RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 SYTL3Q4VX76 610 aa3.01□□□□□ -1.93
VAPA-208ENST00000584796 HIST2H2BCQ6DN03 193 aa3.01□□□□□ -1.93
VAPA-208ENST00000584796 DSTYKQ6XUX3 929 aa3.01□□□□□ -1.93
VAPA-208ENST00000584796 MON1BQ7L1V2 547 aa3.01□□□□□ -1.93
VAPA-208ENST00000584796 TRIM74Q86UV6 250 aa3.01□□□□□ -1.93
VAPA-208ENST00000584796 TRIM73Q86UV7 250 aa3.01□□□□□ -1.93
VAPA-208ENST00000584796 GATAD2AQ86YP4 633 aa3.01□□□□□ -1.93
VAPA-208ENST00000584796 MIGA1Q8NAN2 632 aa3.01□□□□□ -1.93
VAPA-208ENST00000584796 SLC2A12Q8TD20 617 aa3.01□□□□□ -1.93
VAPA-208ENST00000584796 HMGB4Q8WW32 186 aa3.01□□□□□ -1.93
VAPA-208ENST00000584796 ADGRG7Q96K78 797 aa3.01□□□□□ -1.93
VAPA-208ENST00000584796 PSMD1Q99460 953 aa3.01□□□□□ -1.93
VAPA-208ENST00000584796 LIN7CQ9NUP9 197 aaKnown RBP3.01□□□□□ -1.93
VAPA-208ENST00000584796 DONSONQ9NYP3 566 aa3.01□□□□□ -1.93
VAPA-208ENST00000584796 SLC45A1Q9Y2W3 748 aa3.01□□□□□ -1.93
VAPA-208ENST00000584796 PCDHGB2Q9Y5G2 931 aa3.01□□□□□ -1.93
VAPA-208ENST00000584796 NCAPD2Q15021 1401 aa3.01□□□□□ -1.93
VAPA-208ENST00000584796 A0A1W2PP64 1363 aa3□□□□□ -1.93
VAPA-208ENST00000584796 SIPA1L3O60292 1781 aaPredicted RBP3□□□□□ -1.93
VAPA-208ENST00000584796 LAMB2P55268 1798 aa3□□□□□ -1.93
VAPA-208ENST00000584796 ZNF541Q9H0D2 1346 aa3□□□□□ -1.93
VAPA-208ENST00000584796 ALPK3Q96L96 1907 aa3□□□□□ -1.93
VAPA-208ENST00000584796 A0A0A0MQY5 61 aa3□□□□□ -1.93
VAPA-208ENST00000584796 GLTPD2A6NH11 291 aa3□□□□□ -1.93
VAPA-208ENST00000584796 GRM8O00222 908 aa3□□□□□ -1.93
VAPA-208ENST00000584796 ASNA1O43681 348 aa3□□□□□ -1.93
VAPA-208ENST00000584796 HEXIM1O94992 359 aaKnown RBP3□□□□□ -1.93
VAPA-208ENST00000584796 DDAH2O95865 285 aa3□□□□□ -1.93
VAPA-208ENST00000584796 MMP3P08254 477 aa3□□□□□ -1.93
VAPA-208ENST00000584796 MYL3P08590 195 aa3□□□□□ -1.93
VAPA-208ENST00000584796 FCGR2AP12318 317 aa3□□□□□ -1.93
VAPA-208ENST00000584796 MXI1P50539 228 aa3□□□□□ -1.93
VAPA-208ENST00000584796 CDK18Q07002 472 aa3□□□□□ -1.93
VAPA-208ENST00000584796 SNTA1Q13424 505 aa3□□□□□ -1.93
VAPA-208ENST00000584796 RRS1Q15050 365 aaKnown RBP3□□□□□ -1.93
VAPA-208ENST00000584796 TBRG1Q3YBR2 411 aa3□□□□□ -1.93
VAPA-208ENST00000584796 HSP90AB2PQ58FF8 381 aa3□□□□□ -1.93
VAPA-208ENST00000584796 MTFR2Q6P444 385 aa3□□□□□ -1.93
VAPA-208ENST00000584796 OLFM4Q6UX06 510 aa3□□□□□ -1.93
VAPA-208ENST00000584796 C11orf96Q7Z7L8 435 aa3□□□□□ -1.93
VAPA-208ENST00000584796 SMIM29Q86T20 159 aa3□□□□□ -1.93
VAPA-208ENST00000584796 SERPINA11Q86U17 422 aa3□□□□□ -1.93
VAPA-208ENST00000584796 PALB2Q86YC2 1186 aa3□□□□□ -1.93
VAPA-208ENST00000584796 FMNL3Q8IVF7 1028 aa3□□□□□ -1.93
VAPA-208ENST00000584796 PJA1Q8NG27 643 aa3□□□□□ -1.93
VAPA-208ENST00000584796 FAR1Q8WVX9 515 aa3□□□□□ -1.93
VAPA-208ENST00000584796 WBP2Q969T9 261 aa3□□□□□ -1.93
VAPA-208ENST00000584796 KIAA1191Q96A73 305 aa3□□□□□ -1.93
VAPA-208ENST00000584796 MYH16Q9H6N6 1097 aa3□□□□□ -1.93
VAPA-208ENST00000584796 CERS4Q9HA82 394 aa3□□□□□ -1.93
VAPA-208ENST00000584796 PDE11AQ9HCR9 933 aa3□□□□□ -1.93
VAPA-208ENST00000584796 SLC25A13Q9UJS0 675 aa3□□□□□ -1.93
VAPA-208ENST00000584796 RIPOR2Q9Y4F9 1068 aa3□□□□□ -1.93
VAPA-208ENST00000584796 PCDHA10Q9Y5I2 948 aa3□□□□□ -1.93
VAPA-208ENST00000584796 RAB3GAP2Q9H2M9 1393 aa3□□□□□ -1.93
VAPA-208ENST00000584796 TTC21AQ8NDW8 1320 aa2.99□□□□□ -1.93
VAPA-208ENST00000584796 COL4A1P02462 1669 aa2.99□□□□□ -1.93
VAPA-208ENST00000584796 ZNF646O15015 1829 aaPredicted RBP2.99□□□□□ -1.93
VAPA-208ENST00000584796 IGLV5-37A0A075B6J1 123 aa2.99□□□□□ -1.93
VAPA-208ENST00000584796 A0A0U1RQJ8 604 aa2.99□□□□□ -1.93
VAPA-208ENST00000584796 ANO9A1A5B4 782 aa2.99□□□□□ -1.93
VAPA-208ENST00000584796 NPIPB13A6NJU9 1138 aa2.99□□□□□ -1.93
VAPA-208ENST00000584796 NPIPB5A8MRT5 1133 aa2.99□□□□□ -1.93
VAPA-208ENST00000584796 NPIPB4C9JG80 1138 aa2.99□□□□□ -1.93
VAPA-208ENST00000584796 EYA2O00167 538 aa2.99□□□□□ -1.93
VAPA-208ENST00000584796 ITM2AO43736 263 aa2.99□□□□□ -1.93
VAPA-208ENST00000584796 PARNO95453 639 aaKnown RBP2.99□□□□□ -1.93
VAPA-208ENST00000584796 VEGFAP15692 232 aaPredicted RBP2.99□□□□□ -1.93
VAPA-208ENST00000584796 HOXC9P31274 260 aa2.99□□□□□ -1.93
VAPA-208ENST00000584796 PCP4P48539 62 aa2.99□□□□□ -1.93
VAPA-208ENST00000584796 CTTNQ14247 550 aaKnown RBP2.99□□□□□ -1.93
VAPA-208ENST00000584796 MYBPC2Q14324 1141 aa2.99□□□□□ -1.93
VAPA-208ENST00000584796 SF3B4Q15427 424 aaKnown RBP eCLIP2.99□□□□□ -1.936e-8■■□□□ 12.7
VAPA-208ENST00000584796 LONRF1Q17RB8 773 aa2.99□□□□□ -1.93
VAPA-208ENST00000584796 GXYLT1Q4G148 440 aa2.99□□□□□ -1.93
VAPA-208ENST00000584796 TBC1D9BQ66K14 1250 aa2.99□□□□□ -1.93
VAPA-208ENST00000584796 ZNF449Q6P9G9 518 aa2.99□□□□□ -1.93
VAPA-208ENST00000584796 RNF144BQ7Z419 303 aa2.99□□□□□ -1.93
VAPA-208ENST00000584796 WDR5BQ86VZ2 330 aa2.99□□□□□ -1.93
VAPA-208ENST00000584796 SCN4BQ8IWT1 228 aa2.99□□□□□ -1.93
VAPA-208ENST00000584796 NAGSQ8N159 534 aa2.99□□□□□ -1.93
VAPA-208ENST00000584796 ZNF114Q8NC26 417 aa2.99□□□□□ -1.93
VAPA-208ENST00000584796 KCNH5Q8NCM2 988 aa2.99□□□□□ -1.93
VAPA-208ENST00000584796 C2CD4CQ8TF44 421 aa2.99□□□□□ -1.93
VAPA-208ENST00000584796 MUL1Q969V5 352 aa2.99□□□□□ -1.93
VAPA-208ENST00000584796 TMEM18Q96B42 140 aa2.99□□□□□ -1.93
VAPA-208ENST00000584796 IL17FQ96PD4 163 aa2.99□□□□□ -1.93
VAPA-208ENST00000584796 IFT27Q9BW83 186 aa2.99□□□□□ -1.93
VAPA-208ENST00000584796 XRN2Q9H0D6 950 aaKnown RBP eCLIP2.99□□□□□ -1.93
VAPA-208ENST00000584796 CDH22Q9UJ99 828 aa2.99□□□□□ -1.93
VAPA-208ENST00000584796 LAMA2P24043 3122 aaKnown RBP2.99□□□□□ -1.93
VAPA-208ENST00000584796 PRUNE2Q8WUY3 3088 aa2.99□□□□□ -1.93
VAPA-208ENST00000584796 GSTM2P28161 218 aa2.98□□□□□ -1.93
VAPA-208ENST00000584796 TM4SF1P30408 202 aa2.98□□□□□ -1.93
VAPA-208ENST00000584796 GLIPR1P48060 266 aa2.98□□□□□ -1.93
VAPA-208ENST00000584796 ADORA2A-AS1P86434 159 aa2.98□□□□□ -1.93
VAPA-208ENST00000584796 ACSM2AQ08AH3 577 aa2.98□□□□□ -1.93
VAPA-208ENST00000584796 ALKBH1Q13686 389 aaKnown RBP2.98□□□□□ -1.93
VAPA-208ENST00000584796 GORABQ5T7V8 394 aa2.98□□□□□ -1.93
VAPA-208ENST00000584796 RETSATQ6NUM9 610 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms