RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 SERPINH1P50454 418 aaKnown RBP3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 NDST2P52849 883 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 METAP1P53582 386 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 CDH6P55285 790 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 YBEYP58557 167 aaPredicted RBP3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 TPI1P60174 286 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 MRPS21P82921 87 aaKnown RBP3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 AMPD2Q01433 879 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 SATB1Q01826 763 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 ID3Q02535 119 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 DMWDQ09019 674 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 GALNT2Q10471 571 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 KIF5AQ12840 1032 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 TCF15Q12870 199 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 CAMK2GQ13555 558 aaPredicted RBP3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 SLC12A1Q13621 1099 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 DMC1Q14565 340 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 PDK2Q15119 407 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 PRKD1Q15139 912 aaPredicted RBP3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 CYTH1Q15438 398 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 CRY1Q16526 586 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 PPP2R5EQ16537 467 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 ARL13BQ3SXY8 428 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 FBXO43Q4G163 708 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 PPP6R3Q5H9R7 873 aaPredicted RBP3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 RABGAP1LQ5R372 815 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 FAM182AQ5T1J6 154 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 RNF219Q5W0B1 726 aaPredicted RBP3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 ALG1LQ6GMV1 187 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 NPNTQ6UXI9 565 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 BBS12Q6ZW61 710 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 SND1Q7KZF4 910 aaKnown RBP eCLIP3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 SYT13Q7L8C5 426 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 DAAM2Q86T65 1068 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 KIAA1328Q86T90 577 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 KLHDC8BQ8IXV7 354 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 PGBD5Q8N414 524 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 CARNMT1Q8N4J0 409 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 SPEM1Q8N4L4 309 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 SH2D3CQ8N5H7 860 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 TEX26Q8N6G2 289 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 ALLCQ8N6M5 410 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 CNTD1Q8N815 330 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 KDM1BQ8NB78 822 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 PRSS33Q8NF86 280 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 EXD1Q8NHP7 514 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 RPLP0P6Q8NHW5 317 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 CYB5D2Q8WUJ1 264 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 MAML1Q92585 1016 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 HSPH1Q92598 858 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 PTPRN2Q92932 1015 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 RNF34Q969K3 372 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 TADA1Q96BN2 335 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 SHDQ96IW2 340 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 CALR3Q96L12 384 aaKnown RBP3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 TSGA13Q96PP4 275 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 XPO6Q96QU8 1125 aaKnown RBP3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 WDR24Q96S15 920 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 FAM129BQ96TA1 746 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 NELL2Q99435 816 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 DDX50Q9BQ39 737 aaKnown RBP3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 GORASP1Q9BQQ3 440 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 IER2Q9BTL4 223 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 MAGEH1Q9H213 219 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 LMAN1LQ9HAT1 526 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 CD93Q9NPY3 652 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 LZTFL1Q9NQ48 299 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 PRSS16Q9NQE7 514 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 DTLQ9NZJ0 730 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 KIAA1522Q9P206 1035 aaPredicted RBP3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 DNAI1Q9UI46 699 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 SLCO3A1Q9UIG8 710 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 FBXL21Q9UKT6 434 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 GUCA1BQ9UMX6 200 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 ERVW-1Q9UQF0 538 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 EFR3BQ9Y2G0 817 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 SIT1Q9Y3P8 196 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 STON1Q9Y6Q2 735 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 GVINP1Q7Z2Y8 2422 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 ASCC3Q8N3C0 2202 aaKnown RBP3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 ADAMTS20P59510 1910 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 FAM186AA6NE01 2351 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 CABIN1Q9Y6J0 2220 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 TSPAN11A1L157 253 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 CCDC66A2RUB6 948 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 LRRD1A4D1F6 860 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 POM121CA8CG34 1229 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 TTC34A8MYJ7 566 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 GOLGA6L6A8MZA4 724 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 MIF4GDA9UHW6 222 aaKnown RBP3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 H0Y626 953 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 KRT86O43790 486 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 SPOPO43791 374 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 RAMP2O60895 175 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 GJB3O75712 270 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 KLF8O95600 359 aaPredicted RBP3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 FSHBP01225 129 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 ASLP04424 464 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 ATP1A1P05023 1023 aaKnown RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms