RNA–Protein interactions for RNA: ENST00000587718.5

CAPNS1-204, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-204ENST00000587718 RWDD4Q6NW29 188 aaKnown RBP25.69■■□□□ 1.7
CAPNS1-204ENST00000587718 MTDHQ86UE4 582 aaKnown RBP25.69■■□□□ 1.7
CAPNS1-204ENST00000587718 CEP295NLQ96MC4 621 aa25.69■■□□□ 1.7
CAPNS1-204ENST00000587718 MCMBPQ9BTE3 642 aa25.69■■□□□ 1.7
CAPNS1-204ENST00000587718 DCTN4Q9UJW0 460 aa25.69■■□□□ 1.7
CAPNS1-204ENST00000587718 PTPRZ1P23471 2315 aaPredicted RBP25.69■■□□□ 1.7
CAPNS1-204ENST00000587718 A0A0G2JND7 137 aa25.68■■□□□ 1.7
CAPNS1-204ENST00000587718 LAMTOR5O43504 91 aa25.68■■□□□ 1.7
CAPNS1-204ENST00000587718 MAFKO60675 156 aa25.68■■□□□ 1.7
CAPNS1-204ENST00000587718 CCDC22O60826 627 aa25.68■■□□□ 1.7
CAPNS1-204ENST00000587718 RTN3O95197 1032 aaPredicted RBP25.68■■□□□ 1.7
CAPNS1-204ENST00000587718 APOA4P06727 396 aa25.68■■□□□ 1.7
CAPNS1-204ENST00000587718 TYK2P29597 1187 aa25.68■■□□□ 1.7
CAPNS1-204ENST00000587718 CDC25CP30307 473 aa25.68■■□□□ 1.7
CAPNS1-204ENST00000587718 CYP4F8P98187 520 aa25.68■■□□□ 1.7
CAPNS1-204ENST00000587718 TNK2Q07912 1038 aa25.68■■□□□ 1.7
CAPNS1-204ENST00000587718 OVGP1Q12889 678 aa25.68■■□□□ 1.7
CAPNS1-204ENST00000587718 UGP2Q16851 508 aa25.68■■□□□ 1.7
CAPNS1-204ENST00000587718 CNTD1Q8N815 330 aa25.68■■□□□ 1.7
CAPNS1-204ENST00000587718 SLC7A6OSQ96CW6 309 aaPredicted RBP25.68■■□□□ 1.7
CAPNS1-204ENST00000587718 THOC1Q96FV9 657 aaKnown RBP25.68■■□□□ 1.7
CAPNS1-204ENST00000587718 SLC46A2Q9BY10 475 aa25.68■■□□□ 1.7
CAPNS1-204ENST00000587718 RETREG1Q9H6L5 497 aa25.68■■□□□ 1.7
CAPNS1-204ENST00000587718 ANKRD6Q9Y2G4 727 aa25.68■■□□□ 1.7
CAPNS1-204ENST00000587718 SNX10Q9Y5X0 201 aa25.68■■□□□ 1.7
CAPNS1-204ENST00000587718 MYO18AQ92614 2054 aaKnown RBP25.67■■□□□ 1.7
CAPNS1-204ENST00000587718 H2AFYO75367 372 aaKnown RBP25.67■■□□□ 1.7
CAPNS1-204ENST00000587718 LMNAP02545 664 aaKnown RBP25.67■■□□□ 1.7
CAPNS1-204ENST00000587718 F11P03951 625 aa25.67■■□□□ 1.7
CAPNS1-204ENST00000587718 PROCP04070 461 aa25.67■■□□□ 1.7
CAPNS1-204ENST00000587718 SERPINE1P05121 402 aa25.67■■□□□ 1.7
CAPNS1-204ENST00000587718 CCND1P24385 295 aa25.67■■□□□ 1.7
CAPNS1-204ENST00000587718 PRKAA2P54646 552 aa25.67■■□□□ 1.7
CAPNS1-204ENST00000587718 ARHGAP15Q53QZ3 475 aa25.67■■□□□ 1.7
CAPNS1-204ENST00000587718 FAM182AQ5T1J6 154 aa25.67■■□□□ 1.7
CAPNS1-204ENST00000587718 N4BP2L1Q5TBK1 243 aaPredicted RBP25.67■■□□□ 1.7
CAPNS1-204ENST00000587718 ZC3H14Q6PJT7 736 aaKnown RBP25.67■■□□□ 1.7
CAPNS1-204ENST00000587718 MAMSTRQ6ZN01 415 aa25.67■■□□□ 1.7
CAPNS1-204ENST00000587718 UNC5BQ8IZJ1 945 aa25.67■■□□□ 1.7
CAPNS1-204ENST00000587718 UMODL1-AS1Q8N2C9 162 aa25.67■■□□□ 1.7
CAPNS1-204ENST00000587718 FAM3CQ92520 227 aa25.67■■□□□ 1.7
CAPNS1-204ENST00000587718 NELL1Q92832 810 aa25.67■■□□□ 1.7
CAPNS1-204ENST00000587718 NSL1Q96IY1 281 aa25.67■■□□□ 1.7
CAPNS1-204ENST00000587718 EMCNQ9ULC0 261 aa25.67■■□□□ 1.7
CAPNS1-204ENST00000587718 NDRG2Q9UN36 371 aaKnown RBP25.67■■□□□ 1.7
CAPNS1-204ENST00000587718 F5P12259 2224 aa25.66■■□□□ 1.7
CAPNS1-204ENST00000587718 A0A1W2PQH9 124 aa25.66■■□□□ 1.7
CAPNS1-204ENST00000587718 PRAMEF12O95522 483 aa25.66■■□□□ 1.7
CAPNS1-204ENST00000587718 GSRP00390 522 aa25.66■■□□□ 1.7
CAPNS1-204ENST00000587718 ERVK-10P10266 1014 aa25.66■■□□□ 1.7
CAPNS1-204ENST00000587718 RHOQP17081 205 aa25.66■■□□□ 1.7
CAPNS1-204ENST00000587718 CALB2P22676 271 aa25.66■■□□□ 1.7
CAPNS1-204ENST00000587718 GPR15P49685 360 aa25.66■■□□□ 1.7
CAPNS1-204ENST00000587718 ZBTB16Q05516 673 aa25.66■■□□□ 1.7
CAPNS1-204ENST00000587718 FASTKD1Q53R41 847 aaKnown RBP25.66■■□□□ 1.7
CAPNS1-204ENST00000587718 MBLAC2Q68D91 279 aa25.66■■□□□ 1.7
CAPNS1-204ENST00000587718 KCNMB4Q86W47 210 aa25.66■■□□□ 1.7
CAPNS1-204ENST00000587718 CNTN4Q8IWV2 1026 aa25.66■■□□□ 1.7
CAPNS1-204ENST00000587718 NETO2Q8NC67 525 aa25.66■■□□□ 1.7
CAPNS1-204ENST00000587718 SREK1Q8WXA9 508 aaKnown RBP25.66■■□□□ 1.7
CAPNS1-204ENST00000587718 TBL1YQ9BQ87 522 aa25.66■■□□□ 1.7
CAPNS1-204ENST00000587718 PSAT1Q9Y617 370 aa25.66■■□□□ 1.7
CAPNS1-204ENST00000587718 FAM186AA6NE01 2351 aa25.66■■□□□ 1.7
CAPNS1-204ENST00000587718 E9PAM4 449 aa25.65■■□□□ 1.7
CAPNS1-204ENST00000587718 F5H423 210 aaPredicted RBP25.65■■□□□ 1.7
CAPNS1-204ENST00000587718 SIN3BO75182 1162 aa25.65■■□□□ 1.7
CAPNS1-204ENST00000587718 MYL2P10916 166 aa25.65■■□□□ 1.7
CAPNS1-204ENST00000587718 TUBP50607 506 aa25.65■■□□□ 1.7
CAPNS1-204ENST00000587718 MTAPQ13126 283 aa25.65■■□□□ 1.7
CAPNS1-204ENST00000587718 MPP3Q13368 585 aa25.65■■□□□ 1.7
CAPNS1-204ENST00000587718 PKN3Q6P5Z2 889 aa25.65■■□□□ 1.7
CAPNS1-204ENST00000587718 STRA8Q7Z7C7 330 aa25.65■■□□□ 1.7
CAPNS1-204ENST00000587718 SCN4BQ8IWT1 228 aa25.65■■□□□ 1.7
CAPNS1-204ENST00000587718 YAF2Q8IY57 180 aa25.65■■□□□ 1.7
CAPNS1-204ENST00000587718 ATP6V0D2Q8N8Y2 350 aa25.65■■□□□ 1.7
CAPNS1-204ENST00000587718 SPATA17Q96L03 361 aa25.65■■□□□ 1.7
CAPNS1-204ENST00000587718 SLC39A8Q9C0K1 460 aa25.65■■□□□ 1.7
CAPNS1-204ENST00000587718 SIK2Q9H0K1 926 aa25.65■■□□□ 1.7
CAPNS1-204ENST00000587718 CHRDQ9H2X0 955 aa25.65■■□□□ 1.7
CAPNS1-204ENST00000587718 NMUR1Q9HB89 426 aa25.65■■□□□ 1.7
CAPNS1-204ENST00000587718 SNX15Q9NRS6 342 aa25.65■■□□□ 1.7
CAPNS1-204ENST00000587718 HAO1Q9UJM8 370 aa25.65■■□□□ 1.7
CAPNS1-204ENST00000587718 HBS1LQ9Y450 684 aaKnown RBP25.65■■□□□ 1.7
CAPNS1-204ENST00000587718 CSRP3P50461 194 aa25.65■■□□□ 1.7
CAPNS1-204ENST00000587718 TAF12Q16514 161 aa25.65■■□□□ 1.7
CAPNS1-204ENST00000587718 WASHC2DQ5SRD0 308 aa25.65■■□□□ 1.7
CAPNS1-204ENST00000587718 CLEC14AQ86T13 490 aa25.65■■□□□ 1.7
CAPNS1-204ENST00000587718 WDR75Q8IWA0 830 aaKnown RBP25.65■■□□□ 1.7
CAPNS1-204ENST00000587718 DCLK2Q8N568 766 aa25.65■■□□□ 1.7
CAPNS1-204ENST00000587718 PPP1R14CQ8TAE6 165 aa25.65■■□□□ 1.7
CAPNS1-204ENST00000587718 RDH11Q8TC12 318 aa25.65■■□□□ 1.7
CAPNS1-204ENST00000587718 PTCD3Q96EY7 689 aaKnown RBP25.65■■□□□ 1.7
CAPNS1-204ENST00000587718 CELF6Q96J87 481 aaKnown RBP25.65■■□□□ 1.7
CAPNS1-204ENST00000587718 TACO1Q9BSH4 297 aaKnown RBP25.65■■□□□ 1.7
CAPNS1-204ENST00000587718 PRMT8Q9NR22 394 aaPredicted RBP25.65■■□□□ 1.7
CAPNS1-204ENST00000587718 OSER1Q9NX31 292 aa25.65■■□□□ 1.7
CAPNS1-204ENST00000587718 BAIAP2L1Q9UHR4 511 aa25.65■■□□□ 1.7
CAPNS1-204ENST00000587718 ZMYM5Q9UJ78 669 aa25.65■■□□□ 1.7
CAPNS1-204ENST00000587718 HS3ST4Q9Y661 456 aa25.65■■□□□ 1.7
CAPNS1-204ENST00000587718 FANCMQ8IYD8 2048 aa25.64■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms