RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 NSUN2Q08J23 767 aaKnown RBP eCLIP21.1■□□□□ 0.97
CCDC42-203ENST00000581598 LZTR1Q8N653 840 aa21.1■□□□□ 0.97
CCDC42-203ENST00000581598 MBNL1Q9NR56 388 aaKnown RBP21.1■□□□□ 0.97
CCDC42-203ENST00000581598 BZW2Q9Y6E2 419 aaKnown RBP21.1■□□□□ 0.97
CCDC42-203ENST00000581598 AK5Q9Y6K8 562 aa21.1■□□□□ 0.97
CCDC42-203ENST00000581598 ASXL3Q9C0F0 2248 aa21.1■□□□□ 0.97
CCDC42-203ENST00000581598 TMEM110-MUSTN1A8MSY1 372 aa21.09■□□□□ 0.97
CCDC42-203ENST00000581598 PALMO75781 387 aa21.09■□□□□ 0.97
CCDC42-203ENST00000581598 DPYSQ14117 519 aa21.09■□□□□ 0.97
CCDC42-203ENST00000581598 PPP6R3Q5H9R7 873 aaPredicted RBP21.09■□□□□ 0.97
CCDC42-203ENST00000581598 HGSNATQ68CP4 663 aa21.09■□□□□ 0.97
CCDC42-203ENST00000581598 ERAP2Q6P179 960 aa21.09■□□□□ 0.97
CCDC42-203ENST00000581598 KDM7AQ6ZMT4 941 aa21.09■□□□□ 0.97
CCDC42-203ENST00000581598 SRLQ86TD4 932 aa21.09■□□□□ 0.97
CCDC42-203ENST00000581598 PDZD3Q86UT5 571 aa21.09■□□□□ 0.97
CCDC42-203ENST00000581598 PHACTR4Q8IZ21 702 aa21.09■□□□□ 0.97
CCDC42-203ENST00000581598 LMX1AQ8TE12 382 aa21.09■□□□□ 0.97
CCDC42-203ENST00000581598 HNRNPLLQ8WVV9 542 aaKnown RBP21.09■□□□□ 0.97
CCDC42-203ENST00000581598 ECHDC3Q96DC8 303 aa21.09■□□□□ 0.97
CCDC42-203ENST00000581598 WRAP53Q9BUR4 548 aaKnown RBP21.09■□□□□ 0.97
CCDC42-203ENST00000581598 ATP13A3Q9H7F0 1226 aa21.09■□□□□ 0.97
CCDC42-203ENST00000581598 ZWILCHQ9H900 591 aa21.09■□□□□ 0.97
CCDC42-203ENST00000581598 PCDH12Q9NPG4 1184 aa21.09■□□□□ 0.97
CCDC42-203ENST00000581598 CWC15Q9P013 229 aaKnown RBP21.09■□□□□ 0.97
CCDC42-203ENST00000581598 APOBEC3BQ9UH17 382 aaKnown RBP21.09■□□□□ 0.97
CCDC42-203ENST00000581598 SKILP12757 684 aa21.08■□□□□ 0.97
CCDC42-203ENST00000581598 C6P13671 934 aa21.08■□□□□ 0.97
CCDC42-203ENST00000581598 SERPINA4P29622 427 aa21.08■□□□□ 0.97
CCDC42-203ENST00000581598 EIF4A3P38919 411 aaKnown RBP21.08■□□□□ 0.97
CCDC42-203ENST00000581598 MMP12P39900 470 aa21.08■□□□□ 0.97
CCDC42-203ENST00000581598 RGRP47804 291 aa21.08■□□□□ 0.97
CCDC42-203ENST00000581598 LRRC14Q15048 493 aa21.08■□□□□ 0.97
CCDC42-203ENST00000581598 IRF4Q15306 451 aa21.08■□□□□ 0.97
CCDC42-203ENST00000581598 DPYSL2Q16555 572 aa21.08■□□□□ 0.97
CCDC42-203ENST00000581598 WSCD2Q2TBF2 565 aa21.08■□□□□ 0.97
CCDC42-203ENST00000581598 BOLA3Q53S33 107 aa21.08■□□□□ 0.97
CCDC42-203ENST00000581598 CFAP58Q5T655 872 aa21.08■□□□□ 0.97
CCDC42-203ENST00000581598 NPWQ8N729 165 aa21.08■□□□□ 0.97
CCDC42-203ENST00000581598 TSEN2Q8NCE0 465 aaKnown RBP21.08■□□□□ 0.97
CCDC42-203ENST00000581598 SNIP1Q8TAD8 396 aaKnown RBP21.08■□□□□ 0.97
CCDC42-203ENST00000581598 IL12RB2Q99665 862 aa21.08■□□□□ 0.97
CCDC42-203ENST00000581598 CINPQ9BW66 212 aaPredicted RBP21.08■□□□□ 0.97
CCDC42-203ENST00000581598 BOCQ9BWV1 1114 aa21.08■□□□□ 0.97
CCDC42-203ENST00000581598 SP110Q9HB58 689 aa21.08■□□□□ 0.97
CCDC42-203ENST00000581598 PNMA8BQ9ULN7 279 aaPredicted RBP21.08■□□□□ 0.97
CCDC42-203ENST00000581598 ATP8A1Q9Y2Q0 1164 aa21.08■□□□□ 0.97
CCDC42-203ENST00000581598 LRP4O75096 1905 aa21.08■□□□□ 0.96
CCDC42-203ENST00000581598 COL27A1Q8IZC6 1860 aaPredicted RBP21.07■□□□□ 0.96
CCDC42-203ENST00000581598 LOC400499M0QZD8 3231 aa21.07■□□□□ 0.96
CCDC42-203ENST00000581598 EME2A4GXA9 379 aaPredicted RBP21.07■□□□□ 0.96
CCDC42-203ENST00000581598 LMO7DNF2Z398 122 aa21.07■□□□□ 0.96
CCDC42-203ENST00000581598 TLX3O43711 291 aaPredicted RBP21.07■□□□□ 0.96
CCDC42-203ENST00000581598 EIF2S3P41091 472 aaKnown RBP21.07■□□□□ 0.96
CCDC42-203ENST00000581598 BLKP51451 505 aa21.07■□□□□ 0.96
CCDC42-203ENST00000581598 ZSWIM9Q86XI8 627 aa21.07■□□□□ 0.96
CCDC42-203ENST00000581598 CAMK1DQ8IU85 385 aa21.07■□□□□ 0.96
CCDC42-203ENST00000581598 RBFAQ8N0V3 343 aa21.07■□□□□ 0.96
CCDC42-203ENST00000581598 IFI44Q8TCB0 444 aa21.07■□□□□ 0.96
CCDC42-203ENST00000581598 SPOCK2Q92563 424 aa21.07■□□□□ 0.96
CCDC42-203ENST00000581598 ZNF599Q96NL3 588 aa21.07■□□□□ 0.96
CCDC42-203ENST00000581598 DEPDC7Q96QD5 511 aa21.07■□□□□ 0.96
CCDC42-203ENST00000581598 PSKH2Q96QS6 385 aa21.07■□□□□ 0.96
CCDC42-203ENST00000581598 LRRC61Q9BV99 259 aa21.07■□□□□ 0.96
CCDC42-203ENST00000581598 SLC13A1Q9BZW2 595 aa21.07■□□□□ 0.96
CCDC42-203ENST00000581598 MYO1AQ9UBC5 1043 aa21.07■□□□□ 0.96
CCDC42-203ENST00000581598 FASNP49327 2511 aaKnown RBP21.07■□□□□ 0.96
CCDC42-203ENST00000581598 H3BRJ5 948 aa21.06■□□□□ 0.96
CCDC42-203ENST00000581598 DFFAO00273 331 aa21.06■□□□□ 0.96
CCDC42-203ENST00000581598 GCATO75600 419 aa21.06■□□□□ 0.96
CCDC42-203ENST00000581598 MYF5P13349 255 aa21.06■□□□□ 0.96
CCDC42-203ENST00000581598 IL1R2P27930 398 aa21.06■□□□□ 0.96
CCDC42-203ENST00000581598 RENBPP51606 427 aa21.06■□□□□ 0.96
CCDC42-203ENST00000581598 SEMG2Q02383 582 aa21.06■□□□□ 0.96
CCDC42-203ENST00000581598 PPARDQ03181 441 aa21.06■□□□□ 0.96
CCDC42-203ENST00000581598 PIGHQ14442 188 aaPredicted RBP21.06■□□□□ 0.96
CCDC42-203ENST00000581598 TSR1Q2NL82 804 aaKnown RBP21.06■□□□□ 0.96
CCDC42-203ENST00000581598 DEFB133Q30KQ1 61 aa21.06■□□□□ 0.96
CCDC42-203ENST00000581598 PRRT3Q5FWE3 981 aa21.06■□□□□ 0.96
CCDC42-203ENST00000581598 C6orf132Q5T0Z8 1188 aa21.06■□□□□ 0.96
CCDC42-203ENST00000581598 TMCO4Q5TGY1 634 aa21.06■□□□□ 0.96
CCDC42-203ENST00000581598 ARHGAP36Q6ZRI8 547 aa21.06■□□□□ 0.96
CCDC42-203ENST00000581598 TMEM139Q8IV31 216 aa21.06■□□□□ 0.96
CCDC42-203ENST00000581598 NIPA2Q8N8Q9 360 aa21.06■□□□□ 0.96
CCDC42-203ENST00000581598 TPCN2Q8NHX9 752 aa21.06■□□□□ 0.96
CCDC42-203ENST00000581598 GLMNQ92990 594 aa21.06■□□□□ 0.96
CCDC42-203ENST00000581598 TCEAL2Q9H3H9 227 aaPredicted RBP21.06■□□□□ 0.96
CCDC42-203ENST00000581598 SEPT3Q9UH03 358 aa21.06■□□□□ 0.96
CCDC42-203ENST00000581598 COQ6Q9Y2Z9 468 aa21.06■□□□□ 0.96
CCDC42-203ENST00000581598 RP1P56715 2156 aa21.06■□□□□ 0.96
CCDC42-203ENST00000581598 TRAFD1O14545 582 aaPredicted RBP21.05■□□□□ 0.96
CCDC42-203ENST00000581598 BRINP1O60477 761 aa21.05■□□□□ 0.96
CCDC42-203ENST00000581598 SERPING1P05155 500 aa21.05■□□□□ 0.96
CCDC42-203ENST00000581598 PTMAP06454 111 aaKnown RBP21.05■□□□□ 0.96
CCDC42-203ENST00000581598 ACTN2P35609 894 aa21.05■□□□□ 0.96
CCDC42-203ENST00000581598 ARL4AP40617 200 aa21.05■□□□□ 0.96
CCDC42-203ENST00000581598 RPIAP49247 311 aa21.05■□□□□ 0.96
CCDC42-203ENST00000581598 LIG3P49916 1009 aa21.05■□□□□ 0.96
CCDC42-203ENST00000581598 AP1S1P61966 158 aa21.05■□□□□ 0.96
CCDC42-203ENST00000581598 POLR2LP62875 67 aaKnown RBP21.05■□□□□ 0.96
CCDC42-203ENST00000581598 BCL2L1Q07817 233 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms