RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 GGA3Q9NZ52 723 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 ADAMTS5Q9UNA0 930 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 PTPRFP10586 1907 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 SIP14410 1827 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 ATAD5Q96QE3 1844 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 BAHCC1Q9P281 2608 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 TRIM64A6NGJ6 449 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 TRIM64BA6NI03 449 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 CLCA1A8K7I4 914 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 TTC34A8MYJ7 566 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 DHHO43323 396 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 HNRNPRO43390 633 aaKnown RBP2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 DCXO43602 365 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 RRP9O43818 475 aaKnown RBP2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 LARGE1O95461 756 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 IGLV2-14P01704 120 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 EGR2P11161 476 aaPredicted RBP2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 HGFP14210 728 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 EGR1P18146 543 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 PCSK1P29120 753 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 EEF1DP29692 281 aaKnown RBP2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 SKIV2L2P42285 1042 aaKnown RBP2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 MSH2P43246 934 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 SLC6A9P48067 706 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 TDO2P48775 406 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 EVCP57679 992 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 SUMO2P61956 95 aaKnown RBP2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 SNRPFP62306 86 aaKnown RBP2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 TUBA4AP68366 448 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 PRAMEP78395 509 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 TXNL4AP83876 142 aaKnown RBP2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 GABPAQ06546 454 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 MTM1Q13496 603 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 TAF11Q15544 211 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 AARS2Q5JTZ9 985 aaKnown RBP2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 ZNF618Q5T7W0 954 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 MAP3K21Q5TCX8 1036 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 APOBEC3HQ6NTF7 200 aaKnown RBP2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 SLC30A9Q6PML9 568 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 CRELD2Q6UXH1 353 aaPredicted RBP2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 RAPH1Q70E73 1250 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 TTC30BQ8N4P2 665 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 LRRC71Q8N4P6 559 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 TTC39CQ8N584 583 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 FRMD1Q8N878 549 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 NSUN7Q8NE18 718 aaKnown RBP2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 DNAAF1Q8NEP3 725 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 ZMIZ2Q8NF64 920 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 CTCFLQ8NI51 663 aaPredicted RBP2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 AFAP1L1Q8TED9 768 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 SCFD2Q8WU76 684 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 RPL36ALQ969Q0 106 aaKnown RBP2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 ZNF274Q96GC6 653 aaPredicted RBP2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 UBAC1Q9BSL1 405 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 ENKD1Q9H0I2 346 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 RABEP2Q9H5N1 569 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 SEMA4GQ9NTN9 838 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 MIS18AQ9NYP9 233 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 NFKBIL1Q9UBC1 381 aaPredicted RBP2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 HESX1Q9UBX0 185 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 STEAP1Q9UHE8 339 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 HSF4Q9ULV5 492 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 VPS4AQ9UN37 437 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 PCDHGB4Q9UN71 923 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 SCAF8Q9UPN6 1271 aaKnown RBP2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 CNPY2Q9Y2B0 182 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 LYVE1Q9Y5Y7 322 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 A0A087WZ62 844 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 IGKV6D-41A0A0C4DH26 115 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 A0A1W2PS29 197 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 GGPS1O95749 300 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 SCGB1D1O95968 90 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 TK1P04183 234 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 ITGA5P08648 1049 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 TMEM225BP0DP42 221 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 PIM1P11309 404 aaPredicted RBP2□□□□□ -2.09
SMCHD1-211ENST00000584897 CKMT1AP12532 417 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 CAPN3P20807 821 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 NTSR1P30989 418 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 EIF2DP41214 584 aaKnown RBP2□□□□□ -2.09
SMCHD1-211ENST00000584897 CXADRP78310 365 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 GALNT1Q10472 559 aaPredicted RBP2□□□□□ -2.09
SMCHD1-211ENST00000584897 CAMK1Q14012 370 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 BECN1Q14457 450 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 RABEP1Q15276 862 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 TBCEQ15813 527 aaPredicted RBP2□□□□□ -2.09
SMCHD1-211ENST00000584897 SLC5A9Q2M3M2 681 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 EMC10Q5UCC4 262 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 RAP1GAP2Q684P5 730 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 TANGO2Q6ICL3 276 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 CDC42EP5Q6NZY7 148 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 PET117Q6UWS5 81 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 ZDHHC24Q6UX98 284 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 SLC29A4Q7RTT9 530 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 PDSS2Q86YH6 399 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 HSCBQ8IWL3 235 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 POMGNT2Q8NAT1 580 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms