RNA–Protein interactions for RNA: ENST00000587818.1

TRAPPC6A-203, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2

Gene TRAPPC6A, Length 433 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-203ENST00000587818 PDCD6IPQ8WUM4 868 aaKnown RBP20.18■□□□□ 0.82
TRAPPC6A-203ENST00000587818 TRIM5Q9C035 493 aa20.18■□□□□ 0.82
TRAPPC6A-203ENST00000587818 NOD2Q9HC29 1040 aa20.18■□□□□ 0.82
TRAPPC6A-203ENST00000587818 SCUBE2Q9NQ36 999 aa20.18■□□□□ 0.82
TRAPPC6A-203ENST00000587818 PNMA8BQ9ULN7 279 aaPredicted RBP20.18■□□□□ 0.82
TRAPPC6A-203ENST00000587818 TRAFD1O14545 582 aaPredicted RBP20.17■□□□□ 0.82
TRAPPC6A-203ENST00000587818 MFSD11O43934 449 aa20.17■□□□□ 0.82
TRAPPC6A-203ENST00000587818 RFPL3O75679 317 aa20.17■□□□□ 0.82
TRAPPC6A-203ENST00000587818 CSF2P04141 144 aa20.17■□□□□ 0.82
TRAPPC6A-203ENST00000587818 JUNDP17535 347 aa20.17■□□□□ 0.82
TRAPPC6A-203ENST00000587818 THOP1P52888 689 aa20.17■□□□□ 0.82
TRAPPC6A-203ENST00000587818 HNRNPKP61978 463 aaKnown RBP eCLIP20.17■□□□□ 0.82
TRAPPC6A-203ENST00000587818 ZNF211Q13398 564 aaPredicted RBP20.17■□□□□ 0.82
TRAPPC6A-203ENST00000587818 C1orf61Q13536 156 aa20.17■□□□□ 0.82
TRAPPC6A-203ENST00000587818 LRRC14Q15048 493 aa20.17■□□□□ 0.82
TRAPPC6A-203ENST00000587818 PTPRRQ15256 657 aa20.17■□□□□ 0.82
TRAPPC6A-203ENST00000587818 SMAD1Q15797 465 aaKnown RBP20.17■□□□□ 0.82
TRAPPC6A-203ENST00000587818 FAM182AQ5T1J6 154 aa20.17■□□□□ 0.82
TRAPPC6A-203ENST00000587818 MARC1Q5VT66 337 aa20.17■□□□□ 0.82
TRAPPC6A-203ENST00000587818 NCBP2-AS2Q69YL0 99 aa20.17■□□□□ 0.82
TRAPPC6A-203ENST00000587818 PARGQ86W56 976 aa20.17■□□□□ 0.82
TRAPPC6A-203ENST00000587818 RBFAQ8N0V3 343 aa20.17■□□□□ 0.82
TRAPPC6A-203ENST00000587818 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.17■□□□□ 0.82
TRAPPC6A-203ENST00000587818 OR4C6Q8NH72 309 aa20.17■□□□□ 0.82
TRAPPC6A-203ENST00000587818 LMX1AQ8TE12 382 aa20.17■□□□□ 0.82
TRAPPC6A-203ENST00000587818 ZCCHC14Q8WYQ9 949 aaKnown RBP20.17■□□□□ 0.82
TRAPPC6A-203ENST00000587818 RAPGEF5Q92565 580 aa20.17■□□□□ 0.82
TRAPPC6A-203ENST00000587818 ECHDC3Q96DC8 303 aa20.17■□□□□ 0.82
TRAPPC6A-203ENST00000587818 IFT43Q96FT9 208 aa20.17■□□□□ 0.82
TRAPPC6A-203ENST00000587818 C1QTNF7Q9BXJ2 289 aa20.17■□□□□ 0.82
TRAPPC6A-203ENST00000587818 NT5MQ9NPB1 228 aa20.17■□□□□ 0.82
TRAPPC6A-203ENST00000587818 IGF2RP11717 2491 aa20.17■□□□□ 0.82
TRAPPC6A-203ENST00000587818 USP24Q9UPU5 2620 aa20.17■□□□□ 0.82
TRAPPC6A-203ENST00000587818 TAF4O00268 1085 aa20.16■□□□□ 0.82
TRAPPC6A-203ENST00000587818 NME1P15531 152 aaKnown RBP20.16■□□□□ 0.82
TRAPPC6A-203ENST00000587818 CR2P20023 1033 aa20.16■□□□□ 0.82
TRAPPC6A-203ENST00000587818 SERPINB6P35237 376 aa20.16■□□□□ 0.82
TRAPPC6A-203ENST00000587818 MMP12P39900 470 aa20.16■□□□□ 0.82
TRAPPC6A-203ENST00000587818 MMP13P45452 471 aa20.16■□□□□ 0.82
TRAPPC6A-203ENST00000587818 AP1S1P61966 158 aa20.16■□□□□ 0.82
TRAPPC6A-203ENST00000587818 DAB2P98082 770 aa20.16■□□□□ 0.82
TRAPPC6A-203ENST00000587818 RALGDSQ12967 914 aa20.16■□□□□ 0.82
TRAPPC6A-203ENST00000587818 GALNT15Q8N3T1 639 aa20.16■□□□□ 0.82
TRAPPC6A-203ENST00000587818 PQLC3Q8N755 202 aa20.16■□□□□ 0.82
TRAPPC6A-203ENST00000587818 NSMCE1Q8WV22 266 aa20.16■□□□□ 0.82
TRAPPC6A-203ENST00000587818 NUDCD1Q96RS6 583 aa20.16■□□□□ 0.82
TRAPPC6A-203ENST00000587818 RCOR3Q9P2K3 495 aaPredicted RBP20.16■□□□□ 0.82
TRAPPC6A-203ENST00000587818 PCDHGA1Q9Y5H4 931 aa20.16■□□□□ 0.82
TRAPPC6A-203ENST00000587818 KMT2BQ9UMN6 2715 aaPredicted RBP20.16■□□□□ 0.82
TRAPPC6A-203ENST00000587818 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.15■□□□□ 0.82
TRAPPC6A-203ENST00000587818 TRABD2BA6NFA1 517 aa20.15■□□□□ 0.82
TRAPPC6A-203ENST00000587818 K7ESM1 405 aa20.15■□□□□ 0.82
TRAPPC6A-203ENST00000587818 SCAMP1O15126 338 aa20.15■□□□□ 0.82
TRAPPC6A-203ENST00000587818 CAPNS1P04632 268 aa20.15■□□□□ 0.82
TRAPPC6A-203ENST00000587818 TNNT1P13805 278 aa20.15■□□□□ 0.82
TRAPPC6A-203ENST00000587818 JUPP14923 745 aa20.15■□□□□ 0.82
TRAPPC6A-203ENST00000587818 KDELR1P24390 212 aa20.15■□□□□ 0.82
TRAPPC6A-203ENST00000587818 POLR2LP62875 67 aaKnown RBP20.15■□□□□ 0.82
TRAPPC6A-203ENST00000587818 ITKQ08881 620 aa20.15■□□□□ 0.82
TRAPPC6A-203ENST00000587818 SLC10A2Q12908 348 aaPredicted RBP20.15■□□□□ 0.82
TRAPPC6A-203ENST00000587818 TRAF2Q12933 501 aa20.15■□□□□ 0.82
TRAPPC6A-203ENST00000587818 INPP5AQ14642 412 aa20.15■□□□□ 0.82
TRAPPC6A-203ENST00000587818 PAFAH1B3Q15102 231 aaKnown RBP20.15■□□□□ 0.82
TRAPPC6A-203ENST00000587818 PDK2Q15119 407 aa20.15■□□□□ 0.82
TRAPPC6A-203ENST00000587818 TCEA2Q15560 299 aa20.15■□□□□ 0.82
TRAPPC6A-203ENST00000587818 HS1BP3Q53T59 392 aa20.15■□□□□ 0.82
TRAPPC6A-203ENST00000587818 FAXCQ5TGI0 409 aa20.15■□□□□ 0.82
TRAPPC6A-203ENST00000587818 LIPIQ6XZB0 460 aa20.15■□□□□ 0.82
TRAPPC6A-203ENST00000587818 PLA2G15Q8NCC3 412 aa20.15■□□□□ 0.82
TRAPPC6A-203ENST00000587818 ZNF548Q8NEK5 533 aaPredicted RBP20.15■□□□□ 0.82
TRAPPC6A-203ENST00000587818 HYOU1Q9Y4L1 999 aa20.15■□□□□ 0.82
TRAPPC6A-203ENST00000587818 NEMP2A6NFY4 417 aa20.14■□□□□ 0.81
TRAPPC6A-203ENST00000587818 GCATO75600 419 aa20.14■□□□□ 0.81
TRAPPC6A-203ENST00000587818 PCCBP05166 539 aa20.14■□□□□ 0.81
TRAPPC6A-203ENST00000587818 KRT7P08729 469 aa20.14■□□□□ 0.81
TRAPPC6A-203ENST00000587818 C1SP09871 688 aa20.14■□□□□ 0.81
TRAPPC6A-203ENST00000587818 YPEL5P62699 121 aa20.14■□□□□ 0.81
TRAPPC6A-203ENST00000587818 GBE1Q04446 702 aa20.14■□□□□ 0.81
TRAPPC6A-203ENST00000587818 GALNT2Q10471 571 aa20.14■□□□□ 0.81
TRAPPC6A-203ENST00000587818 PTK2BQ14289 1009 aa20.14■□□□□ 0.81
TRAPPC6A-203ENST00000587818 DEFB133Q30KQ1 61 aa20.14■□□□□ 0.81
TRAPPC6A-203ENST00000587818 ENPP7Q6UWV6 458 aa20.14■□□□□ 0.81
TRAPPC6A-203ENST00000587818 DPPA4Q7L190 304 aa20.14■□□□□ 0.81
TRAPPC6A-203ENST00000587818 CNGA4Q8IV77 575 aa20.14■□□□□ 0.81
TRAPPC6A-203ENST00000587818 MAP7D3Q8IWC1 876 aa20.14■□□□□ 0.81
TRAPPC6A-203ENST00000587818 BBS5Q8N3I7 341 aa20.14■□□□□ 0.81
TRAPPC6A-203ENST00000587818 MDM1Q8TC05 714 aa20.14■□□□□ 0.81
TRAPPC6A-203ENST00000587818 TSACCQ96A04 125 aaPredicted RBP20.14■□□□□ 0.81
TRAPPC6A-203ENST00000587818 APOLD1Q96LR9 279 aa20.14■□□□□ 0.81
TRAPPC6A-203ENST00000587818 SMIM14Q96QK8 99 aa20.14■□□□□ 0.81
TRAPPC6A-203ENST00000587818 APOOQ9BUR5 198 aa20.14■□□□□ 0.81
TRAPPC6A-203ENST00000587818 RBSNQ9H1K0 784 aa20.14■□□□□ 0.81
TRAPPC6A-203ENST00000587818 B4GALT6Q9UBX8 382 aa20.14■□□□□ 0.81
TRAPPC6A-203ENST00000587818 OR1A2Q9Y585 309 aa20.14■□□□□ 0.81
TRAPPC6A-203ENST00000587818 A0A0U1RQS6 177 aa20.13■□□□□ 0.81
TRAPPC6A-203ENST00000587818 TMEM8BA6NDV4 472 aa20.13■□□□□ 0.81
TRAPPC6A-203ENST00000587818 H3BM21 787 aa20.13■□□□□ 0.81
TRAPPC6A-203ENST00000587818 AQP9O43315 295 aa20.13■□□□□ 0.81
TRAPPC6A-203ENST00000587818 HTRA2O43464 458 aaPredicted RBP20.13■□□□□ 0.81
TRAPPC6A-203ENST00000587818 RECQL5O94762 991 aaPredicted RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms