RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 IFT20Q8IY31 132 aa14.38□□□□□ -0.11
SKA2-205ENST00000580541 TAB3Q8N5C8 712 aaPredicted RBP14.38□□□□□ -0.11
SKA2-205ENST00000580541 NOA1Q8NC60 698 aaKnown RBP14.38□□□□□ -0.11
SKA2-205ENST00000580541 UBXN4Q92575 508 aa14.38□□□□□ -0.11
SKA2-205ENST00000580541 SCRN2Q96FV2 425 aa14.38□□□□□ -0.11
SKA2-205ENST00000580541 HHIPQ96QV1 700 aa14.38□□□□□ -0.11
SKA2-205ENST00000580541 FICDQ9BVA6 458 aa14.38□□□□□ -0.11
SKA2-205ENST00000580541 TRIM31Q9BZY9 425 aa14.38□□□□□ -0.11
SKA2-205ENST00000580541 TSPYL1Q9H0U9 437 aa14.38□□□□□ -0.11
SKA2-205ENST00000580541 TRABDQ9H4I3 376 aa14.38□□□□□ -0.11
SKA2-205ENST00000580541 SGK2Q9HBY8 427 aa14.38□□□□□ -0.11
SKA2-205ENST00000580541 ARNT2Q9HBZ2 717 aa14.38□□□□□ -0.11
SKA2-205ENST00000580541 XAB2Q9HCS7 855 aaKnown RBP14.38□□□□□ -0.11
SKA2-205ENST00000580541 PPIL1Q9Y3C6 166 aa14.38□□□□□ -0.11
SKA2-205ENST00000580541 TRIOO75962 3097 aa14.38□□□□□ -0.11
SKA2-205ENST00000580541 VCANP13611 3396 aa14.37□□□□□ -0.11
SKA2-205ENST00000580541 AXIN1O15169 862 aa14.37□□□□□ -0.11
SKA2-205ENST00000580541 TSPAN6O43657 245 aa14.37□□□□□ -0.11
SKA2-205ENST00000580541 AP1G1O43747 822 aa14.37□□□□□ -0.11
SKA2-205ENST00000580541 GJB3O75712 270 aa14.37□□□□□ -0.11
SKA2-205ENST00000580541 MLNP12872 115 aa14.37□□□□□ -0.11
SKA2-205ENST00000580541 ADRB3P13945 408 aa14.37□□□□□ -0.11
SKA2-205ENST00000580541 TIMP2P16035 220 aa14.37□□□□□ -0.11
SKA2-205ENST00000580541 ADRA1AP35348 466 aa14.37□□□□□ -0.11
SKA2-205ENST00000580541 NPY2RP49146 381 aa14.37□□□□□ -0.11
SKA2-205ENST00000580541 PDE1BQ01064 536 aa14.37□□□□□ -0.11
SKA2-205ENST00000580541 TMEM31Q5JXX7 168 aa14.37□□□□□ -0.11
SKA2-205ENST00000580541 NEK5Q6P3R8 708 aa14.37□□□□□ -0.11
SKA2-205ENST00000580541 C11orf74Q86VG3 221 aa14.37□□□□□ -0.11
SKA2-205ENST00000580541 TMEM105Q8N8V8 129 aa14.37□□□□□ -0.11
SKA2-205ENST00000580541 LPCAT1Q8NF37 534 aa14.37□□□□□ -0.11
SKA2-205ENST00000580541 PIH1D2Q8WWB5 315 aa14.37□□□□□ -0.11
SKA2-205ENST00000580541 CPT1BQ92523 772 aa14.37□□□□□ -0.11
SKA2-205ENST00000580541 ERLEC1Q96DZ1 483 aa14.37□□□□□ -0.11
SKA2-205ENST00000580541 SPACA7Q96KW9 195 aa14.37□□□□□ -0.11
SKA2-205ENST00000580541 TRIM51Q9BSJ1 452 aa14.37□□□□□ -0.11
SKA2-205ENST00000580541 BTBD1Q9H0C5 482 aa14.37□□□□□ -0.11
SKA2-205ENST00000580541 MAGEE1Q9HCI5 957 aa14.37□□□□□ -0.11
SKA2-205ENST00000580541 KCTD5Q9NXV2 234 aa14.37□□□□□ -0.11
SKA2-205ENST00000580541 BFARQ9NZS9 450 aa14.37□□□□□ -0.11
SKA2-205ENST00000580541 SHOC2Q9UQ13 582 aa14.37□□□□□ -0.11
SKA2-205ENST00000580541 SNX24Q9Y343 169 aa14.37□□□□□ -0.11
SKA2-205ENST00000580541 A0A0C4DFX4 3053 aa14.36□□□□□ -0.11
SKA2-205ENST00000580541 ZDBF2Q9HCK1 2354 aa14.36□□□□□ -0.11
SKA2-205ENST00000580541 CACNA1IQ9P0X4 2223 aa14.36□□□□□ -0.11
SKA2-205ENST00000580541 A0A0J9YYE9 177 aa14.36□□□□□ -0.11
SKA2-205ENST00000580541 A0A1W2PP55 124 aa14.36□□□□□ -0.11
SKA2-205ENST00000580541 MAGEB16A2A368 324 aa14.36□□□□□ -0.11
SKA2-205ENST00000580541 LRRC72A6NJI9 287 aa14.36□□□□□ -0.11
SKA2-205ENST00000580541 SEC31AO94979 1220 aaKnown RBP14.36□□□□□ -0.11
SKA2-205ENST00000580541 AGTP01019 485 aa14.36□□□□□ -0.11
SKA2-205ENST00000580541 PRLP01236 227 aa14.36□□□□□ -0.11
SKA2-205ENST00000580541 IGLV3-19P01714 112 aa14.36□□□□□ -0.11
SKA2-205ENST00000580541 TRBC1P01850 177 aa14.36□□□□□ -0.11
SKA2-205ENST00000580541 TUBBP07437 444 aa14.36□□□□□ -0.11
SKA2-205ENST00000580541 PDHA1P08559 390 aa14.36□□□□□ -0.11
SKA2-205ENST00000580541 MCM3P25205 808 aa14.36□□□□□ -0.11
SKA2-205ENST00000580541 P2RY2P41231 377 aa14.36□□□□□ -0.11
SKA2-205ENST00000580541 TPMTP51580 245 aa14.36□□□□□ -0.11
SKA2-205ENST00000580541 FAM193AP78312 1265 aa14.36□□□□□ -0.11
SKA2-205ENST00000580541 SLC7A5Q01650 507 aa14.36□□□□□ -0.11
SKA2-205ENST00000580541 GUCY2DQ02846 1103 aa14.36□□□□□ -0.11
SKA2-205ENST00000580541 CNTN1Q12860 1018 aa14.36□□□□□ -0.11
SKA2-205ENST00000580541 CUL1Q13616 776 aa14.36□□□□□ -0.11
SKA2-205ENST00000580541 ARHGEF7Q14155 803 aa14.36□□□□□ -0.11
SKA2-205ENST00000580541 KCNJ11Q14654 390 aa14.36□□□□□ -0.11
SKA2-205ENST00000580541 POM121L1PQ3SYA9 428 aa14.36□□□□□ -0.11
SKA2-205ENST00000580541 SIRPB2Q5JXA9 342 aa14.36□□□□□ -0.11
SKA2-205ENST00000580541 TEX35Q5T0J7 233 aa14.36□□□□□ -0.11
SKA2-205ENST00000580541 RNASEH2BQ5TBB1 312 aaKnown RBP14.36□□□□□ -0.11
SKA2-205ENST00000580541 LRRC8BQ6P9F7 803 aa14.36□□□□□ -0.11
SKA2-205ENST00000580541 SLC36A4Q6YBV0 504 aa14.36□□□□□ -0.11
SKA2-205ENST00000580541 PARS2Q7L3T8 475 aaKnown RBP14.36□□□□□ -0.11
SKA2-205ENST00000580541 RAVER1Q8IY67 606 aaKnown RBP14.36□□□□□ -0.11
SKA2-205ENST00000580541 PDIK1LQ8N165 341 aa14.36□□□□□ -0.11
SKA2-205ENST00000580541 SLC25A41Q8N5S1 370 aa14.36□□□□□ -0.11
SKA2-205ENST00000580541 MDGA1Q8NFP4 955 aa14.36□□□□□ -0.11
SKA2-205ENST00000580541 RUBCNQ92622 972 aa14.36□□□□□ -0.11
SKA2-205ENST00000580541 ARRDC3Q96B67 414 aa14.36□□□□□ -0.11
SKA2-205ENST00000580541 TRIB3Q96RU7 358 aa14.36□□□□□ -0.11
SKA2-205ENST00000580541 PRRX2Q99811 253 aa14.36□□□□□ -0.11
SKA2-205ENST00000580541 FOXP3Q9BZS1 431 aa14.36□□□□□ -0.11
SKA2-205ENST00000580541 NEUROG2Q9H2A3 272 aa14.36□□□□□ -0.11
SKA2-205ENST00000580541 EPB41L5Q9HCM4 733 aa14.36□□□□□ -0.11
SKA2-205ENST00000580541 PRMT8Q9NR22 394 aaPredicted RBP14.36□□□□□ -0.11
SKA2-205ENST00000580541 USP36Q9P275 1121 aaKnown RBP14.36□□□□□ -0.11
SKA2-205ENST00000580541 C2orf81A6NN90 581 aa14.35□□□□□ -0.11
SKA2-205ENST00000580541 H0Y858 1186 aa14.35□□□□□ -0.11
SKA2-205ENST00000580541 K7ESF4 209 aa14.35□□□□□ -0.11
SKA2-205ENST00000580541 RIOK3O14730 519 aaKnown RBP14.35□□□□□ -0.11
SKA2-205ENST00000580541 NDUFS2O75306 463 aa14.35□□□□□ -0.11
SKA2-205ENST00000580541 CRTAMO95727 393 aa14.35□□□□□ -0.11
SKA2-205ENST00000580541 ZNF30P17039 623 aa14.35□□□□□ -0.11
SKA2-205ENST00000580541 IVDP26440 423 aa14.35□□□□□ -0.11
SKA2-205ENST00000580541 RPL21P46778 160 aaKnown RBP14.35□□□□□ -0.11
SKA2-205ENST00000580541 ITGA8P53708 1063 aa14.35□□□□□ -0.11
SKA2-205ENST00000580541 CSTF1Q05048 431 aaKnown RBP14.35□□□□□ -0.11
SKA2-205ENST00000580541 SPARCL1Q14515 664 aa14.35□□□□□ -0.11
SKA2-205ENST00000580541 QPCTQ16769 361 aa14.35□□□□□ -0.11
SKA2-205ENST00000580541 ZNF528Q3MIS6 628 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms