□□□ -0.27
GRN-213	ENST00000588237	CLDN6	P56747	220 aa		13.35	□□□□□ -0.27
GRN-213	ENST00000588237	TAS2R40	P59535	323 aa		13.35	□□□□□ -0.27
GRN-213	ENST00000588237	PFN3	P60673	137 aa		13.35	□□□□□ -0.27
GRN-213	ENST00000588237	YPEL5	P62699	121 aa		13.35	□□□□□ -0.27
GRN-213	ENST00000588237	DPYSL3	Q14195	570 aa		13.35	□□□□□ -0.27
GRN-213	ENST00000588237	PDK2	Q15119	407 aa		13.35	□□□□□ -0.27
GRN-213	ENST00000588237	ASTE1	Q2TB18	679 aa	Predicted RBP	13.35	□□□□□ -0.27
GRN-213	ENST00000588237	PROX2	Q3B8N5	592 aa		13.35	□□□□□ -0.27
GRN-213	ENST00000588237	ODF2	Q5BJF6	829 aa		13.35	□□□□□ -0.27
GRN-213	ENST00000588237	ANKRD20A8P	Q5CZ79	823 aa		13.35	□□□□□ -0.27
GRN-213	ENST00000588237	TPRG1L	Q5T0D9	272 aa		13.35	□□□□□ -0.27
GRN-213	ENST00000588237	FAXC	Q5TGI0	409 aa		13.35	□□□□□ -0.27
GRN-213	ENST00000588237	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	13.35	□□□□□ -0.27
GRN-213	ENST00000588237	TP53I13	Q8NBR0	393 aa	Predicted RBP	13.35	□□□□□ -0.27
GRN-213	ENST00000588237	ZNF548	Q8NEK5	533 aa	Predicted RBP	13.35	□□□□□ -0.27
GRN-213	ENST00000588237	OR4C6	Q8NH72	309 aa		13.35	□□□□□ -0.27
GRN-213	ENST00000588237	SLC35G2	Q8TBE7	412 aa		13.35	□□□□□ -0.27
GRN-213	ENST00000588237	BTN2A2	Q8WVV5	523 aa		13.35	□□□□□ -0.27
GRN-213	ENST00000588237	TSC1	Q92574	1164 aa		13.35	□□□□□ -0.27
GRN-213	ENST00000588237	IL12RB2	Q99665	862 aa		13.35	□□□□□ -0.27
GRN-213	ENST00000588237	DUSP23	Q9BVJ7	150 aa		13.35	□□□□□ -0.27
GRN-213	ENST00000588237	NT5M	Q9NPB1	228 aa		13.35	□□□□□ -0.27
GRN-213	ENST00000588237	EVA1B	Q9NVM1	165 aa		13.35	□□□□□ -0.27
GRN-213	ENST00000588237	NLGN3	Q9NZ94	848 aa		13.35	□□□□□ -0.27
GRN-213	ENST00000588237	DKK4	Q9UBT3	224 aa		13.35	□□□□□ -0.27
GRN-213	ENST00000588237	APOBEC3B	Q9UH17	382 aa	Known RBP	13.35	□□□□□ -0.27
GRN-213	ENST00000588237	TTLL3	Q9Y4R7	772 aa		13.35	□□□□□ -0.27
GRN-213	ENST00000588237	PCDHGC4	Q9Y5F7	938 aa		13.35	□□□□□ -0.27
GRN-213	ENST00000588237	HELZ2	Q9BYK8	2649 aa	Known RBP	13.35	□□□□□ -0.27
GRN-213	ENST00000588237	CELSR3	Q9NYQ7	3312 aa		13.34	□□□□□ -0.27
GRN-213	ENST00000588237	SCAMP1	O15126	338 aa		13.34	□□□□□ -0.27
GRN-213	ENST00000588237	AQP9	O43315	295 aa		13.34	□□□□□ -0.27

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