RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 TAC1P20366 129 aa19.96■□□□□ 0.79
TRIM47-204ENST00000587339 GABRB3P28472 473 aa19.96■□□□□ 0.79
TRIM47-204ENST00000587339 WEE1P30291 646 aa19.96■□□□□ 0.79
TRIM47-204ENST00000587339 HADHAP40939 763 aa19.96■□□□□ 0.79
TRIM47-204ENST00000587339 CTSOP43234 321 aaPredicted RBP19.96■□□□□ 0.79
TRIM47-204ENST00000587339 MPP1Q00013 466 aa19.96■□□□□ 0.79
TRIM47-204ENST00000587339 ACVR1Q04771 509 aa19.96■□□□□ 0.79
TRIM47-204ENST00000587339 RARS2Q5T160 578 aaKnown RBP19.96■□□□□ 0.79
TRIM47-204ENST00000587339 GKAP1Q5VSY0 366 aaPredicted RBP19.96■□□□□ 0.79
TRIM47-204ENST00000587339 ASTLQ6HA08 431 aaPredicted RBP19.96■□□□□ 0.79
TRIM47-204ENST00000587339 FOXR1Q6PIV2 292 aa19.96■□□□□ 0.79
TRIM47-204ENST00000587339 KIAA0408Q6ZU52 694 aa19.96■□□□□ 0.79
TRIM47-204ENST00000587339 CMC1Q7Z7K0 106 aa19.96■□□□□ 0.79
TRIM47-204ENST00000587339 NPAS3Q8IXF0 933 aa19.96■□□□□ 0.79
TRIM47-204ENST00000587339 OR6K2Q8NGY2 324 aa19.96■□□□□ 0.79
TRIM47-204ENST00000587339 MARK1Q9P0L2 795 aa19.96■□□□□ 0.79
TRIM47-204ENST00000587339 FBXO5Q9UKT4 447 aa19.96■□□□□ 0.79
TRIM47-204ENST00000587339 WDR91A4D1P6 747 aa19.95■□□□□ 0.78
TRIM47-204ENST00000587339 MAPK8P45983 427 aa19.95■□□□□ 0.78
TRIM47-204ENST00000587339 ARSDP51689 593 aa19.95■□□□□ 0.78
TRIM47-204ENST00000587339 GRM3Q14832 879 aa19.95■□□□□ 0.78
TRIM47-204ENST00000587339 RGS9BPQ6ZS82 235 aa19.95■□□□□ 0.78
TRIM47-204ENST00000587339 GLT6D1Q7Z4J2 308 aa19.95■□□□□ 0.78
TRIM47-204ENST00000587339 PTAR1Q7Z6K3 402 aaPredicted RBP19.95■□□□□ 0.78
TRIM47-204ENST00000587339 STYXQ8WUJ0 223 aa19.95■□□□□ 0.78
TRIM47-204ENST00000587339 TBATAQ96M53 351 aa19.95■□□□□ 0.78
TRIM47-204ENST00000587339 LRRC3BQ96PB8 259 aa19.95■□□□□ 0.78
TRIM47-204ENST00000587339 GPR22Q99680 433 aa19.95■□□□□ 0.78
TRIM47-204ENST00000587339 MFSD1Q9H3U5 465 aa19.95■□□□□ 0.78
TRIM47-204ENST00000587339 CAB39LQ9H9S4 337 aa19.95■□□□□ 0.78
TRIM47-204ENST00000587339 FGFR1OP2Q9NVK5 253 aa19.95■□□□□ 0.78
TRIM47-204ENST00000587339 DUS2Q9NX74 493 aaKnown RBP19.95■□□□□ 0.78
TRIM47-204ENST00000587339 DCDC2Q9UHG0 476 aa19.95■□□□□ 0.78
TRIM47-204ENST00000587339 RIMKLBQ9ULI2 386 aa19.95■□□□□ 0.78
TRIM47-204ENST00000587339 HS3ST2Q9Y278 367 aa19.95■□□□□ 0.78
TRIM47-204ENST00000587339 PCDHB9Q9Y5E1 797 aa19.95■□□□□ 0.78
TRIM47-204ENST00000587339 SPO11Q9Y5K1 396 aa19.95■□□□□ 0.78
TRIM47-204ENST00000587339 CCL22O00626 93 aa19.94■□□□□ 0.78
TRIM47-204ENST00000587339 GLRA3O75311 464 aa19.94■□□□□ 0.78
TRIM47-204ENST00000587339 IGSF6O95976 241 aa19.94■□□□□ 0.78
TRIM47-204ENST00000587339 SRCP12931 536 aa19.94■□□□□ 0.78
TRIM47-204ENST00000587339 FSHRP23945 695 aa19.94■□□□□ 0.78
TRIM47-204ENST00000587339 SLC8A1P32418 973 aa19.94■□□□□ 0.78
TRIM47-204ENST00000587339 VIPR2P41587 438 aa19.94■□□□□ 0.78
TRIM47-204ENST00000587339 MAGEA12P43365 314 aa19.94■□□□□ 0.78
TRIM47-204ENST00000587339 CSNK1DP48730 415 aa19.94■□□□□ 0.78
TRIM47-204ENST00000587339 STK19P49842 368 aaPredicted RBP19.94■□□□□ 0.78
TRIM47-204ENST00000587339 TMPRSS15P98073 1019 aa19.94■□□□□ 0.78
TRIM47-204ENST00000587339 ZKSCAN8Q15776 578 aaPredicted RBP19.94■□□□□ 0.78
TRIM47-204ENST00000587339 PPM1JQ5JR12 505 aa19.94■□□□□ 0.78
TRIM47-204ENST00000587339 OTUD6BQ8N6M0 293 aa19.94■□□□□ 0.78
TRIM47-204ENST00000587339 OR13C4Q8NGS5 318 aa19.94■□□□□ 0.78
TRIM47-204ENST00000587339 DNAJC1Q96KC8 554 aaKnown RBP19.94■□□□□ 0.78
TRIM47-204ENST00000587339 APOL5Q9BWW9 433 aa19.94■□□□□ 0.78
TRIM47-204ENST00000587339 TNKS2Q9H2K2 1166 aa19.94■□□□□ 0.78
TRIM47-204ENST00000587339 EVLQ9UI08 416 aaPredicted RBP19.94■□□□□ 0.78
TRIM47-204ENST00000587339 SLC25A13Q9UJS0 675 aa19.94■□□□□ 0.78
TRIM47-204ENST00000587339 SLC39A10Q9ULF5 831 aa19.94■□□□□ 0.78
TRIM47-204ENST00000587339 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.94■□□□□ 0.78
TRIM47-204ENST00000587339 C2orf81A6NN90 581 aa19.94■□□□□ 0.78
TRIM47-204ENST00000587339 FZD6O60353 706 aa19.94■□□□□ 0.78
TRIM47-204ENST00000587339 TOP3BO95985 862 aaKnown RBP19.94■□□□□ 0.78
TRIM47-204ENST00000587339 EPHB1P54762 984 aa19.94■□□□□ 0.78
TRIM47-204ENST00000587339 BCL2L1Q07817 233 aa19.94■□□□□ 0.78
TRIM47-204ENST00000587339 PTPRCAPQ14761 206 aa19.94■□□□□ 0.78
TRIM47-204ENST00000587339 TAF1AQ15573 450 aaPredicted RBP19.94■□□□□ 0.78
TRIM47-204ENST00000587339 FAM78AQ5JUQ0 283 aa19.94■□□□□ 0.78
TRIM47-204ENST00000587339 DGKKQ5KSL6 1271 aa19.94■□□□□ 0.78
TRIM47-204ENST00000587339 LMNTD2Q8IXW0 634 aa19.94■□□□□ 0.78
TRIM47-204ENST00000587339 KIAA1958Q8N8K9 716 aa19.94■□□□□ 0.78
TRIM47-204ENST00000587339 NAT16Q8N8M0 369 aa19.94■□□□□ 0.78
TRIM47-204ENST00000587339 ARMC2Q8NEN0 867 aa19.94■□□□□ 0.78
TRIM47-204ENST00000587339 OR2AP1Q8NGE2 309 aa19.94■□□□□ 0.78
TRIM47-204ENST00000587339 OSCP1Q8WVF1 389 aa19.94■□□□□ 0.78
TRIM47-204ENST00000587339 FGF13Q92913 245 aa19.94■□□□□ 0.78
TRIM47-204ENST00000587339 CABS1Q96KC9 395 aa19.94■□□□□ 0.78
TRIM47-204ENST00000587339 SLC2A11Q9BYW1 496 aa19.94■□□□□ 0.78
TRIM47-204ENST00000587339 EBAG9O00559 213 aa19.93■□□□□ 0.78
TRIM47-204ENST00000587339 AURKAO14965 403 aa19.93■□□□□ 0.78
TRIM47-204ENST00000587339 ZNF821O75541 412 aaPredicted RBP19.93■□□□□ 0.78
TRIM47-204ENST00000587339 RPP40O75818 363 aaKnown RBP19.93■□□□□ 0.78
TRIM47-204ENST00000587339 MPOP05164 745 aa19.93■□□□□ 0.78
TRIM47-204ENST00000587339 CD151P48509 253 aa19.93■□□□□ 0.78
TRIM47-204ENST00000587339 SERPINB4P48594 390 aa19.93■□□□□ 0.78
TRIM47-204ENST00000587339 SULT2A1Q06520 285 aa19.93■□□□□ 0.78
TRIM47-204ENST00000587339 DMC1Q14565 340 aa19.93■□□□□ 0.78
TRIM47-204ENST00000587339 DHCR24Q15392 516 aa19.93■□□□□ 0.78
TRIM47-204ENST00000587339 ARMC12Q5T9G4 340 aa19.93■□□□□ 0.78
TRIM47-204ENST00000587339 COL13A1Q5TAT6 717 aaPredicted RBP19.93■□□□□ 0.78
TRIM47-204ENST00000587339 KYAT3Q6YP21 454 aaKnown RBP19.93■□□□□ 0.78
TRIM47-204ENST00000587339 CAMK1DQ8IU85 385 aa19.93■□□□□ 0.78
TRIM47-204ENST00000587339 CILP2Q8IUL8 1156 aa19.93■□□□□ 0.78
TRIM47-204ENST00000587339 RYBPQ8N488 228 aaPredicted RBP19.93■□□□□ 0.78
TRIM47-204ENST00000587339 ACVR1CQ8NER5 493 aa19.93■□□□□ 0.78
TRIM47-204ENST00000587339 MDGA1Q8NFP4 955 aa19.93■□□□□ 0.78
TRIM47-204ENST00000587339 ZNF75CPQ92670 426 aaPredicted RBP19.93■□□□□ 0.78
TRIM47-204ENST00000587339 RSPRY1Q96DX4 576 aa19.93■□□□□ 0.78
TRIM47-204ENST00000587339 ASB16Q96NS5 453 aa19.93■□□□□ 0.78
TRIM47-204ENST00000587339 A0A096LPK6 155 aa19.92■□□□□ 0.78
TRIM47-204ENST00000587339 HAUS5O94927 633 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms