RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 C4orf33Q8N1A6 199 aa10.48□□□□□ -0.73
LIG3-203ENST00000585370 PGBD5Q8N414 524 aa10.48□□□□□ -0.73
LIG3-203ENST00000585370 DCAF4L2Q8NA75 395 aa10.48□□□□□ -0.73
LIG3-203ENST00000585370 SH3RF2Q8TEC5 729 aa10.48□□□□□ -0.73
LIG3-203ENST00000585370 SCG3Q8WXD2 468 aaKnown RBP10.48□□□□□ -0.73
LIG3-203ENST00000585370 GRAMD1AQ96CP6 724 aa10.48□□□□□ -0.73
LIG3-203ENST00000585370 ZNF419Q96HQ0 510 aaPredicted RBP10.48□□□□□ -0.73
LIG3-203ENST00000585370 NUDCD1Q96RS6 583 aa10.48□□□□□ -0.73
LIG3-203ENST00000585370 APOL2Q9BQE5 337 aa10.48□□□□□ -0.73
LIG3-203ENST00000585370 FAM167BQ9BTA0 163 aa10.48□□□□□ -0.73
LIG3-203ENST00000585370 KIF9Q9HAQ2 790 aa10.48□□□□□ -0.73
LIG3-203ENST00000585370 C20orf96Q9NUD7 363 aaPredicted RBP10.48□□□□□ -0.73
LIG3-203ENST00000585370 TDP1Q9NUW8 608 aa10.48□□□□□ -0.73
LIG3-203ENST00000585370 PIH1D1Q9NWS0 290 aaKnown RBP10.48□□□□□ -0.73
LIG3-203ENST00000585370 DNMT3BQ9UBC3 853 aaKnown RBP10.48□□□□□ -0.73
LIG3-203ENST00000585370 DCDC2Q9UHG0 476 aa10.48□□□□□ -0.73
LIG3-203ENST00000585370 OR51B4Q9Y5P0 310 aa10.48□□□□□ -0.73
LIG3-203ENST00000585370 NUMBLQ9Y6R0 609 aa10.48□□□□□ -0.73
LIG3-203ENST00000585370 NYNRINQ9P2P1 1898 aaKnown RBP10.47□□□□□ -0.73
LIG3-203ENST00000585370 NOTCH4Q99466 2003 aa10.47□□□□□ -0.73
LIG3-203ENST00000585370 EBAG9O00559 213 aa10.47□□□□□ -0.73
LIG3-203ENST00000585370 SPAG7O75391 227 aa10.47□□□□□ -0.73
LIG3-203ENST00000585370 RFPL1O75677 317 aa10.47□□□□□ -0.73
LIG3-203ENST00000585370 ZMPSTE24O75844 475 aa10.47□□□□□ -0.73
LIG3-203ENST00000585370 MPOP05164 745 aa10.47□□□□□ -0.73
LIG3-203ENST00000585370 GSTA1P08263 222 aa10.47□□□□□ -0.73
LIG3-203ENST00000585370 VIMP08670 466 aaKnown RBP10.47□□□□□ -0.73
LIG3-203ENST00000585370 ERVK-10P10266 1014 aa10.47□□□□□ -0.73
LIG3-203ENST00000585370 PYGBP11216 843 aa10.47□□□□□ -0.73
LIG3-203ENST00000585370 CR2P20023 1033 aa10.47□□□□□ -0.73
LIG3-203ENST00000585370 NMBRP28336 390 aa10.47□□□□□ -0.73
LIG3-203ENST00000585370 CRHR1P34998 444 aa10.47□□□□□ -0.73
LIG3-203ENST00000585370 RPA3P35244 121 aaPredicted RBP10.47□□□□□ -0.73
LIG3-203ENST00000585370 SGSHP51688 502 aa10.47□□□□□ -0.73
LIG3-203ENST00000585370 NEK3P51956 506 aa10.47□□□□□ -0.73
LIG3-203ENST00000585370 SEC24CP53992 1094 aa10.47□□□□□ -0.73
LIG3-203ENST00000585370 WDR4P57081 412 aaKnown RBP10.47□□□□□ -0.73
LIG3-203ENST00000585370 MAXP61244 160 aa10.47□□□□□ -0.73
LIG3-203ENST00000585370 ZXDBP98169 803 aa10.47□□□□□ -0.73
LIG3-203ENST00000585370 OLIG2Q13516 323 aa10.47□□□□□ -0.73
LIG3-203ENST00000585370 THOC5Q13769 683 aaKnown RBP10.47□□□□□ -0.73
LIG3-203ENST00000585370 DMC1Q14565 340 aa10.47□□□□□ -0.73
LIG3-203ENST00000585370 PCSK7Q16549 785 aa10.47□□□□□ -0.73
LIG3-203ENST00000585370 TSTD2Q5T7W7 516 aa10.47□□□□□ -0.73
LIG3-203ENST00000585370 GKAP1Q5VSY0 366 aaPredicted RBP10.47□□□□□ -0.73
LIG3-203ENST00000585370 PARM1Q6UWI2 310 aa10.47□□□□□ -0.73
LIG3-203ENST00000585370 GALNT7Q86SF2 657 aa10.47□□□□□ -0.73
LIG3-203ENST00000585370 LCA5Q86VQ0 697 aa10.47□□□□□ -0.73
LIG3-203ENST00000585370 MFN1Q8IWA4 741 aa10.47□□□□□ -0.73
LIG3-203ENST00000585370 OR52K2Q8NGK3 314 aa10.47□□□□□ -0.73
LIG3-203ENST00000585370 ITFG1Q8TB96 612 aa10.47□□□□□ -0.73
LIG3-203ENST00000585370 MGARPQ8TDB4 240 aa10.47□□□□□ -0.73
LIG3-203ENST00000585370 BRSK1Q8TDC3 778 aa10.47□□□□□ -0.73
LIG3-203ENST00000585370 ZNF473Q8WTR7 871 aaKnown RBP10.47□□□□□ -0.73
LIG3-203ENST00000585370 FGF14Q92915 247 aa10.47□□□□□ -0.73
LIG3-203ENST00000585370 ISL2Q96A47 359 aa10.47□□□□□ -0.73
LIG3-203ENST00000585370 MFSD3Q96ES6 412 aa10.47□□□□□ -0.73
LIG3-203ENST00000585370 ALG14Q96F25 216 aa10.47□□□□□ -0.73
LIG3-203ENST00000585370 SERAC1Q96JX3 654 aa10.47□□□□□ -0.73
LIG3-203ENST00000585370 SRPK1Q96SB4 655 aaKnown RBP10.47□□□□□ -0.73
LIG3-203ENST00000585370 ADGRE3Q9BY15 652 aa10.47□□□□□ -0.73
LIG3-203ENST00000585370 TBC1D17Q9HA65 648 aa10.47□□□□□ -0.73
LIG3-203ENST00000585370 SCUBE2Q9NQ36 999 aa10.47□□□□□ -0.73
LIG3-203ENST00000585370 SLC2A4RGQ9NR83 387 aa10.47□□□□□ -0.73
LIG3-203ENST00000585370 TREX1Q9NSU2 369 aa10.47□□□□□ -0.73
LIG3-203ENST00000585370 VPS28Q9UK41 221 aa10.47□□□□□ -0.73
LIG3-203ENST00000585370 GRID1Q9ULK0 1009 aa10.47□□□□□ -0.73
LIG3-203ENST00000585370 CHD5Q8TDI0 1954 aa10.46□□□□□ -0.73
LIG3-203ENST00000585370 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.46□□□□□ -0.73
LIG3-203ENST00000585370 MROH6A6NGR9 719 aa10.46□□□□□ -0.73
LIG3-203ENST00000585370 FOXO6A8MYZ6 492 aa10.46□□□□□ -0.73
LIG3-203ENST00000585370 SLC7A4O43246 635 aa10.46□□□□□ -0.73
LIG3-203ENST00000585370 MOSPD3O75425 235 aa10.46□□□□□ -0.73
LIG3-203ENST00000585370 CRTAMO95727 393 aa10.46□□□□□ -0.73
LIG3-203ENST00000585370 DCNP07585 359 aaKnown RBP10.46□□□□□ -0.73
LIG3-203ENST00000585370 ITGA2BP08514 1039 aa10.46□□□□□ -0.73
LIG3-203ENST00000585370 DRD4P21917 467 aa10.46□□□□□ -0.73
LIG3-203ENST00000585370 SCNN1BP51168 640 aa10.46□□□□□ -0.73
LIG3-203ENST00000585370 LIMK2P53671 638 aa10.46□□□□□ -0.73
LIG3-203ENST00000585370 RPL26P61254 145 aaKnown RBP10.46□□□□□ -0.73
LIG3-203ENST00000585370 AP1S1P61966 158 aa10.46□□□□□ -0.73
LIG3-203ENST00000585370 SULT2A1Q06520 285 aa10.46□□□□□ -0.73
LIG3-203ENST00000585370 MSLNQ13421 630 aaPredicted RBP10.46□□□□□ -0.73
LIG3-203ENST00000585370 POU6F1Q14863 301 aa10.46□□□□□ -0.73
LIG3-203ENST00000585370 TEAD2Q15562 447 aa10.46□□□□□ -0.73
LIG3-203ENST00000585370 PDK4Q16654 411 aa10.46□□□□□ -0.73
LIG3-203ENST00000585370 HSP90AA5PQ58FG0 334 aa10.46□□□□□ -0.73
LIG3-203ENST00000585370 SIRPB2Q5JXA9 342 aa10.46□□□□□ -0.73
LIG3-203ENST00000585370 PRSS36Q5K4E3 855 aa10.46□□□□□ -0.73
LIG3-203ENST00000585370 MROH9Q5TGP6 573 aa10.46□□□□□ -0.73
LIG3-203ENST00000585370 LVRNQ6Q4G3 990 aa10.46□□□□□ -0.73
LIG3-203ENST00000585370 CES3Q6UWW8 571 aa10.46□□□□□ -0.73
LIG3-203ENST00000585370 KYAT3Q6YP21 454 aaKnown RBP10.46□□□□□ -0.73
LIG3-203ENST00000585370 STRA8Q7Z7C7 330 aa10.46□□□□□ -0.73
LIG3-203ENST00000585370 BBS7Q8IWZ6 715 aa10.46□□□□□ -0.73
LIG3-203ENST00000585370 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.46□□□□□ -0.73
LIG3-203ENST00000585370 SLC25A41Q8N5S1 370 aa10.46□□□□□ -0.73
LIG3-203ENST00000585370 TCP10LQ8TDR4 215 aa10.46□□□□□ -0.73
LIG3-203ENST00000585370 LRRC8CQ8TDW0 803 aa10.46□□□□□ -0.73
LIG3-203ENST00000585370 STYXQ8WUJ0 223 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms