RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 TMEM237Q96Q45 408 aa22.79■■□□□ 1.24
CCDC47-204ENST00000582252 C1QTNF1Q9BXJ1 281 aa22.79■■□□□ 1.24
CCDC47-204ENST00000582252 MUC3BQ9H195 1237 aa22.79■■□□□ 1.24
CCDC47-204ENST00000582252 NKX2-4Q9H2Z4 354 aa22.79■■□□□ 1.24
CCDC47-204ENST00000582252 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP22.79■■□□□ 1.24
CCDC47-204ENST00000582252 CAMSAP3Q9P1Y5 1249 aaPredicted RBP22.79■■□□□ 1.24
CCDC47-204ENST00000582252 DNAJC16Q9Y2G8 782 aa22.79■■□□□ 1.24
CCDC47-204ENST00000582252 OBSL1O75147 1896 aa22.79■■□□□ 1.24
CCDC47-204ENST00000582252 MUSKO15146 869 aa22.79■■□□□ 1.24
CCDC47-204ENST00000582252 TSPAN3O60637 253 aa22.79■■□□□ 1.24
CCDC47-204ENST00000582252 F11P03951 625 aa22.79■■□□□ 1.24
CCDC47-204ENST00000582252 F7P08709 466 aaPredicted RBP22.79■■□□□ 1.24
CCDC47-204ENST00000582252 SLC35E2BP0CK96 405 aa22.79■■□□□ 1.24
CCDC47-204ENST00000582252 SMAD3P84022 425 aaKnown RBP22.79■■□□□ 1.24
CCDC47-204ENST00000582252 PARP9Q8IXQ6 854 aa22.79■■□□□ 1.24
CCDC47-204ENST00000582252 ACVR1CQ8NER5 493 aa22.79■■□□□ 1.24
CCDC47-204ENST00000582252 OR13J1Q8NGT2 312 aa22.79■■□□□ 1.24
CCDC47-204ENST00000582252 OR6P1Q8NGX9 317 aa22.79■■□□□ 1.24
CCDC47-204ENST00000582252 BRSK1Q8TDC3 778 aa22.79■■□□□ 1.24
CCDC47-204ENST00000582252 SLC28A3Q9HAS3 691 aa22.79■■□□□ 1.24
CCDC47-204ENST00000582252 SCUBE2Q9NQ36 999 aa22.79■■□□□ 1.24
CCDC47-204ENST00000582252 HAO1Q9UJM8 370 aa22.79■■□□□ 1.24
CCDC47-204ENST00000582252 LSM7Q9UK45 103 aaKnown RBP22.79■■□□□ 1.24
CCDC47-204ENST00000582252 RUVBL2Q9Y230 463 aaKnown RBP22.79■■□□□ 1.24
CCDC47-204ENST00000582252 DENND4CQ5VZ89 1909 aa22.78■■□□□ 1.24
CCDC47-204ENST00000582252 TTC24A2A3L6 582 aaPredicted RBP22.78■■□□□ 1.24
CCDC47-204ENST00000582252 G3V2L1 256 aa22.78■■□□□ 1.24
CCDC47-204ENST00000582252 INSIG1O15503 277 aa22.78■■□□□ 1.24
CCDC47-204ENST00000582252 PHGDHO43175 533 aaKnown RBP22.78■■□□□ 1.24
CCDC47-204ENST00000582252 HNRNPH1P31943 449 aaKnown RBP22.78■■□□□ 1.24
CCDC47-204ENST00000582252 IRS1P35568 1242 aa22.78■■□□□ 1.24
CCDC47-204ENST00000582252 KCNJ2P63252 427 aa22.78■■□□□ 1.24
CCDC47-204ENST00000582252 ACVR1Q04771 509 aa22.78■■□□□ 1.24
CCDC47-204ENST00000582252 NSUN2Q08J23 767 aaKnown RBP eCLIP22.78■■□□□ 1.24
CCDC47-204ENST00000582252 TBCCQ15814 346 aa22.78■■□□□ 1.24
CCDC47-204ENST00000582252 RNF219Q5W0B1 726 aaPredicted RBP22.78■■□□□ 1.24
CCDC47-204ENST00000582252 ZYG11AQ6WRX3 759 aa22.78■■□□□ 1.24
CCDC47-204ENST00000582252 KREMEN2Q8NCW0 462 aa22.78■■□□□ 1.24
CCDC47-204ENST00000582252 OR6Y1Q8NGX8 325 aa22.78■■□□□ 1.24
CCDC47-204ENST00000582252 C20orf27Q9GZN8 174 aa22.78■■□□□ 1.24
CCDC47-204ENST00000582252 FBXO6Q9NRD1 293 aaPredicted RBP22.78■■□□□ 1.24
CCDC47-204ENST00000582252 MARCOQ9UEW3 520 aaPredicted RBP22.78■■□□□ 1.24
CCDC47-204ENST00000582252 CORO1CQ9ULV4 474 aaPredicted RBP22.78■■□□□ 1.24
CCDC47-204ENST00000582252 FCHO1O14526 889 aa22.77■■□□□ 1.24
CCDC47-204ENST00000582252 TRAFD1O14545 582 aaPredicted RBP22.77■■□□□ 1.24
CCDC47-204ENST00000582252 LDB2O43679 373 aa22.77■■□□□ 1.24
CCDC47-204ENST00000582252 MGRN1O60291 552 aa22.77■■□□□ 1.24
CCDC47-204ENST00000582252 KLHL2O95198 593 aa22.77■■□□□ 1.24
CCDC47-204ENST00000582252 CRTAMO95727 393 aa22.77■■□□□ 1.24
CCDC47-204ENST00000582252 SPATA31D3P0C874 917 aa22.77■■□□□ 1.24
CCDC47-204ENST00000582252 HOXB8P17481 243 aaPredicted RBP22.77■■□□□ 1.24
CCDC47-204ENST00000582252 IHHQ14623 411 aa22.77■■□□□ 1.24
CCDC47-204ENST00000582252 CTC1Q2NKJ3 1217 aa22.77■■□□□ 1.24
CCDC47-204ENST00000582252 LRRC8EQ6NSJ5 796 aa22.77■■□□□ 1.24
CCDC47-204ENST00000582252 SPATA31D4Q6ZUB0 917 aa22.77■■□□□ 1.24
CCDC47-204ENST00000582252 RTL10Q7L3V2 364 aa22.77■■□□□ 1.24
CCDC47-204ENST00000582252 CILP2Q8IUL8 1156 aa22.77■■□□□ 1.24
CCDC47-204ENST00000582252 OR52K2Q8NGK3 314 aa22.77■■□□□ 1.24
CCDC47-204ENST00000582252 TTC8Q8TAM2 541 aa22.77■■□□□ 1.24
CCDC47-204ENST00000582252 BLOC1S5Q8TDH9 187 aa22.77■■□□□ 1.24
CCDC47-204ENST00000582252 STYXQ8WUJ0 223 aa22.77■■□□□ 1.24
CCDC47-204ENST00000582252 SCG3Q8WXD2 468 aaKnown RBP22.77■■□□□ 1.24
CCDC47-204ENST00000582252 MRPS31Q92665 395 aaKnown RBP22.77■■□□□ 1.24
CCDC47-204ENST00000582252 NSL1Q96IY1 281 aa22.77■■□□□ 1.24
CCDC47-204ENST00000582252 RILPQ96NA2 401 aa22.77■■□□□ 1.24
CCDC47-204ENST00000582252 LMAN2LQ9H0V9 348 aa22.77■■□□□ 1.24
CCDC47-204ENST00000582252 ZNF395Q9H8N7 513 aaPredicted RBP22.77■■□□□ 1.24
CCDC47-204ENST00000582252 SMPD4Q9NXE4 827 aa22.77■■□□□ 1.24
CCDC47-204ENST00000582252 SORCS3Q9UPU3 1222 aa22.77■■□□□ 1.24
CCDC47-204ENST00000582252 ZNF510Q9Y2H8 683 aa22.77■■□□□ 1.24
CCDC47-204ENST00000582252 H0Y626 953 aa22.77■■□□□ 1.23
CCDC47-204ENST00000582252 CBX4O00257 560 aa22.77■■□□□ 1.23
CCDC47-204ENST00000582252 ITM2AO43736 263 aa22.77■■□□□ 1.23
CCDC47-204ENST00000582252 HSPA4LO95757 839 aa22.77■■□□□ 1.23
CCDC47-204ENST00000582252 OLFM2O95897 454 aa22.77■■□□□ 1.23
CCDC47-204ENST00000582252 LRG1P02750 347 aa22.77■■□□□ 1.23
CCDC47-204ENST00000582252 CALB2P22676 271 aa22.77■■□□□ 1.23
CCDC47-204ENST00000582252 PTPN4P29074 926 aa22.77■■□□□ 1.23
CCDC47-204ENST00000582252 AVPR1AP37288 418 aa22.77■■□□□ 1.23
CCDC47-204ENST00000582252 SGSHP51688 502 aa22.77■■□□□ 1.23
CCDC47-204ENST00000582252 CLCN4P51793 760 aa22.77■■□□□ 1.23
CCDC47-204ENST00000582252 LIPMQ5VYY2 423 aa22.77■■□□□ 1.23
CCDC47-204ENST00000582252 TMEM150AQ86TG1 271 aa22.77■■□□□ 1.23
CCDC47-204ENST00000582252 DDX51Q8N8A6 666 aaKnown RBP eCLIP22.77■■□□□ 1.23
CCDC47-204ENST00000582252 HDAC10Q969S8 669 aa22.77■■□□□ 1.23
CCDC47-204ENST00000582252 NUDCD1Q96RS6 583 aa22.77■■□□□ 1.23
CCDC47-204ENST00000582252 ZNF334Q9HCZ1 680 aaPredicted RBP22.77■■□□□ 1.23
CCDC47-204ENST00000582252 OXSMQ9NWU1 459 aa22.77■■□□□ 1.23
CCDC47-204ENST00000582252 CDH23Q9H251 3354 aa22.76■■□□□ 1.23
CCDC47-204ENST00000582252 TBL1XO60907 577 aa22.76■■□□□ 1.23
CCDC47-204ENST00000582252 LYPLA1O75608 230 aaPredicted RBP22.76■■□□□ 1.23
CCDC47-204ENST00000582252 RPP40O75818 363 aaKnown RBP22.76■■□□□ 1.23
CCDC47-204ENST00000582252 CBX6O95503 412 aa22.76■■□□□ 1.23
CCDC47-204ENST00000582252 C8AP07357 584 aa22.76■■□□□ 1.23
CCDC47-204ENST00000582252 T-ENOLP0DO92 83 aa22.76■■□□□ 1.23
CCDC47-204ENST00000582252 HDCP19113 662 aa22.76■■□□□ 1.23
CCDC47-204ENST00000582252 HK2P52789 917 aa22.76■■□□□ 1.23
CCDC47-204ENST00000582252 RIPK1Q13546 671 aa22.76■■□□□ 1.23
CCDC47-204ENST00000582252 GALNT3Q14435 633 aa22.76■■□□□ 1.23
CCDC47-204ENST00000582252 SNCBQ16143 134 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms