RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 INTUQ9ULD6 942 aa13.26□□□□□ -0.29
ERBB2-220ENST00000584684 LRP4O75096 1905 aa13.25□□□□□ -0.29
ERBB2-220ENST00000584684 H3BM21 787 aa13.25□□□□□ -0.29
ERBB2-220ENST00000584684 HTRA2O43464 458 aaPredicted RBP13.25□□□□□ -0.29
ERBB2-220ENST00000584684 MFSD11O43934 449 aa13.25□□□□□ -0.29
ERBB2-220ENST00000584684 CD48P09326 243 aa13.25□□□□□ -0.29
ERBB2-220ENST00000584684 GIMD1P0DJR0 217 aa13.25□□□□□ -0.29
ERBB2-220ENST00000584684 CKMT2P17540 419 aa13.25□□□□□ -0.29
ERBB2-220ENST00000584684 ACP1P24666 158 aa13.25□□□□□ -0.29
ERBB2-220ENST00000584684 ARHGAP25P42331 645 aa13.25□□□□□ -0.29
ERBB2-220ENST00000584684 ADKP55263 362 aaKnown RBP13.25□□□□□ -0.29
ERBB2-220ENST00000584684 POLR2LP62875 67 aaKnown RBP13.25□□□□□ -0.29
ERBB2-220ENST00000584684 GALNT2Q10471 571 aa13.25□□□□□ -0.29
ERBB2-220ENST00000584684 RALGDSQ12967 914 aa13.25□□□□□ -0.29
ERBB2-220ENST00000584684 PDE1CQ14123 709 aaPredicted RBP13.25□□□□□ -0.29
ERBB2-220ENST00000584684 PTK2BQ14289 1009 aa13.25□□□□□ -0.29
ERBB2-220ENST00000584684 NCBP2-AS2Q69YL0 99 aa13.25□□□□□ -0.29
ERBB2-220ENST00000584684 ALG1LQ6GMV1 187 aa13.25□□□□□ -0.29
ERBB2-220ENST00000584684 MACC1Q6ZN28 852 aa13.25□□□□□ -0.29
ERBB2-220ENST00000584684 DPPA4Q7L190 304 aa13.25□□□□□ -0.29
ERBB2-220ENST00000584684 TMPRSS12Q86WS5 348 aa13.25□□□□□ -0.29
ERBB2-220ENST00000584684 MAP7D3Q8IWC1 876 aa13.25□□□□□ -0.29
ERBB2-220ENST00000584684 BBS5Q8N3I7 341 aa13.25□□□□□ -0.29
ERBB2-220ENST00000584684 TEX26Q8N6G2 289 aa13.25□□□□□ -0.29
ERBB2-220ENST00000584684 ZNF548Q8NEK5 533 aaPredicted RBP13.25□□□□□ -0.29
ERBB2-220ENST00000584684 PCDH19Q8TAB3 1148 aa13.25□□□□□ -0.29
ERBB2-220ENST00000584684 NSMCE1Q8WV22 266 aa13.25□□□□□ -0.29
ERBB2-220ENST00000584684 RFFLQ8WZ73 363 aa13.25□□□□□ -0.29
ERBB2-220ENST00000584684 CHP1Q99653 195 aa13.25□□□□□ -0.29
ERBB2-220ENST00000584684 USP29Q9HBJ7 922 aa13.25□□□□□ -0.29
ERBB2-220ENST00000584684 UCKL1Q9NWZ5 548 aa13.25□□□□□ -0.29
ERBB2-220ENST00000584684 DNAJC28Q9NX36 388 aa13.25□□□□□ -0.29
ERBB2-220ENST00000584684 CSNK1G3Q9Y6M4 447 aa13.25□□□□□ -0.29
ERBB2-220ENST00000584684 ACACAQ13085 2346 aa13.25□□□□□ -0.29
ERBB2-220ENST00000584684 ITPR1Q14643 2758 aa13.25□□□□□ -0.29
ERBB2-220ENST00000584684 CFAP47Q6ZTR5 3102 aa13.24□□□□□ -0.29
ERBB2-220ENST00000584684 KNTC1P50748 2209 aa13.24□□□□□ -0.29
ERBB2-220ENST00000584684 NEMP2A6NFY4 417 aa13.24□□□□□ -0.29
ERBB2-220ENST00000584684 AKR1B15C9JRZ8 316 aaPredicted RBP13.24□□□□□ -0.29
ERBB2-220ENST00000584684 TRIM38O00635 465 aa13.24□□□□□ -0.29
ERBB2-220ENST00000584684 SCAMP1O15126 338 aa13.24□□□□□ -0.29
ERBB2-220ENST00000584684 SIGLEC6O43699 453 aa13.24□□□□□ -0.29
ERBB2-220ENST00000584684 CAPNS1P04632 268 aa13.24□□□□□ -0.29
ERBB2-220ENST00000584684 ALPPL2P10696 532 aa13.24□□□□□ -0.29
ERBB2-220ENST00000584684 ITIH2P19823 946 aa13.24□□□□□ -0.29
ERBB2-220ENST00000584684 GARSP41250 739 aaKnown RBP13.24□□□□□ -0.29
ERBB2-220ENST00000584684 SSR1P43307 286 aaKnown RBP13.24□□□□□ -0.29
ERBB2-220ENST00000584684 MMP13P45452 471 aa13.24□□□□□ -0.29
ERBB2-220ENST00000584684 LIG3P49916 1009 aa13.24□□□□□ -0.29
ERBB2-220ENST00000584684 PEX5P50542 639 aa13.24□□□□□ -0.29
ERBB2-220ENST00000584684 SCNN1BP51168 640 aa13.24□□□□□ -0.29
ERBB2-220ENST00000584684 THOP1P52888 689 aa13.24□□□□□ -0.29
ERBB2-220ENST00000584684 TAS2R40P59535 323 aa13.24□□□□□ -0.29
ERBB2-220ENST00000584684 MMRN1Q13201 1228 aa13.24□□□□□ -0.29
ERBB2-220ENST00000584684 DNAJC3Q13217 504 aa13.24□□□□□ -0.29
ERBB2-220ENST00000584684 LRRC14Q15048 493 aa13.24□□□□□ -0.29
ERBB2-220ENST00000584684 IRF4Q15306 451 aa13.24□□□□□ -0.29
ERBB2-220ENST00000584684 HS1BP3Q53T59 392 aa13.24□□□□□ -0.29
ERBB2-220ENST00000584684 ANKRD20A8PQ5CZ79 823 aa13.24□□□□□ -0.29
ERBB2-220ENST00000584684 TPRG1LQ5T0D9 272 aa13.24□□□□□ -0.29
ERBB2-220ENST00000584684 MARC1Q5VT66 337 aa13.24□□□□□ -0.29
ERBB2-220ENST00000584684 CPNE8Q86YQ8 564 aa13.24□□□□□ -0.29
ERBB2-220ENST00000584684 PGBD5Q8N414 524 aa13.24□□□□□ -0.29
ERBB2-220ENST00000584684 FAM181AQ8N9Y4 354 aa13.24□□□□□ -0.29
ERBB2-220ENST00000584684 KCTD6Q8NC69 237 aa13.24□□□□□ -0.29
ERBB2-220ENST00000584684 SLC35G2Q8TBE7 412 aa13.24□□□□□ -0.29
ERBB2-220ENST00000584684 BTN2A2Q8WVV5 523 aa13.24□□□□□ -0.29
ERBB2-220ENST00000584684 ZCCHC14Q8WYQ9 949 aaKnown RBP13.24□□□□□ -0.29
ERBB2-220ENST00000584684 MAML1Q92585 1016 aa13.24□□□□□ -0.29
ERBB2-220ENST00000584684 NSMCE3Q96MG7 304 aa13.24□□□□□ -0.29
ERBB2-220ENST00000584684 TSGA13Q96PP4 275 aa13.24□□□□□ -0.29
ERBB2-220ENST00000584684 DUSP23Q9BVJ7 150 aa13.24□□□□□ -0.29
ERBB2-220ENST00000584684 SPTLC3Q9NUV7 552 aa13.24□□□□□ -0.29
ERBB2-220ENST00000584684 DKK4Q9UBT3 224 aa13.24□□□□□ -0.29
ERBB2-220ENST00000584684 AMACRQ9UHK6 382 aa13.24□□□□□ -0.29
ERBB2-220ENST00000584684 TDRD6O60522 2096 aaKnown RBP13.24□□□□□ -0.29
ERBB2-220ENST00000584684 GOLGA8CPA6NN73 597 aa13.23□□□□□ -0.29
ERBB2-220ENST00000584684 TMEM110-MUSTN1A8MSY1 372 aa13.23□□□□□ -0.29
ERBB2-220ENST00000584684 CKMT1AP12532 417 aa13.23□□□□□ -0.29
ERBB2-220ENST00000584684 EIF2B5Q13144 721 aaKnown RBP13.23□□□□□ -0.29
ERBB2-220ENST00000584684 MTM1Q13496 603 aa13.23□□□□□ -0.29
ERBB2-220ENST00000584684 WSCD2Q2TBF2 565 aa13.23□□□□□ -0.29
ERBB2-220ENST00000584684 ATP13A4Q4VNC1 1196 aa13.23□□□□□ -0.29
ERBB2-220ENST00000584684 LRRC38Q5VT99 294 aa13.23□□□□□ -0.29
ERBB2-220ENST00000584684 TIGD7Q6NT04 549 aaPredicted RBP13.23□□□□□ -0.29
ERBB2-220ENST00000584684 DHRS13Q6UX07 377 aa13.23□□□□□ -0.29
ERBB2-220ENST00000584684 CACTIN-AS1Q8N1I8 211 aa13.23□□□□□ -0.29
ERBB2-220ENST00000584684 TC2NQ8N9U0 490 aa13.23□□□□□ -0.29
ERBB2-220ENST00000584684 SCUBE2Q9NQ36 999 aa13.23□□□□□ -0.29
ERBB2-220ENST00000584684 MBNL1Q9NR56 388 aaKnown RBP13.23□□□□□ -0.29
ERBB2-220ENST00000584684 NCKIPSDQ9NZQ3 722 aa13.23□□□□□ -0.29
ERBB2-220ENST00000584684 KLF15Q9UIH9 416 aa13.23□□□□□ -0.29
ERBB2-220ENST00000584684 FAM208BQ5VWN6 2430 aa13.23□□□□□ -0.29
ERBB2-220ENST00000584684 ZFYVE26Q68DK2 2539 aa13.22□□□□□ -0.29
ERBB2-220ENST00000584684 ZFHX4Q86UP3 3567 aa13.22□□□□□ -0.29
ERBB2-220ENST00000584684 LY6G6EA0A0G2JKS1 128 aa13.22□□□□□ -0.29
ERBB2-220ENST00000584684 K7ESM1 405 aa13.22□□□□□ -0.29
ERBB2-220ENST00000584684 TPP1O14773 563 aa13.22□□□□□ -0.29
ERBB2-220ENST00000584684 FFAR2O15552 330 aa13.22□□□□□ -0.29
ERBB2-220ENST00000584684 AQP9O43315 295 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms