RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 C7P10643 843 aa18.7■□□□□ 0.58
DDX39A-206ENST00000587730 BMP2P12643 396 aa18.7■□□□□ 0.58
DDX39A-206ENST00000587730 ATP6V1B1P15313 513 aa18.7■□□□□ 0.58
DDX39A-206ENST00000587730 IMPDH1P20839 514 aa18.7■□□□□ 0.58
DDX39A-206ENST00000587730 CCR1P32246 355 aa18.7■□□□□ 0.58
DDX39A-206ENST00000587730 PSEN2P49810 448 aa18.7■□□□□ 0.58
DDX39A-206ENST00000587730 CDKL1Q00532 357 aa18.7■□□□□ 0.58
DDX39A-206ENST00000587730 MANEALQ5VSG8 457 aa18.7■□□□□ 0.58
DDX39A-206ENST00000587730 BTBD8Q5XKL5 378 aa18.7■□□□□ 0.58
DDX39A-206ENST00000587730 KRT80Q6KB66 452 aa18.7■□□□□ 0.58
DDX39A-206ENST00000587730 C8orf82Q6P1X6 216 aaPredicted RBP18.7■□□□□ 0.58
DDX39A-206ENST00000587730 IYDQ6PHW0 289 aa18.7■□□□□ 0.58
DDX39A-206ENST00000587730 DHFR2Q86XF0 187 aa18.7■□□□□ 0.58
DDX39A-206ENST00000587730 USP33Q8TEY7 942 aa18.7■□□□□ 0.58
DDX39A-206ENST00000587730 LPGAT1Q92604 370 aa18.7■□□□□ 0.58
DDX39A-206ENST00000587730 EDEM1Q92611 657 aa18.7■□□□□ 0.58
DDX39A-206ENST00000587730 ATP6V1E2Q96A05 226 aa18.7■□□□□ 0.58
DDX39A-206ENST00000587730 MARK4Q96L34 752 aa18.7■□□□□ 0.58
DDX39A-206ENST00000587730 CCT7Q99832 543 aa18.7■□□□□ 0.58
DDX39A-206ENST00000587730 SLC25A51Q9H1U9 297 aa18.7■□□□□ 0.58
DDX39A-206ENST00000587730 RBM22Q9NW64 420 aaKnown RBP eCLIP18.7■□□□□ 0.582e-6■□□□□ 10.6
DDX39A-206ENST00000587730 PTBP2Q9UKA9 531 aaKnown RBP18.7■□□□□ 0.58
DDX39A-206ENST00000587730 DSEQ9UL01 958 aa18.7■□□□□ 0.58
DDX39A-206ENST00000587730 NEU3Q9UQ49 428 aa18.7■□□□□ 0.58
DDX39A-206ENST00000587730 AQP12BA6NM10 295 aa18.69■□□□□ 0.58
DDX39A-206ENST00000587730 IRAK2O43187 625 aa18.69■□□□□ 0.58
DDX39A-206ENST00000587730 DYNC1LI2O43237 492 aaPredicted RBP18.69■□□□□ 0.58
DDX39A-206ENST00000587730 SLC7A4O43246 635 aa18.69■□□□□ 0.58
DDX39A-206ENST00000587730 MT-CYBP00156 380 aaPredicted RBP18.69■□□□□ 0.58
DDX39A-206ENST00000587730 ODC1P11926 461 aa18.69■□□□□ 0.58
DDX39A-206ENST00000587730 CPT1AP50416 773 aa18.69■□□□□ 0.58
DDX39A-206ENST00000587730 APLP1P51693 650 aa18.69■□□□□ 0.58
DDX39A-206ENST00000587730 BNIP2Q12982 314 aa18.69■□□□□ 0.58
DDX39A-206ENST00000587730 EIF4EBP2Q13542 120 aaPredicted RBP18.69■□□□□ 0.58
DDX39A-206ENST00000587730 CSHL1Q14406 222 aa18.69■□□□□ 0.58
DDX39A-206ENST00000587730 AFMIDQ63HM1 303 aa18.69■□□□□ 0.58
DDX39A-206ENST00000587730 GPR142Q7Z601 462 aa18.69■□□□□ 0.58
DDX39A-206ENST00000587730 AQP12AQ8IXF9 295 aa18.69■□□□□ 0.58
DDX39A-206ENST00000587730 TRIML2Q8N7C3 387 aa18.69■□□□□ 0.58
DDX39A-206ENST00000587730 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.69■□□□□ 0.58
DDX39A-206ENST00000587730 UBXN10Q96LJ8 280 aa18.69■□□□□ 0.58
DDX39A-206ENST00000587730 CYP2S1Q96SQ9 504 aa18.69■□□□□ 0.58
DDX39A-206ENST00000587730 ACBD6Q9BR61 282 aa18.69■□□□□ 0.58
DDX39A-206ENST00000587730 ANKRD60Q9BZ19 345 aa18.69■□□□□ 0.58
DDX39A-206ENST00000587730 MUC13Q9H3R2 512 aa18.69■□□□□ 0.58
DDX39A-206ENST00000587730 CHST12Q9NRB3 414 aa18.69■□□□□ 0.58
DDX39A-206ENST00000587730 ABCC13Q9NSE7 274 aa18.69■□□□□ 0.58
DDX39A-206ENST00000587730 SLC8A2Q9UPR5 921 aa18.69■□□□□ 0.58
DDX39A-206ENST00000587730 TRAF6Q9Y4K3 522 aa18.69■□□□□ 0.58
DDX39A-206ENST00000587730 GMEB1Q9Y692 573 aa18.69■□□□□ 0.58
DDX39A-206ENST00000587730 WASH4PA8MWX3 477 aa18.68■□□□□ 0.58
DDX39A-206ENST00000587730 TMEM233B4DJY2 109 aa18.68■□□□□ 0.58
DDX39A-206ENST00000587730 PDHXO00330 501 aa18.68■□□□□ 0.58
DDX39A-206ENST00000587730 CD1EP15812 388 aa18.68■□□□□ 0.58
DDX39A-206ENST00000587730 NAA20P61599 178 aa18.68■□□□□ 0.58
DDX39A-206ENST00000587730 ZNF460Q14592 562 aa18.68■□□□□ 0.58
DDX39A-206ENST00000587730 COQ5Q5HYK3 327 aa18.68■□□□□ 0.58
DDX39A-206ENST00000587730 TAF2Q6P1X5 1199 aa18.68■□□□□ 0.58
DDX39A-206ENST00000587730 MOB2Q70IA6 237 aa18.68■□□□□ 0.58
DDX39A-206ENST00000587730 PLEKHH3Q7Z736 793 aa18.68■□□□□ 0.58
DDX39A-206ENST00000587730 ERI1Q8IV48 349 aaKnown RBP18.68■□□□□ 0.58
DDX39A-206ENST00000587730 TNIP2Q8NFZ5 429 aa18.68■□□□□ 0.58
DDX39A-206ENST00000587730 OR2T34Q8NGX1 318 aa18.68■□□□□ 0.58
DDX39A-206ENST00000587730 OR2T3Q8NH03 318 aa18.68■□□□□ 0.58
DDX39A-206ENST00000587730 SLC10A4Q96EP9 437 aa18.68■□□□□ 0.58
DDX39A-206ENST00000587730 COQ10BQ9H8M1 238 aa18.68■□□□□ 0.58
DDX39A-206ENST00000587730 RSL24D1Q9UHA3 163 aaKnown RBP18.68■□□□□ 0.58
DDX39A-206ENST00000587730 NDUFAF1Q9Y375 327 aa18.68■□□□□ 0.58
DDX39A-206ENST00000587730 FBP2O00757 339 aa18.67■□□□□ 0.58
DDX39A-206ENST00000587730 HNRNPRO43390 633 aaKnown RBP18.67■□□□□ 0.58
DDX39A-206ENST00000587730 HNRNPLP14866 589 aaKnown RBP eCLIP18.67■□□□□ 0.58
DDX39A-206ENST00000587730 TCN1P20061 433 aaPredicted RBP18.67■□□□□ 0.58
DDX39A-206ENST00000587730 MSX2P35548 267 aaPredicted RBP18.67■□□□□ 0.58
DDX39A-206ENST00000587730 ALDH3B2P48448 385 aa18.67■□□□□ 0.58
DDX39A-206ENST00000587730 SERPINH1P50454 418 aaKnown RBP18.67■□□□□ 0.58
DDX39A-206ENST00000587730 CDK9P50750 372 aaKnown RBP18.67■□□□□ 0.58
DDX39A-206ENST00000587730 RENBPP51606 427 aa18.67■□□□□ 0.58
DDX39A-206ENST00000587730 FOXM1Q08050 763 aa18.67■□□□□ 0.58
DDX39A-206ENST00000587730 SEPT6Q14141 434 aa18.67■□□□□ 0.58
DDX39A-206ENST00000587730 INPP5AQ14642 412 aa18.67■□□□□ 0.58
DDX39A-206ENST00000587730 KCTD21Q4G0X4 260 aa18.67■□□□□ 0.58
DDX39A-206ENST00000587730 PPP4R4Q6NUP7 873 aa18.67■□□□□ 0.58
DDX39A-206ENST00000587730 HERC6Q8IVU3 1022 aa18.67■□□□□ 0.58
DDX39A-206ENST00000587730 PCDH20Q8N6Y1 951 aaKnown RBP18.67■□□□□ 0.58
DDX39A-206ENST00000587730 RTL3Q8N8U3 475 aaKnown RBP18.67■□□□□ 0.58
DDX39A-206ENST00000587730 PEX13Q92968 403 aa18.67■□□□□ 0.58
DDX39A-206ENST00000587730 MYLPFQ96A32 169 aa18.67■□□□□ 0.58
DDX39A-206ENST00000587730 MOCOSQ96EN8 888 aa18.67■□□□□ 0.58
DDX39A-206ENST00000587730 RMND5BQ96G75 393 aaPredicted RBP18.67■□□□□ 0.58
DDX39A-206ENST00000587730 MRGPRX2Q96LB1 330 aa18.67■□□□□ 0.58
DDX39A-206ENST00000587730 BIRC8Q96P09 236 aa18.67■□□□□ 0.58
DDX39A-206ENST00000587730 SMOC2Q9H3U7 446 aa18.67■□□□□ 0.58
DDX39A-206ENST00000587730 SNX10Q9Y5X0 201 aa18.67■□□□□ 0.58
DDX39A-206ENST00000587730 CCDC78A2IDD5 438 aa18.67■□□□□ 0.58
DDX39A-206ENST00000587730 C17orf102A2RUQ5 167 aa18.67■□□□□ 0.58
DDX39A-206ENST00000587730 H3BNH8 94 aa18.67■□□□□ 0.58
DDX39A-206ENST00000587730 M0QZ92 97 aa18.67■□□□□ 0.58
DDX39A-206ENST00000587730 ZNF701M0R085 212 aaPredicted RBP18.67■□□□□ 0.58
DDX39A-206ENST00000587730 TRMUO75648 421 aaKnown RBP18.67■□□□□ 0.58
DDX39A-206ENST00000587730 BMP10O95393 424 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms