RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 AK2P54819 239 aa4.28□□□□□ -1.72
SMCHD1-208ENST00000583344 MYBPC2Q14324 1141 aa4.28□□□□□ -1.72
SMCHD1-208ENST00000583344 ZACNQ401N2 412 aa4.28□□□□□ -1.72
SMCHD1-208ENST00000583344 CAVIN1Q6NZI2 390 aaKnown RBP4.28□□□□□ -1.72
SMCHD1-208ENST00000583344 SASS6Q6UVJ0 657 aa4.28□□□□□ -1.72
SMCHD1-208ENST00000583344 MON1BQ7L1V2 547 aa4.28□□□□□ -1.72
SMCHD1-208ENST00000583344 SCN4BQ8IWT1 228 aa4.28□□□□□ -1.72
SMCHD1-208ENST00000583344 FAM184AQ8NB25 1140 aa4.28□□□□□ -1.72
SMCHD1-208ENST00000583344 SGCZQ96LD1 299 aa4.28□□□□□ -1.72
SMCHD1-208ENST00000583344 SCLT1Q96NL6 688 aa4.28□□□□□ -1.72
SMCHD1-208ENST00000583344 DUX5Q96PT3 197 aa4.28□□□□□ -1.72
SMCHD1-208ENST00000583344 FRG2BQ96QU4 278 aa4.28□□□□□ -1.72
SMCHD1-208ENST00000583344 IFT27Q9BW83 186 aa4.28□□□□□ -1.72
SMCHD1-208ENST00000583344 ACAD9Q9H845 621 aa4.28□□□□□ -1.72
SMCHD1-208ENST00000583344 PLCB1Q9NQ66 1216 aa4.28□□□□□ -1.72
SMCHD1-208ENST00000583344 TCF7L2Q9NQB0 619 aa4.28□□□□□ -1.72
SMCHD1-208ENST00000583344 SLC22A11Q9NSA0 550 aa4.28□□□□□ -1.72
SMCHD1-208ENST00000583344 DONSONQ9NYP3 566 aa4.28□□□□□ -1.72
SMCHD1-208ENST00000583344 STK26Q9P289 416 aa4.28□□□□□ -1.72
SMCHD1-208ENST00000583344 SEL1LQ9UBV2 794 aa4.28□□□□□ -1.72
SMCHD1-208ENST00000583344 CDC23Q9UJX2 597 aa4.28□□□□□ -1.72
SMCHD1-208ENST00000583344 FBXO9Q9UK97 447 aaPredicted RBP4.28□□□□□ -1.72
SMCHD1-208ENST00000583344 CDK12Q9NYV4 1490 aaPredicted RBP4.28□□□□□ -1.72
SMCHD1-208ENST00000583344 ATP10DQ9P241 1426 aa4.28□□□□□ -1.72
SMCHD1-208ENST00000583344 MAP2P11137 1827 aaKnown RBP4.28□□□□□ -1.72
SMCHD1-208ENST00000583344 MED1Q15648 1581 aaPredicted RBP4.27□□□□□ -1.73
SMCHD1-208ENST00000583344 KNDC1Q76NI1 1749 aa4.27□□□□□ -1.73
SMCHD1-208ENST00000583344 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.27□□□□□ -1.73
SMCHD1-208ENST00000583344 HTATSF1O43719 755 aaKnown RBP4.27□□□□□ -1.73
SMCHD1-208ENST00000583344 SERPINI2O75830 405 aa4.27□□□□□ -1.73
SMCHD1-208ENST00000583344 IGLV2-11P01706 119 aa4.27□□□□□ -1.73
SMCHD1-208ENST00000583344 CYP21A2P08686 494 aa4.27□□□□□ -1.73
SMCHD1-208ENST00000583344 RFC1P35251 1148 aaPredicted RBP4.27□□□□□ -1.73
SMCHD1-208ENST00000583344 POU3F1Q03052 451 aaPredicted RBP4.27□□□□□ -1.73
SMCHD1-208ENST00000583344 CHAF1AQ13111 956 aaPredicted RBP4.27□□□□□ -1.73
SMCHD1-208ENST00000583344 ALKBH1Q13686 389 aaKnown RBP4.27□□□□□ -1.73
SMCHD1-208ENST00000583344 STARD3Q14849 445 aa4.27□□□□□ -1.73
SMCHD1-208ENST00000583344 ZRSR1Q15695 479 aaKnown RBP4.27□□□□□ -1.73
SMCHD1-208ENST00000583344 GALNTL6Q49A17 601 aa4.27□□□□□ -1.73
SMCHD1-208ENST00000583344 FBXL22Q6P050 247 aa4.27□□□□□ -1.73
SMCHD1-208ENST00000583344 MEX3BQ6ZN04 569 aaKnown RBP4.27□□□□□ -1.73
SMCHD1-208ENST00000583344 SERPINA11Q86U17 422 aa4.27□□□□□ -1.73
SMCHD1-208ENST00000583344 WDR5BQ86VZ2 330 aa4.27□□□□□ -1.73
SMCHD1-208ENST00000583344 RFLNBQ8N5W9 214 aa4.27□□□□□ -1.73
SMCHD1-208ENST00000583344 TMEM163Q8TC26 289 aa4.27□□□□□ -1.73
SMCHD1-208ENST00000583344 FAM71BQ8TC56 605 aa4.27□□□□□ -1.73
SMCHD1-208ENST00000583344 SLC2A12Q8TD20 617 aa4.27□□□□□ -1.73
SMCHD1-208ENST00000583344 HDAC7Q8WUI4 952 aa4.27□□□□□ -1.73
SMCHD1-208ENST00000583344 SYAP1Q96A49 352 aaPredicted RBP4.27□□□□□ -1.73
SMCHD1-208ENST00000583344 ARRDC3Q96B67 414 aa4.27□□□□□ -1.73
SMCHD1-208ENST00000583344 TXNDC15Q96J42 360 aa4.27□□□□□ -1.73
SMCHD1-208ENST00000583344 SLC25A33Q9BSK2 321 aa4.27□□□□□ -1.73
SMCHD1-208ENST00000583344 SPRY4Q9C004 299 aa4.27□□□□□ -1.73
SMCHD1-208ENST00000583344 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.27□□□□□ -1.73
SMCHD1-208ENST00000583344 BRD8Q9H0E9 1235 aa4.27□□□□□ -1.73
SMCHD1-208ENST00000583344 ZHX3Q9H4I2 956 aa4.27□□□□□ -1.73
SMCHD1-208ENST00000583344 SDF2L1Q9HCN8 221 aa4.27□□□□□ -1.73
SMCHD1-208ENST00000583344 NLRC4Q9NPP4 1024 aa4.27□□□□□ -1.73
SMCHD1-208ENST00000583344 BABAM1Q9NWV8 329 aa4.27□□□□□ -1.73
SMCHD1-208ENST00000583344 AGO1Q9UL18 857 aaKnown RBP4.27□□□□□ -1.73
SMCHD1-208ENST00000583344 DAPP1Q9UN19 280 aa4.27□□□□□ -1.73
SMCHD1-208ENST00000583344 RGS12O14924 1447 aa4.27□□□□□ -1.73
SMCHD1-208ENST00000583344 SSH2Q76I76 1423 aa4.27□□□□□ -1.73
SMCHD1-208ENST00000583344 C17orf102A2RUQ5 167 aa4.26□□□□□ -1.73
SMCHD1-208ENST00000583344 KRT36O76013 467 aa4.26□□□□□ -1.73
SMCHD1-208ENST00000583344 TPM3P06753 285 aa4.26□□□□□ -1.73
SMCHD1-208ENST00000583344 F7P08709 466 aaPredicted RBP4.26□□□□□ -1.73
SMCHD1-208ENST00000583344 HMOX1P09601 288 aa4.26□□□□□ -1.73
SMCHD1-208ENST00000583344 ENO3P13929 434 aaPredicted RBP4.26□□□□□ -1.73
SMCHD1-208ENST00000583344 CHMLP26374 656 aa4.26□□□□□ -1.73
SMCHD1-208ENST00000583344 SERPINB3P29508 390 aa4.26□□□□□ -1.73
SMCHD1-208ENST00000583344 HMGN5P82970 282 aaKnown RBP4.26□□□□□ -1.73
SMCHD1-208ENST00000583344 CTTNQ14247 550 aaKnown RBP4.26□□□□□ -1.73
SMCHD1-208ENST00000583344 SPARCL1Q14515 664 aa4.26□□□□□ -1.73
SMCHD1-208ENST00000583344 TBRG1Q3YBR2 411 aa4.26□□□□□ -1.73
SMCHD1-208ENST00000583344 ALFQ53S48 1182 aa4.26□□□□□ -1.73
SMCHD1-208ENST00000583344 CCDC70Q6NSX1 233 aa4.26□□□□□ -1.73
SMCHD1-208ENST00000583344 TOGARAM2Q6ZUX3 1019 aa4.26□□□□□ -1.73
SMCHD1-208ENST00000583344 SRLQ86TD4 932 aa4.26□□□□□ -1.73
SMCHD1-208ENST00000583344 ZNF354CQ86Y25 554 aa4.26□□□□□ -1.73
SMCHD1-208ENST00000583344 FAM186BQ8IYM0 893 aa4.26□□□□□ -1.73
SMCHD1-208ENST00000583344 SPATA20Q8TB22 786 aa4.26□□□□□ -1.73
SMCHD1-208ENST00000583344 DEPTORQ8TB45 409 aa4.26□□□□□ -1.73
SMCHD1-208ENST00000583344 TMEM255BQ8WV15 326 aa4.26□□□□□ -1.73
SMCHD1-208ENST00000583344 RSC1A1Q92681 617 aa4.26□□□□□ -1.73
SMCHD1-208ENST00000583344 COG3Q96JB2 828 aa4.26□□□□□ -1.73
SMCHD1-208ENST00000583344 ADGRG7Q96K78 797 aa4.26□□□□□ -1.73
SMCHD1-208ENST00000583344 MYD88Q99836 296 aa4.26□□□□□ -1.73
SMCHD1-208ENST00000583344 HERPUD2Q9BSE4 406 aa4.26□□□□□ -1.73
SMCHD1-208ENST00000583344 RTKNQ9BST9 563 aa4.26□□□□□ -1.73
SMCHD1-208ENST00000583344 THUMPD2Q9BTF0 503 aaKnown RBP4.26□□□□□ -1.73
SMCHD1-208ENST00000583344 CLPBQ9H078 707 aa4.26□□□□□ -1.73
SMCHD1-208ENST00000583344 TSPY26PQ9H489 355 aa4.26□□□□□ -1.73
SMCHD1-208ENST00000583344 OBP2BQ9NPH6 170 aa4.26□□□□□ -1.73
SMCHD1-208ENST00000583344 LUZP4Q9P127 313 aa4.26□□□□□ -1.73
SMCHD1-208ENST00000583344 UPB1Q9UBR1 384 aa4.26□□□□□ -1.73
SMCHD1-208ENST00000583344 SWAP70Q9UH65 585 aa4.26□□□□□ -1.73
SMCHD1-208ENST00000583344 PRDM4Q9UKN5 801 aa4.26□□□□□ -1.73
SMCHD1-208ENST00000583344 OSGIN2Q9Y236 505 aa4.26□□□□□ -1.73
SMCHD1-208ENST00000583344 STRCQ7RTU9 1775 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms