RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 FOXD4Q12950 439 aaPredicted RBP5.79□□□□□ -1.48
SMARCE1-219ENST00000583294 MYBPC2Q14324 1141 aa5.79□□□□□ -1.48
SMARCE1-219ENST00000583294 FGFBP1Q14512 234 aa5.79□□□□□ -1.48
SMARCE1-219ENST00000583294 CCNG2Q16589 344 aa5.79□□□□□ -1.48
SMARCE1-219ENST00000583294 HIST2H2BCQ6DN03 193 aa5.79□□□□□ -1.48
SMARCE1-219ENST00000583294 HIST2H2BDQ6DRA6 164 aa5.79□□□□□ -1.48
SMARCE1-219ENST00000583294 TTI2Q6NXR4 508 aa5.79□□□□□ -1.48
SMARCE1-219ENST00000583294 KLHL24Q6TFL4 600 aa5.79□□□□□ -1.48
SMARCE1-219ENST00000583294 CYP20A1Q6UW02 462 aa5.79□□□□□ -1.48
SMARCE1-219ENST00000583294 TRILQ7L0X0 811 aa5.79□□□□□ -1.48
SMARCE1-219ENST00000583294 ADSSL1Q8N142 457 aa5.79□□□□□ -1.48
SMARCE1-219ENST00000583294 PSPC1Q8WXF1 523 aaKnown RBP5.79□□□□□ -1.48
SMARCE1-219ENST00000583294 WDFY2Q96P53 400 aa5.79□□□□□ -1.48
SMARCE1-219ENST00000583294 C1QTNF7Q9BXJ2 289 aa5.79□□□□□ -1.48
SMARCE1-219ENST00000583294 POLR1BQ9H9Y6 1135 aa5.79□□□□□ -1.48
SMARCE1-219ENST00000583294 SCPEP1Q9HB40 452 aa5.79□□□□□ -1.48
SMARCE1-219ENST00000583294 MAGEE1Q9HCI5 957 aa5.79□□□□□ -1.48
SMARCE1-219ENST00000583294 CYSLTR2Q9NS75 346 aa5.79□□□□□ -1.48
SMARCE1-219ENST00000583294 TBC1D22BQ9NU19 505 aa5.79□□□□□ -1.48
SMARCE1-219ENST00000583294 SRPRBQ9Y5M8 271 aaKnown RBP5.79□□□□□ -1.48
SMARCE1-219ENST00000583294 RAI2Q9Y5P3 530 aa5.79□□□□□ -1.48
SMARCE1-219ENST00000583294 CACNA1IQ9P0X4 2223 aa5.78□□□□□ -1.48
SMARCE1-219ENST00000583294 B4DGG1 531 aa5.78□□□□□ -1.48
SMARCE1-219ENST00000583294 ITM2AO43736 263 aa5.78□□□□□ -1.48
SMARCE1-219ENST00000583294 HNRNPCL1O60812 293 aaKnown RBP5.78□□□□□ -1.48
SMARCE1-219ENST00000583294 MTA2O94776 668 aa5.78□□□□□ -1.48
SMARCE1-219ENST00000583294 CDK4P11802 303 aa5.78□□□□□ -1.48
SMARCE1-219ENST00000583294 KRT10P13645 584 aa5.78□□□□□ -1.48
SMARCE1-219ENST00000583294 HOXB2P14652 356 aa5.78□□□□□ -1.48
SMARCE1-219ENST00000583294 PSMA4P25789 261 aaKnown RBP5.78□□□□□ -1.48
SMARCE1-219ENST00000583294 SHMT1P34896 483 aa5.78□□□□□ -1.48
SMARCE1-219ENST00000583294 ARF3P61204 181 aaPredicted RBP5.78□□□□□ -1.48
SMARCE1-219ENST00000583294 ARF1P84077 181 aaKnown RBP5.78□□□□□ -1.48
SMARCE1-219ENST00000583294 MAMLD1Q13495 774 aa5.78□□□□□ -1.48
SMARCE1-219ENST00000583294 EIF4A2Q14240 407 aaKnown RBP5.78□□□□□ -1.48
SMARCE1-219ENST00000583294 TCTN1Q2MV58 587 aa5.78□□□□□ -1.48
SMARCE1-219ENST00000583294 DPCR1Q3MIW9 517 aa5.78□□□□□ -1.48
SMARCE1-219ENST00000583294 LEXMQ3ZCV2 418 aa5.78□□□□□ -1.48
SMARCE1-219ENST00000583294 ITPRIPL1Q6GPH6 555 aa5.78□□□□□ -1.48
SMARCE1-219ENST00000583294 NEK10Q6ZWH5 1172 aa5.78□□□□□ -1.48
SMARCE1-219ENST00000583294 IKBIPQ70UQ0 350 aa5.78□□□□□ -1.48
SMARCE1-219ENST00000583294 GSTA5Q7RTV2 222 aa5.78□□□□□ -1.48
SMARCE1-219ENST00000583294 C1QL2Q7Z5L3 287 aa5.78□□□□□ -1.48
SMARCE1-219ENST00000583294 FRMD1Q8N878 549 aa5.78□□□□□ -1.48
SMARCE1-219ENST00000583294 TMEM116Q8NCL8 245 aa5.78□□□□□ -1.48
SMARCE1-219ENST00000583294 ARRDC2Q8TBH0 407 aa5.78□□□□□ -1.48
SMARCE1-219ENST00000583294 FBXL8Q96CD0 374 aa5.78□□□□□ -1.48
SMARCE1-219ENST00000583294 ZNF48Q96MX3 618 aaPredicted RBP5.78□□□□□ -1.48
SMARCE1-219ENST00000583294 ZNF570Q96NI8 536 aa5.78□□□□□ -1.48
SMARCE1-219ENST00000583294 FAM234AQ9H0X4 552 aa5.78□□□□□ -1.48
SMARCE1-219ENST00000583294 PLAC1Q9HBJ0 212 aa5.78□□□□□ -1.48
SMARCE1-219ENST00000583294 EIF2B3Q9NR50 452 aaKnown RBP5.78□□□□□ -1.48
SMARCE1-219ENST00000583294 TMEM51Q9NW97 253 aa5.78□□□□□ -1.48
SMARCE1-219ENST00000583294 PLK2Q9NYY3 685 aa5.78□□□□□ -1.48
SMARCE1-219ENST00000583294 CORO1CQ9ULV4 474 aaPredicted RBP5.78□□□□□ -1.48
SMARCE1-219ENST00000583294 LAS1LQ9Y4W2 734 aaKnown RBP5.78□□□□□ -1.48
SMARCE1-219ENST00000583294 A0A1B0GVT2 93 aa5.77□□□□□ -1.49
SMARCE1-219ENST00000583294 FSD2A1L4K1 749 aa5.77□□□□□ -1.49
SMARCE1-219ENST00000583294 DOK2O60496 412 aa5.77□□□□□ -1.49
SMARCE1-219ENST00000583294 PAGE4O60829 102 aa5.77□□□□□ -1.49
SMARCE1-219ENST00000583294 PTP4A3O75365 173 aa5.77□□□□□ -1.49
SMARCE1-219ENST00000583294 SCGB1D1O95968 90 aa5.77□□□□□ -1.49
SMARCE1-219ENST00000583294 CRYABP02511 175 aaKnown RBP5.77□□□□□ -1.49
SMARCE1-219ENST00000583294 LCATP04180 440 aa5.77□□□□□ -1.49
SMARCE1-219ENST00000583294 ACADMP11310 421 aa5.77□□□□□ -1.49
SMARCE1-219ENST00000583294 LAMP2P13473 410 aa5.77□□□□□ -1.49
SMARCE1-219ENST00000583294 IL7RP16871 459 aa5.77□□□□□ -1.49
SMARCE1-219ENST00000583294 MYF6P23409 242 aa5.77□□□□□ -1.49
SMARCE1-219ENST00000583294 CDAP32320 146 aa5.77□□□□□ -1.49
SMARCE1-219ENST00000583294 PIGAP37287 484 aa5.77□□□□□ -1.49
SMARCE1-219ENST00000583294 CASP2P42575 452 aa5.77□□□□□ -1.49
SMARCE1-219ENST00000583294 SORDQ00796 357 aa5.77□□□□□ -1.49
SMARCE1-219ENST00000583294 GOLGA8DPQ0D2H9 430 aa5.77□□□□□ -1.49
SMARCE1-219ENST00000583294 SGO1Q5FBB7 561 aa5.77□□□□□ -1.49
SMARCE1-219ENST00000583294 FNBP1LQ5T0N5 605 aa5.77□□□□□ -1.49
SMARCE1-219ENST00000583294 LRCH2Q5VUJ6 765 aa5.77□□□□□ -1.49
SMARCE1-219ENST00000583294 OTUD1Q5VV17 481 aaPredicted RBP5.77□□□□□ -1.49
SMARCE1-219ENST00000583294 PATL1Q86TB9 770 aaKnown RBP5.77□□□□□ -1.49
SMARCE1-219ENST00000583294 HAPLN4Q86UW8 402 aa5.77□□□□□ -1.49
SMARCE1-219ENST00000583294 SLC35F3Q8IY50 421 aa5.77□□□□□ -1.49
SMARCE1-219ENST00000583294 CCDC105Q8IYK2 499 aa5.77□□□□□ -1.49
SMARCE1-219ENST00000583294 TMEM163Q8TC26 289 aa5.77□□□□□ -1.49
SMARCE1-219ENST00000583294 ASB5Q8WWX0 329 aa5.77□□□□□ -1.49
SMARCE1-219ENST00000583294 SMG7Q92540 1137 aaKnown RBP5.77□□□□□ -1.49
SMARCE1-219ENST00000583294 USP6NLQ92738 828 aa5.77□□□□□ -1.49
SMARCE1-219ENST00000583294 SNAPC3Q92966 411 aa5.77□□□□□ -1.49
SMARCE1-219ENST00000583294 ERGIC1Q969X5 290 aa5.77□□□□□ -1.49
SMARCE1-219ENST00000583294 OTULINQ96BN8 352 aa5.77□□□□□ -1.49
SMARCE1-219ENST00000583294 SDF4Q9BRK5 362 aa5.77□□□□□ -1.49
SMARCE1-219ENST00000583294 FTOQ9C0B1 505 aaKnown RBP eCLIP5.77□□□□□ -1.49
SMARCE1-219ENST00000583294 RBM38Q9H0Z9 239 aaKnown RBP5.77□□□□□ -1.49
SMARCE1-219ENST00000583294 FBRSL1Q9HCM7 1045 aaKnown RBP5.77□□□□□ -1.49
SMARCE1-219ENST00000583294 DDX4Q9NQI0 724 aaKnown RBP5.77□□□□□ -1.49
SMARCE1-219ENST00000583294 ASAH2Q9NR71 780 aa5.77□□□□□ -1.49
SMARCE1-219ENST00000583294 SEPT11Q9NVA2 429 aaKnown RBP5.77□□□□□ -1.49
SMARCE1-219ENST00000583294 CISD1Q9NZ45 108 aaKnown RBP5.77□□□□□ -1.49
SMARCE1-219ENST00000583294 EHD2Q9NZN4 543 aa5.77□□□□□ -1.49
SMARCE1-219ENST00000583294 AAR2Q9Y312 384 aaKnown RBP5.77□□□□□ -1.49
SMARCE1-219ENST00000583294 PRSS47A8MTI9 375 aa5.76□□□□□ -1.49
SMARCE1-219ENST00000583294 TAF4O00268 1085 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms