RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 TMEM191CA6NGB0 347 aa20.59■□□□□ 0.89
TOP3A-219ENST00000584887 TOR1BO14657 336 aa20.59■□□□□ 0.89
TOP3A-219ENST00000584887 CTSEP14091 401 aa20.59■□□□□ 0.89
TOP3A-219ENST00000584887 SERPINA4P29622 427 aa20.59■□□□□ 0.89
TOP3A-219ENST00000584887 MMP12P39900 470 aa20.59■□□□□ 0.89
TOP3A-219ENST00000584887 ISXQ2M1V0 245 aa20.59■□□□□ 0.89
TOP3A-219ENST00000584887 C3orf38Q5JPI3 329 aa20.59■□□□□ 0.89
TOP3A-219ENST00000584887 PERM1Q5SV97 790 aa20.59■□□□□ 0.89
TOP3A-219ENST00000584887 C6orf132Q5T0Z8 1188 aa20.59■□□□□ 0.89
TOP3A-219ENST00000584887 ARHGAP36Q6ZRI8 547 aa20.59■□□□□ 0.89
TOP3A-219ENST00000584887 ZSWIM9Q86XI8 627 aa20.59■□□□□ 0.89
TOP3A-219ENST00000584887 NPWQ8N729 165 aa20.59■□□□□ 0.89
TOP3A-219ENST00000584887 HCAR2Q8TDS4 363 aa20.59■□□□□ 0.89
TOP3A-219ENST00000584887 FCRL3Q96P31 734 aaPredicted RBP20.59■□□□□ 0.89
TOP3A-219ENST00000584887 BOCQ9BWV1 1114 aa20.59■□□□□ 0.89
TOP3A-219ENST00000584887 CLPBQ9H078 707 aa20.59■□□□□ 0.89
TOP3A-219ENST00000584887 POLR1BQ9H9Y6 1135 aa20.59■□□□□ 0.89
TOP3A-219ENST00000584887 OR1A2Q9Y585 309 aa20.59■□□□□ 0.89
TOP3A-219ENST00000584887 LRRK1Q38SD2 2015 aa20.58■□□□□ 0.89
TOP3A-219ENST00000584887 EME2A4GXA9 379 aaPredicted RBP20.58■□□□□ 0.89
TOP3A-219ENST00000584887 DDX3XO00571 662 aaKnown RBP eCLIP20.58■□□□□ 0.892e-11■■■□□ 16.2
TOP3A-219ENST00000584887 RIOK3O14730 519 aaKnown RBP20.58■□□□□ 0.89
TOP3A-219ENST00000584887 YY2O15391 372 aa20.58■□□□□ 0.89
TOP3A-219ENST00000584887 RASGRP1O95267 797 aa20.58■□□□□ 0.89
TOP3A-219ENST00000584887 SKILP12757 684 aa20.58■□□□□ 0.89
TOP3A-219ENST00000584887 HTR1BP28222 390 aa20.58■□□□□ 0.89
TOP3A-219ENST00000584887 BLKP51451 505 aa20.58■□□□□ 0.89
TOP3A-219ENST00000584887 PCBP4P57723 403 aaKnown RBP20.58■□□□□ 0.89
TOP3A-219ENST00000584887 INPP5AQ14642 412 aa20.58■□□□□ 0.89
TOP3A-219ENST00000584887 NFATC4Q14934 902 aa20.58■□□□□ 0.89
TOP3A-219ENST00000584887 ALG11Q2TAA5 492 aa20.58■□□□□ 0.89
TOP3A-219ENST00000584887 ESRP1Q6NXG1 681 aaKnown RBP20.58■□□□□ 0.89
TOP3A-219ENST00000584887 CAVIN1Q6NZI2 390 aaKnown RBP20.58■□□□□ 0.89
TOP3A-219ENST00000584887 ENPP7Q6UWV6 458 aa20.58■□□□□ 0.89
TOP3A-219ENST00000584887 RBM44Q6ZP01 1051 aaKnown RBP20.58■□□□□ 0.89
TOP3A-219ENST00000584887 ARHGAP12Q8IWW6 846 aa20.58■□□□□ 0.89
TOP3A-219ENST00000584887 SPACA3Q8IXA5 215 aa20.58■□□□□ 0.89
TOP3A-219ENST00000584887 FSTL5Q8N475 847 aaPredicted RBP20.58■□□□□ 0.89
TOP3A-219ENST00000584887 PCDH19Q8TAB3 1148 aa20.58■□□□□ 0.89
TOP3A-219ENST00000584887 NAT6Q93015 286 aa20.58■□□□□ 0.89
TOP3A-219ENST00000584887 ATXN7L3BQ96GX2 97 aa20.58■□□□□ 0.89
TOP3A-219ENST00000584887 TBATAQ96M53 351 aa20.58■□□□□ 0.89
TOP3A-219ENST00000584887 BPIFA3Q9BQP9 254 aa20.58■□□□□ 0.89
TOP3A-219ENST00000584887 KLQ9UEF7 1012 aa20.58■□□□□ 0.89
TOP3A-219ENST00000584887 PADI4Q9UM07 663 aa20.58■□□□□ 0.89
TOP3A-219ENST00000584887 SCINQ9Y6U3 715 aa20.58■□□□□ 0.89
TOP3A-219ENST00000584887 TMEM110-MUSTN1A8MSY1 372 aa20.57■□□□□ 0.88
TOP3A-219ENST00000584887 LSSP48449 732 aa20.57■□□□□ 0.88
TOP3A-219ENST00000584887 ZNF165P49910 485 aa20.57■□□□□ 0.88
TOP3A-219ENST00000584887 PEX5P50542 639 aa20.57■□□□□ 0.88
TOP3A-219ENST00000584887 HK3P52790 923 aa20.57■□□□□ 0.88
TOP3A-219ENST00000584887 BCL2L1Q07817 233 aa20.57■□□□□ 0.88
TOP3A-219ENST00000584887 ELOCQ15369 112 aa20.57■□□□□ 0.88
TOP3A-219ENST00000584887 FOXR1Q6PIV2 292 aa20.57■□□□□ 0.88
TOP3A-219ENST00000584887 LSMEM2Q8N112 164 aa20.57■□□□□ 0.88
TOP3A-219ENST00000584887 KYQ8NBH2 561 aa20.57■□□□□ 0.88
TOP3A-219ENST00000584887 TPCN2Q8NHX9 752 aa20.57■□□□□ 0.88
TOP3A-219ENST00000584887 FNIP1Q8TF40 1166 aa20.57■□□□□ 0.88
TOP3A-219ENST00000584887 SCG3Q8WXD2 468 aaKnown RBP20.57■□□□□ 0.88
TOP3A-219ENST00000584887 TRIM11Q96F44 468 aa20.57■□□□□ 0.88
TOP3A-219ENST00000584887 ZNF578Q96N58 590 aaPredicted RBP20.57■□□□□ 0.88
TOP3A-219ENST00000584887 NAP1L5Q96NT1 182 aaPredicted RBP20.57■□□□□ 0.88
TOP3A-219ENST00000584887 UBL7Q96S82 380 aaPredicted RBP20.57■□□□□ 0.88
TOP3A-219ENST00000584887 APOOQ9BUR5 198 aa20.57■□□□□ 0.88
TOP3A-219ENST00000584887 PRORYQ9H606 182 aa20.57■□□□□ 0.88
TOP3A-219ENST00000584887 AIPL1Q9NZN9 384 aa20.57■□□□□ 0.88
TOP3A-219ENST00000584887 SATB2Q9UPW6 733 aa20.57■□□□□ 0.88
TOP3A-219ENST00000584887 A0A1W2PQC6 194 aa20.56■□□□□ 0.88
TOP3A-219ENST00000584887 H3BRJ5 948 aa20.56■□□□□ 0.88
TOP3A-219ENST00000584887 LRCH4O75427 683 aa20.56■□□□□ 0.88
TOP3A-219ENST00000584887 SERPINC1P01008 464 aa20.56■□□□□ 0.88
TOP3A-219ENST00000584887 ALPIP09923 528 aa20.56■□□□□ 0.88
TOP3A-219ENST00000584887 GZMAP12544 262 aa20.56■□□□□ 0.88
TOP3A-219ENST00000584887 PRKCIP41743 596 aa20.56■□□□□ 0.88
TOP3A-219ENST00000584887 CSNK1DP48730 415 aa20.56■□□□□ 0.88
TOP3A-219ENST00000584887 SCNN1BP51168 640 aa20.56■□□□□ 0.88
TOP3A-219ENST00000584887 SRP54P61011 504 aaKnown RBP20.56■□□□□ 0.88
TOP3A-219ENST00000584887 TLE3Q04726 772 aa20.56■□□□□ 0.88
TOP3A-219ENST00000584887 SMTNL2Q2TAL5 461 aa20.56■□□□□ 0.88
TOP3A-219ENST00000584887 TDRD12Q587J7 1177 aaKnown RBP20.56■□□□□ 0.88
TOP3A-219ENST00000584887 AFMIDQ63HM1 303 aa20.56■□□□□ 0.88
TOP3A-219ENST00000584887 NYAP1Q6ZVC0 841 aa20.56■□□□□ 0.88
TOP3A-219ENST00000584887 CYP4V2Q6ZWL3 525 aaPredicted RBP20.56■□□□□ 0.88
TOP3A-219ENST00000584887 TP53INP2Q8IXH6 220 aa20.56■□□□□ 0.88
TOP3A-219ENST00000584887 ZNF248Q8NDW4 579 aa20.56■□□□□ 0.88
TOP3A-219ENST00000584887 ATL2Q8NHH9 583 aa20.56■□□□□ 0.88
TOP3A-219ENST00000584887 WDR92Q96MX6 357 aa20.56■□□□□ 0.88
TOP3A-219ENST00000584887 CCDC3Q9BQI4 270 aa20.56■□□□□ 0.88
TOP3A-219ENST00000584887 EDEM3Q9BZQ6 932 aa20.56■□□□□ 0.88
TOP3A-219ENST00000584887 ZWILCHQ9H900 591 aa20.56■□□□□ 0.88
TOP3A-219ENST00000584887 CWC15Q9P013 229 aaKnown RBP20.56■□□□□ 0.88
TOP3A-219ENST00000584887 GPR34Q9UPC5 381 aa20.56■□□□□ 0.88
TOP3A-219ENST00000584887 SHROOM3Q8TF72 1996 aa20.55■□□□□ 0.88
TOP3A-219ENST00000584887 ANKRD36A6QL64 1941 aa20.55■□□□□ 0.88
TOP3A-219ENST00000584887 A0A1B0GTH6 734 aa20.55■□□□□ 0.88
TOP3A-219ENST00000584887 A8MX80 341 aa20.55■□□□□ 0.88
TOP3A-219ENST00000584887 CASC3O15234 703 aaKnown RBP20.55■□□□□ 0.88
TOP3A-219ENST00000584887 ELFN1P0C7U0 828 aa20.55■□□□□ 0.88
TOP3A-219ENST00000584887 RBMS1P29558 406 aaKnown RBP20.55■□□□□ 0.88
TOP3A-219ENST00000584887 ARL4AP40617 200 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms