RNA–Protein interactions for RNA: ENST00000586538.1

ACTN4-209, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-209ENST00000586538 ANKRD11Q6UB99 2663 aaPredicted RBP11.33□□□□□ -0.59
ACTN4-209ENST00000586538 PKD1L2Q7Z442 2459 aa11.33□□□□□ -0.6
ACTN4-209ENST00000586538 SYCE3A1L190 88 aa11.33□□□□□ -0.6
ACTN4-209ENST00000586538 EME2A4GXA9 379 aaPredicted RBP11.33□□□□□ -0.6
ACTN4-209ENST00000586538 LMO7DNF2Z398 122 aa11.33□□□□□ -0.6
ACTN4-209ENST00000586538 J3KR12 359 aa11.33□□□□□ -0.6
ACTN4-209ENST00000586538 MYO1FO00160 1098 aa11.33□□□□□ -0.6
ACTN4-209ENST00000586538 CACNB4O00305 520 aaPredicted RBP11.33□□□□□ -0.6
ACTN4-209ENST00000586538 SPINT1O43278 529 aa11.33□□□□□ -0.6
ACTN4-209ENST00000586538 OPA1O60313 960 aa11.33□□□□□ -0.6
ACTN4-209ENST00000586538 SOCS5O75159 536 aa11.33□□□□□ -0.6
ACTN4-209ENST00000586538 TPM1P09493 284 aa11.33□□□□□ -0.6
ACTN4-209ENST00000586538 CYP2A6P11509 494 aaPredicted RBP11.33□□□□□ -0.6
ACTN4-209ENST00000586538 MMP12P39900 470 aa11.33□□□□□ -0.6
ACTN4-209ENST00000586538 SCNN1BP51168 640 aa11.33□□□□□ -0.6
ACTN4-209ENST00000586538 CDH6P55285 790 aa11.33□□□□□ -0.6
ACTN4-209ENST00000586538 FANCCQ00597 558 aa11.33□□□□□ -0.6
ACTN4-209ENST00000586538 SEMG2Q02383 582 aa11.33□□□□□ -0.6
ACTN4-209ENST00000586538 TRIM14Q14142 442 aa11.33□□□□□ -0.6
ACTN4-209ENST00000586538 KRT81Q14533 505 aa11.33□□□□□ -0.6
ACTN4-209ENST00000586538 NFATC4Q14934 902 aa11.33□□□□□ -0.6
ACTN4-209ENST00000586538 IRF4Q15306 451 aa11.33□□□□□ -0.6
ACTN4-209ENST00000586538 TSR1Q2NL82 804 aaKnown RBP11.33□□□□□ -0.6
ACTN4-209ENST00000586538 ZNF542PQ5EBM4 170 aa11.33□□□□□ -0.6
ACTN4-209ENST00000586538 KDM7AQ6ZMT4 941 aa11.33□□□□□ -0.6
ACTN4-209ENST00000586538 MAP7D3Q8IWC1 876 aa11.33□□□□□ -0.6
ACTN4-209ENST00000586538 SNIP1Q8TAD8 396 aaKnown RBP11.33□□□□□ -0.6
ACTN4-209ENST00000586538 SPOCK2Q92563 424 aa11.33□□□□□ -0.6
ACTN4-209ENST00000586538 FGF11Q92914 225 aa11.33□□□□□ -0.6
ACTN4-209ENST00000586538 WDR92Q96MX6 357 aa11.33□□□□□ -0.6
ACTN4-209ENST00000586538 ZNF578Q96N58 590 aaPredicted RBP11.33□□□□□ -0.6
ACTN4-209ENST00000586538 NAP1L5Q96NT1 182 aaPredicted RBP11.33□□□□□ -0.6
ACTN4-209ENST00000586538 DCBLD2Q96PD2 775 aa11.33□□□□□ -0.6
ACTN4-209ENST00000586538 FUCA2Q9BTY2 467 aa11.33□□□□□ -0.6
ACTN4-209ENST00000586538 KLC2Q9H0B6 622 aa11.33□□□□□ -0.6
ACTN4-209ENST00000586538 PCDH12Q9NPG4 1184 aa11.33□□□□□ -0.6
ACTN4-209ENST00000586538 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.33□□□□□ -0.6
ACTN4-209ENST00000586538 KLQ9UEF7 1012 aa11.33□□□□□ -0.6
ACTN4-209ENST00000586538 ANAPC7Q9UJX3 599 aa11.33□□□□□ -0.6
ACTN4-209ENST00000586538 KNTC1P50748 2209 aa11.33□□□□□ -0.6
ACTN4-209ENST00000586538 ARID1BQ8NFD5 2236 aaPredicted RBP11.32□□□□□ -0.6
ACTN4-209ENST00000586538 EIF4E1BA6NMX2 242 aaKnown RBP11.32□□□□□ -0.6
ACTN4-209ENST00000586538 TMX2-CTNND1H3BSU7 103 aa11.32□□□□□ -0.6
ACTN4-209ENST00000586538 ZW10O43264 779 aa11.32□□□□□ -0.6
ACTN4-209ENST00000586538 CBFA2T2O43439 604 aa11.32□□□□□ -0.6
ACTN4-209ENST00000586538 NEBLO76041 1014 aa11.32□□□□□ -0.6
ACTN4-209ENST00000586538 TNFP01375 233 aa11.32□□□□□ -0.6
ACTN4-209ENST00000586538 GIMD1P0DJR0 217 aa11.32□□□□□ -0.6
ACTN4-209ENST00000586538 SKILP12757 684 aa11.32□□□□□ -0.6
ACTN4-209ENST00000586538 CA4P22748 312 aa11.32□□□□□ -0.6
ACTN4-209ENST00000586538 CES1P23141 567 aa11.32□□□□□ -0.6
ACTN4-209ENST00000586538 LIG3P49916 1009 aa11.32□□□□□ -0.6
ACTN4-209ENST00000586538 HK3P52790 923 aa11.32□□□□□ -0.6
ACTN4-209ENST00000586538 PCBP4P57723 403 aaKnown RBP11.32□□□□□ -0.6
ACTN4-209ENST00000586538 EIF2B5Q13144 721 aaKnown RBP11.32□□□□□ -0.6
ACTN4-209ENST00000586538 DPYSQ14117 519 aa11.32□□□□□ -0.6
ACTN4-209ENST00000586538 NFKBIBQ15653 356 aa11.32□□□□□ -0.6
ACTN4-209ENST00000586538 CA9Q16790 459 aa11.32□□□□□ -0.6
ACTN4-209ENST00000586538 COL28A1Q2UY09 1125 aa11.32□□□□□ -0.6
ACTN4-209ENST00000586538 SKOR2Q2VWA4 1001 aaPredicted RBP11.32□□□□□ -0.6
ACTN4-209ENST00000586538 DEFB133Q30KQ1 61 aa11.32□□□□□ -0.6
ACTN4-209ENST00000586538 LRRC73Q5JTD7 316 aa11.32□□□□□ -0.6
ACTN4-209ENST00000586538 CDCP2Q5VXM1 449 aa11.32□□□□□ -0.6
ACTN4-209ENST00000586538 TIGD7Q6NT04 549 aaPredicted RBP11.32□□□□□ -0.6
ACTN4-209ENST00000586538 RBM44Q6ZP01 1051 aaKnown RBP11.32□□□□□ -0.6
ACTN4-209ENST00000586538 PDZD3Q86UT5 571 aa11.32□□□□□ -0.6
ACTN4-209ENST00000586538 CAMK1DQ8IU85 385 aa11.32□□□□□ -0.6
ACTN4-209ENST00000586538 ARHGAP12Q8IWW6 846 aa11.32□□□□□ -0.6
ACTN4-209ENST00000586538 ARL10Q8N8L6 244 aa11.32□□□□□ -0.6
ACTN4-209ENST00000586538 TSEN2Q8NCE0 465 aaKnown RBP11.32□□□□□ -0.6
ACTN4-209ENST00000586538 HNRNPLLQ8WVV9 542 aaKnown RBP11.32□□□□□ -0.6
ACTN4-209ENST00000586538 HSPH1Q92598 858 aa11.32□□□□□ -0.6
ACTN4-209ENST00000586538 ECHDC3Q96DC8 303 aa11.32□□□□□ -0.6
ACTN4-209ENST00000586538 CCDC97Q96F63 343 aaPredicted RBP11.32□□□□□ -0.6
ACTN4-209ENST00000586538 PEBP4Q96S96 227 aa11.32□□□□□ -0.6
ACTN4-209ENST00000586538 APOOQ9BUR5 198 aa11.32□□□□□ -0.6
ACTN4-209ENST00000586538 LRRC61Q9BV99 259 aa11.32□□□□□ -0.6
ACTN4-209ENST00000586538 NUP85Q9BW27 656 aa11.32□□□□□ -0.6
ACTN4-209ENST00000586538 BOCQ9BWV1 1114 aa11.32□□□□□ -0.6
ACTN4-209ENST00000586538 CBX8Q9HC52 389 aa11.32□□□□□ -0.6
ACTN4-209ENST00000586538 THSD1Q9NS62 852 aa11.32□□□□□ -0.6
ACTN4-209ENST00000586538 CWC15Q9P013 229 aaKnown RBP11.32□□□□□ -0.6
ACTN4-209ENST00000586538 DNPEPQ9ULA0 475 aa11.32□□□□□ -0.6
ACTN4-209ENST00000586538 CAPN11Q9UMQ6 739 aa11.32□□□□□ -0.6
ACTN4-209ENST00000586538 CHD6Q8TD26 2715 aa11.32□□□□□ -0.6
ACTN4-209ENST00000586538 ADAMTS20P59510 1910 aa11.31□□□□□ -0.6
ACTN4-209ENST00000586538 DMXL2Q8TDJ6 3036 aa11.31□□□□□ -0.6
ACTN4-209ENST00000586538 TDRD6O60522 2096 aaKnown RBP11.31□□□□□ -0.6
ACTN4-209ENST00000586538 CPED1A4D0V7 1026 aa11.31□□□□□ -0.6
ACTN4-209ENST00000586538 PSMD11O00231 422 aa11.31□□□□□ -0.6
ACTN4-209ENST00000586538 TNFRSF10CO14798 259 aa11.31□□□□□ -0.6
ACTN4-209ENST00000586538 INSIG1O15503 277 aa11.31□□□□□ -0.6
ACTN4-209ENST00000586538 CSO75390 466 aaKnown RBP11.31□□□□□ -0.6
ACTN4-209ENST00000586538 PCCBP05166 539 aa11.31□□□□□ -0.6
ACTN4-209ENST00000586538 PYGLP06737 847 aa11.31□□□□□ -0.6
ACTN4-209ENST00000586538 HOXC4P09017 264 aaPredicted RBP11.31□□□□□ -0.6
ACTN4-209ENST00000586538 EIF2S3P41091 472 aaKnown RBP11.31□□□□□ -0.6
ACTN4-209ENST00000586538 MLLT3P42568 568 aaPredicted RBP11.31□□□□□ -0.6
ACTN4-209ENST00000586538 UCNP55089 124 aa11.31□□□□□ -0.6
ACTN4-209ENST00000586538 ADKP55263 362 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms