RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 IL1R2P27930 398 aa14.45□□□□□ -0.1
VMP1-206ENST00000587945 ACTN2P35609 894 aa14.45□□□□□ -0.1
VMP1-206ENST00000587945 SUOXP51687 545 aa14.45□□□□□ -0.1
VMP1-206ENST00000587945 GABREP78334 506 aa14.45□□□□□ -0.1
VMP1-206ENST00000587945 PPARDQ03181 441 aa14.45□□□□□ -0.1
VMP1-206ENST00000587945 INPP5AQ14642 412 aa14.45□□□□□ -0.1
VMP1-206ENST00000587945 GRM3Q14832 879 aa14.45□□□□□ -0.1
VMP1-206ENST00000587945 NR1I3Q14994 352 aa14.45□□□□□ -0.1
VMP1-206ENST00000587945 IQCB1Q15051 598 aa14.45□□□□□ -0.1
VMP1-206ENST00000587945 ALG11Q2TAA5 492 aa14.45□□□□□ -0.1
VMP1-206ENST00000587945 KCTD16Q68DU8 428 aa14.45□□□□□ -0.1
VMP1-206ENST00000587945 ERAP2Q6P179 960 aa14.45□□□□□ -0.1
VMP1-206ENST00000587945 BRAT1Q6PJG6 821 aa14.45□□□□□ -0.1
VMP1-206ENST00000587945 ENPP7Q6UWV6 458 aa14.45□□□□□ -0.1
VMP1-206ENST00000587945 RD3Q7Z3Z2 195 aa14.45□□□□□ -0.1
VMP1-206ENST00000587945 HID1Q8IV36 788 aa14.45□□□□□ -0.1
VMP1-206ENST00000587945 FNIP1Q8TF40 1166 aa14.45□□□□□ -0.1
VMP1-206ENST00000587945 NAF1Q96HR8 494 aaKnown RBP14.45□□□□□ -0.1
VMP1-206ENST00000587945 APOOQ9BUR5 198 aa14.45□□□□□ -0.1
VMP1-206ENST00000587945 CINPQ9BW66 212 aaPredicted RBP14.45□□□□□ -0.1
VMP1-206ENST00000587945 BOCQ9BWV1 1114 aa14.45□□□□□ -0.1
VMP1-206ENST00000587945 ATP13A3Q9H7F0 1226 aa14.45□□□□□ -0.1
VMP1-206ENST00000587945 ATP8A1Q9Y2Q0 1164 aa14.45□□□□□ -0.1
VMP1-206ENST00000587945 ASXL3Q9C0F0 2248 aa14.45□□□□□ -0.1
VMP1-206ENST00000587945 A0A1W2PNU3 283 aaPredicted RBP14.44□□□□□ -0.1
VMP1-206ENST00000587945 A8MX80 341 aa14.44□□□□□ -0.1
VMP1-206ENST00000587945 EIF3CLB5ME19 914 aaKnown RBP14.44□□□□□ -0.1
VMP1-206ENST00000587945 SERPINC1P01008 464 aa14.44□□□□□ -0.1
VMP1-206ENST00000587945 SERPINA4P29622 427 aa14.44□□□□□ -0.1
VMP1-206ENST00000587945 MMP12P39900 470 aa14.44□□□□□ -0.1
VMP1-206ENST00000587945 CSNK1DP48730 415 aa14.44□□□□□ -0.1
VMP1-206ENST00000587945 RALGDSQ12967 914 aa14.44□□□□□ -0.1
VMP1-206ENST00000587945 DPYSQ14117 519 aa14.44□□□□□ -0.1
VMP1-206ENST00000587945 ISXQ2M1V0 245 aa14.44□□□□□ -0.1
VMP1-206ENST00000587945 SMTNL2Q2TAL5 461 aa14.44□□□□□ -0.1
VMP1-206ENST00000587945 C6orf132Q5T0Z8 1188 aa14.44□□□□□ -0.1
VMP1-206ENST00000587945 PLA2G15Q8NCC3 412 aa14.44□□□□□ -0.1
VMP1-206ENST00000587945 TUBGCP5Q96RT8 1024 aa14.44□□□□□ -0.1
VMP1-206ENST00000587945 EIF3CQ99613 913 aaKnown RBP14.44□□□□□ -0.1
VMP1-206ENST00000587945 PRORYQ9H606 182 aa14.44□□□□□ -0.1
VMP1-206ENST00000587945 ETNK2Q9NVF9 386 aa14.44□□□□□ -0.1
VMP1-206ENST00000587945 NCKIPSDQ9NZQ3 722 aa14.44□□□□□ -0.1
VMP1-206ENST00000587945 SIRPGQ9P1W8 387 aa14.44□□□□□ -0.1
VMP1-206ENST00000587945 GULP1Q9UBP9 304 aa14.44□□□□□ -0.1
VMP1-206ENST00000587945 SCINQ9Y6U3 715 aa14.44□□□□□ -0.1
VMP1-206ENST00000587945 CHD5Q8TDI0 1954 aa14.43□□□□□ -0.1
VMP1-206ENST00000587945 TOR1BO14657 336 aa14.43□□□□□ -0.1
VMP1-206ENST00000587945 CTSEP14091 401 aa14.43□□□□□ -0.1
VMP1-206ENST00000587945 AMPD1P23109 780 aa14.43□□□□□ -0.1
VMP1-206ENST00000587945 HCAR3P49019 387 aa14.43□□□□□ -0.1
VMP1-206ENST00000587945 RPIAP49247 311 aa14.43□□□□□ -0.1
VMP1-206ENST00000587945 PEX5P50542 639 aa14.43□□□□□ -0.1
VMP1-206ENST00000587945 SCNN1BP51168 640 aa14.43□□□□□ -0.1
VMP1-206ENST00000587945 HK3P52790 923 aa14.43□□□□□ -0.1
VMP1-206ENST00000587945 BCL2L1Q07817 233 aa14.43□□□□□ -0.1
VMP1-206ENST00000587945 IL10RBQ08334 325 aa14.43□□□□□ -0.1
VMP1-206ENST00000587945 NFATC4Q14934 902 aa14.43□□□□□ -0.1
VMP1-206ENST00000587945 TXNRD3NBQ6F5E7 133 aa14.43□□□□□ -0.1
VMP1-206ENST00000587945 PSTKQ8IV42 348 aaKnown RBP14.43□□□□□ -0.1
VMP1-206ENST00000587945 SPACA3Q8IXA5 215 aa14.43□□□□□ -0.1
VMP1-206ENST00000587945 PAF1Q8N7H5 531 aa14.43□□□□□ -0.1
VMP1-206ENST00000587945 HSPH1Q92598 858 aa14.43□□□□□ -0.1
VMP1-206ENST00000587945 GLMNQ92990 594 aa14.43□□□□□ -0.1
VMP1-206ENST00000587945 ECHDC3Q96DC8 303 aa14.43□□□□□ -0.1
VMP1-206ENST00000587945 ATXN7L3BQ96GX2 97 aa14.43□□□□□ -0.1
VMP1-206ENST00000587945 BTBD6Q96KE9 485 aa14.43□□□□□ -0.1
VMP1-206ENST00000587945 TBATAQ96M53 351 aa14.43□□□□□ -0.1
VMP1-206ENST00000587945 FUCA2Q9BTY2 467 aa14.43□□□□□ -0.1
VMP1-206ENST00000587945 EDEM3Q9BZQ6 932 aa14.43□□□□□ -0.1
VMP1-206ENST00000587945 ISCUQ9H1K1 167 aa14.43□□□□□ -0.1
VMP1-206ENST00000587945 ZWILCHQ9H900 591 aa14.43□□□□□ -0.1
VMP1-206ENST00000587945 POLR1BQ9H9Y6 1135 aa14.43□□□□□ -0.1
VMP1-206ENST00000587945 PADI4Q9UM07 663 aa14.43□□□□□ -0.1
VMP1-206ENST00000587945 DOLKQ9UPQ8 538 aa14.43□□□□□ -0.1
VMP1-206ENST00000587945 TDRD6O60522 2096 aaKnown RBP14.42□□□□□ -0.1
VMP1-206ENST00000587945 PMS2P1A4D2B8 440 aa14.42□□□□□ -0.1
VMP1-206ENST00000587945 TMEM110-MUSTN1A8MSY1 372 aa14.42□□□□□ -0.1
VMP1-206ENST00000587945 H3BRJ5 948 aa14.42□□□□□ -0.1
VMP1-206ENST00000587945 TRAFD1O14545 582 aaPredicted RBP14.42□□□□□ -0.1
VMP1-206ENST00000587945 RECQL5O94762 991 aaPredicted RBP14.42□□□□□ -0.1
VMP1-206ENST00000587945 RASGRP1O95267 797 aa14.42□□□□□ -0.1
VMP1-206ENST00000587945 MYBL1P10243 752 aa14.42□□□□□ -0.1
VMP1-206ENST00000587945 HTR1BP28222 390 aa14.42□□□□□ -0.1
VMP1-206ENST00000587945 PCK1P35558 622 aa14.42□□□□□ -0.1
VMP1-206ENST00000587945 LSSP48449 732 aa14.42□□□□□ -0.1
VMP1-206ENST00000587945 BLKP51451 505 aa14.42□□□□□ -0.1
VMP1-206ENST00000587945 SRP54P61011 504 aaKnown RBP14.42□□□□□ -0.1
VMP1-206ENST00000587945 TLE3Q04726 772 aa14.42□□□□□ -0.1
VMP1-206ENST00000587945 NSUN2Q08J23 767 aaKnown RBP eCLIP14.42□□□□□ -0.1
VMP1-206ENST00000587945 SLC10A7Q0GE19 358 aa14.42□□□□□ -0.1
VMP1-206ENST00000587945 RFTN1Q14699 578 aaPredicted RBP14.42□□□□□ -0.1
VMP1-206ENST00000587945 LBRQ14739 615 aaKnown RBP14.42□□□□□ -0.1
VMP1-206ENST00000587945 TDRD12Q587J7 1177 aaKnown RBP14.42□□□□□ -0.1
VMP1-206ENST00000587945 C3orf38Q5JPI3 329 aa14.42□□□□□ -0.1
VMP1-206ENST00000587945 HGSNATQ68CP4 663 aa14.42□□□□□ -0.1
VMP1-206ENST00000587945 ESRP1Q6NXG1 681 aaKnown RBP14.42□□□□□ -0.1
VMP1-206ENST00000587945 LIPIQ6XZB0 460 aa14.42□□□□□ -0.1
VMP1-206ENST00000587945 RBM44Q6ZP01 1051 aaKnown RBP14.42□□□□□ -0.1
VMP1-206ENST00000587945 KYQ8NBH2 561 aa14.42□□□□□ -0.1
VMP1-206ENST00000587945 PCDH19Q8TAB3 1148 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms