RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 SEL1L3Q68CR1 1132 aa8.07□□□□□ -1.12
PPP4R1-225ENST00000583438 TRNP1Q6NT89 227 aa8.07□□□□□ -1.12
PPP4R1-225ENST00000583438 FBXL22Q6P050 247 aa8.07□□□□□ -1.12
PPP4R1-225ENST00000583438 GJB7Q6PEY0 223 aa8.07□□□□□ -1.12
PPP4R1-225ENST00000583438 TMC6Q7Z403 805 aa8.07□□□□□ -1.12
PPP4R1-225ENST00000583438 CCAR2Q8N163 923 aaKnown RBP8.07□□□□□ -1.12
PPP4R1-225ENST00000583438 KDM1BQ8NB78 822 aa8.07□□□□□ -1.12
PPP4R1-225ENST00000583438 SPATA20Q8TB22 786 aa8.07□□□□□ -1.12
PPP4R1-225ENST00000583438 IRGQQ8WZA9 623 aa8.07□□□□□ -1.12
PPP4R1-225ENST00000583438 GOLGA1Q92805 767 aa8.07□□□□□ -1.12
PPP4R1-225ENST00000583438 MED15Q96RN5 788 aa8.07□□□□□ -1.12
PPP4R1-225ENST00000583438 OMDQ99983 421 aa8.07□□□□□ -1.12
PPP4R1-225ENST00000583438 PRDM14Q9GZV8 571 aa8.07□□□□□ -1.12
PPP4R1-225ENST00000583438 ERVMER34-1Q9H9K5 563 aa8.07□□□□□ -1.12
PPP4R1-225ENST00000583438 GPR27Q9NS67 375 aa8.07□□□□□ -1.12
PPP4R1-225ENST00000583438 CNTN6Q9UQ52 1028 aa8.07□□□□□ -1.12
PPP4R1-225ENST00000583438 PCDHB4Q9Y5E5 795 aa8.07□□□□□ -1.12
PPP4R1-225ENST00000583438 ZFC3H1O60293 1989 aaKnown RBP8.07□□□□□ -1.12
PPP4R1-225ENST00000583438 UNC13CQ8NB66 2214 aa8.07□□□□□ -1.12
PPP4R1-225ENST00000583438 UTP20O75691 2785 aaKnown RBP8.06□□□□□ -1.12
PPP4R1-225ENST00000583438 TBC1D3DA0A087WVF3 549 aa8.06□□□□□ -1.12
PPP4R1-225ENST00000583438 TBC1D3IA0A087WXS9 549 aa8.06□□□□□ -1.12
PPP4R1-225ENST00000583438 TBC1D3EA0A087X179 549 aa8.06□□□□□ -1.12
PPP4R1-225ENST00000583438 TBC1D3KA0A087X1G2 549 aa8.06□□□□□ -1.12
PPP4R1-225ENST00000583438 SHISA3A0PJX4 238 aa8.06□□□□□ -1.12
PPP4R1-225ENST00000583438 TARSL2A2RTX5 802 aaKnown RBP8.06□□□□□ -1.12
PPP4R1-225ENST00000583438 TBC1D3FA6NER0 549 aaPredicted RBP8.06□□□□□ -1.12
PPP4R1-225ENST00000583438 LRRC72A6NJI9 287 aa8.06□□□□□ -1.12
PPP4R1-225ENST00000583438 TBC1D3LB9A6J9 549 aa8.06□□□□□ -1.12
PPP4R1-225ENST00000583438 SLC16A3O15427 465 aaKnown RBP8.06□□□□□ -1.12
PPP4R1-225ENST00000583438 SLC31A1O15431 190 aa8.06□□□□□ -1.12
PPP4R1-225ENST00000583438 CBFA2T2O43439 604 aa8.06□□□□□ -1.12
PPP4R1-225ENST00000583438 PIAS2O75928 621 aa8.06□□□□□ -1.12
PPP4R1-225ENST00000583438 TRUB2O95900 331 aaKnown RBP8.06□□□□□ -1.12
PPP4R1-225ENST00000583438 MT-CO3P00414 261 aa8.06□□□□□ -1.12
PPP4R1-225ENST00000583438 MYL1P05976 194 aa8.06□□□□□ -1.12
PPP4R1-225ENST00000583438 PAEPP09466 180 aa8.06□□□□□ -1.12
PPP4R1-225ENST00000583438 C1SP09871 688 aa8.06□□□□□ -1.12
PPP4R1-225ENST00000583438 TBC1D3HP0C7X1 549 aa8.06□□□□□ -1.12
PPP4R1-225ENST00000583438 EPB41P11171 864 aaKnown RBP8.06□□□□□ -1.12
PPP4R1-225ENST00000583438 TGM2P21980 687 aa8.06□□□□□ -1.12
PPP4R1-225ENST00000583438 SLC11A2P49281 568 aa8.06□□□□□ -1.12
PPP4R1-225ENST00000583438 PLK1P53350 603 aa8.06□□□□□ -1.12
PPP4R1-225ENST00000583438 NCAPHQ15003 741 aa8.06□□□□□ -1.12
PPP4R1-225ENST00000583438 IFI16Q16666 785 aaKnown RBP8.06□□□□□ -1.12
PPP4R1-225ENST00000583438 ANKRD39Q53RE8 183 aa8.06□□□□□ -1.12
PPP4R1-225ENST00000583438 RAB6CQ53S08 254 aa8.06□□□□□ -1.12
PPP4R1-225ENST00000583438 ALFQ53S48 1182 aa8.06□□□□□ -1.12
PPP4R1-225ENST00000583438 KCTD16Q68DU8 428 aa8.06□□□□□ -1.12
PPP4R1-225ENST00000583438 TBC1D3GQ6DHY5 549 aa8.06□□□□□ -1.12
PPP4R1-225ENST00000583438 ISM2Q6H9L7 571 aa8.06□□□□□ -1.12
PPP4R1-225ENST00000583438 OR6B2Q6IFH4 312 aa8.06□□□□□ -1.12
PPP4R1-225ENST00000583438 TBC1D3CQ6IPX1 549 aa8.06□□□□□ -1.12
PPP4R1-225ENST00000583438 TTI2Q6NXR4 508 aa8.06□□□□□ -1.12
PPP4R1-225ENST00000583438 CRTC1Q6UUV9 634 aa8.06□□□□□ -1.12
PPP4R1-225ENST00000583438 GPR155Q7Z3F1 870 aa8.06□□□□□ -1.12
PPP4R1-225ENST00000583438 TMC3Q7Z5M5 1100 aa8.06□□□□□ -1.12
PPP4R1-225ENST00000583438 TRIM69Q86WT6 500 aa8.06□□□□□ -1.12
PPP4R1-225ENST00000583438 CHSY1Q86X52 802 aa8.06□□□□□ -1.12
PPP4R1-225ENST00000583438 TBC1D3Q8IZP1 549 aaPredicted RBP8.06□□□□□ -1.12
PPP4R1-225ENST00000583438 ENGASEQ8NFI3 743 aa8.06□□□□□ -1.12
PPP4R1-225ENST00000583438 OR4C6Q8NH72 309 aa8.06□□□□□ -1.12
PPP4R1-225ENST00000583438 PIWIL2Q8TC59 973 aaKnown RBP8.06□□□□□ -1.12
PPP4R1-225ENST00000583438 FGF11Q92914 225 aa8.06□□□□□ -1.12
PPP4R1-225ENST00000583438 RAB6CQ9H0N0 254 aa8.06□□□□□ -1.12
PPP4R1-225ENST00000583438 TCEAL2Q9H3H9 227 aaPredicted RBP8.06□□□□□ -1.12
PPP4R1-225ENST00000583438 SIRPGQ9P1W8 387 aa8.06□□□□□ -1.12
PPP4R1-225ENST00000583438 HESX1Q9UBX0 185 aa8.06□□□□□ -1.12
PPP4R1-225ENST00000583438 ZNF212Q9UDV6 495 aa8.06□□□□□ -1.12
PPP4R1-225ENST00000583438 USP25Q9UHP3 1055 aa8.06□□□□□ -1.12
PPP4R1-225ENST00000583438 SCML1Q9UN30 329 aa8.06□□□□□ -1.12
PPP4R1-225ENST00000583438 CLCA2Q9UQC9 943 aa8.06□□□□□ -1.12
PPP4R1-225ENST00000583438 ZNF451Q9Y4E5 1061 aa8.06□□□□□ -1.12
PPP4R1-225ENST00000583438 A0A0D9SEW6 157 aa8.05□□□□□ -1.12
PPP4R1-225ENST00000583438 A0A1W2PQ27 194 aa8.05□□□□□ -1.12
PPP4R1-225ENST00000583438 A0A1W2PQ64 194 aa8.05□□□□□ -1.12
PPP4R1-225ENST00000583438 A0A1W2PQU0 124 aa8.05□□□□□ -1.12
PPP4R1-225ENST00000583438 POM121BA6NF01 834 aa8.05□□□□□ -1.12
PPP4R1-225ENST00000583438 WASH4PA8MWX3 477 aa8.05□□□□□ -1.12
PPP4R1-225ENST00000583438 OPA1O60313 960 aa8.05□□□□□ -1.12
PPP4R1-225ENST00000583438 DFNA5O60443 496 aa8.05□□□□□ -1.12
PPP4R1-225ENST00000583438 GRAP2O75791 330 aa8.05□□□□□ -1.12
PPP4R1-225ENST00000583438 CD160O95971 181 aa8.05□□□□□ -1.12
PPP4R1-225ENST00000583438 PNMA6AP0CW24 399 aaPredicted RBP8.05□□□□□ -1.12
PPP4R1-225ENST00000583438 SRCP12931 536 aa8.05□□□□□ -1.12
PPP4R1-225ENST00000583438 RRM1P23921 792 aa8.05□□□□□ -1.12
PPP4R1-225ENST00000583438 RPL13P26373 211 aaKnown RBP8.05□□□□□ -1.12
PPP4R1-225ENST00000583438 HNF1BP35680 557 aa8.05□□□□□ -1.12
PPP4R1-225ENST00000583438 CFHR1Q03591 330 aa8.05□□□□□ -1.12
PPP4R1-225ENST00000583438 COBLL1Q53SF7 1204 aa8.05□□□□□ -1.12
PPP4R1-225ENST00000583438 ARHGAP40Q5TG30 622 aa8.05□□□□□ -1.12
PPP4R1-225ENST00000583438 KIAA1614Q5VZ46 1190 aa8.05□□□□□ -1.12
PPP4R1-225ENST00000583438 ATL3Q6DD88 541 aa8.05□□□□□ -1.12
PPP4R1-225ENST00000583438 UNC45BQ8IWX7 931 aa8.05□□□□□ -1.12
PPP4R1-225ENST00000583438 PPM1KQ8N3J5 372 aa8.05□□□□□ -1.12
PPP4R1-225ENST00000583438 SH2D3CQ8N5H7 860 aa8.05□□□□□ -1.12
PPP4R1-225ENST00000583438 OR2A12Q8NGT7 310 aa8.05□□□□□ -1.12
PPP4R1-225ENST00000583438 FAM149B1Q96BN6 582 aa8.05□□□□□ -1.12
PPP4R1-225ENST00000583438 BMFQ96LC9 184 aa8.05□□□□□ -1.12
PPP4R1-225ENST00000583438 APOLD1Q96LR9 279 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms