RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 TRIM8Q9BZR9 551 aa11.15□□□□□ -0.62
GGA3-206ENST00000578773 SLAMF7Q9NQ25 335 aa11.15□□□□□ -0.62
GGA3-206ENST00000578773 ANLNQ9NQW6 1124 aa11.15□□□□□ -0.62
GGA3-206ENST00000578773 HESX1Q9UBX0 185 aa11.15□□□□□ -0.62
GGA3-206ENST00000578773 TBC1D30Q9Y2I9 924 aa11.15□□□□□ -0.62
GGA3-206ENST00000578773 HS3ST4Q9Y661 456 aa11.15□□□□□ -0.62
GGA3-206ENST00000578773 ZSCAN5CA6NGD5 496 aaPredicted RBP11.14□□□□□ -0.63
GGA3-206ENST00000578773 ARGFXA6NJG6 315 aa11.14□□□□□ -0.63
GGA3-206ENST00000578773 I6L893 689 aaPredicted RBP11.14□□□□□ -0.63
GGA3-206ENST00000578773 ZMPSTE24O75844 475 aa11.14□□□□□ -0.63
GGA3-206ENST00000578773 ADCY5O95622 1261 aa11.14□□□□□ -0.63
GGA3-206ENST00000578773 CD160O95971 181 aa11.14□□□□□ -0.63
GGA3-206ENST00000578773 NR3C1P04150 777 aa11.14□□□□□ -0.63
GGA3-206ENST00000578773 UGT2B4P06133 528 aa11.14□□□□□ -0.63
GGA3-206ENST00000578773 RHOCP08134 193 aa11.14□□□□□ -0.63
GGA3-206ENST00000578773 AK4P27144 223 aaPredicted RBP11.14□□□□□ -0.63
GGA3-206ENST00000578773 ARF5P84085 180 aa11.14□□□□□ -0.63
GGA3-206ENST00000578773 DNM1Q05193 864 aaKnown RBP11.14□□□□□ -0.63
GGA3-206ENST00000578773 CDK18Q07002 472 aa11.14□□□□□ -0.63
GGA3-206ENST00000578773 TAF5Q15542 800 aa11.14□□□□□ -0.63
GGA3-206ENST00000578773 CARD16Q5EG05 197 aa11.14□□□□□ -0.63
GGA3-206ENST00000578773 TTC39BQ5VTQ0 682 aaPredicted RBP11.14□□□□□ -0.63
GGA3-206ENST00000578773 ZNF295-AS1Q8N0V1 137 aa11.14□□□□□ -0.63
GGA3-206ENST00000578773 ATP6V0D2Q8N8Y2 350 aa11.14□□□□□ -0.63
GGA3-206ENST00000578773 NETO2Q8NC67 525 aa11.14□□□□□ -0.63
GGA3-206ENST00000578773 KIAA0895Q8NCT3 520 aa11.14□□□□□ -0.63
GGA3-206ENST00000578773 ZDHHC1Q8WTX9 485 aa11.14□□□□□ -0.63
GGA3-206ENST00000578773 KLHL32Q96NJ5 620 aa11.14□□□□□ -0.63
GGA3-206ENST00000578773 TNMDQ9H2S6 317 aa11.14□□□□□ -0.63
GGA3-206ENST00000578773 KCTD10Q9H3F6 313 aa11.14□□□□□ -0.63
GGA3-206ENST00000578773 PCDHB3Q9Y5E6 796 aa11.14□□□□□ -0.63
GGA3-206ENST00000578773 CACNA1CQ13936 2221 aa11.13□□□□□ -0.63
GGA3-206ENST00000578773 MN1Q10571 1320 aaPredicted RBP11.13□□□□□ -0.63
GGA3-206ENST00000578773 PIPSLA2A3N6 862 aa11.13□□□□□ -0.63
GGA3-206ENST00000578773 M0QYV0 167 aa11.13□□□□□ -0.63
GGA3-206ENST00000578773 IKBKBO14920 756 aa11.13□□□□□ -0.63
GGA3-206ENST00000578773 CREG1O75629 220 aa11.13□□□□□ -0.63
GGA3-206ENST00000578773 BMP15O95972 392 aa11.13□□□□□ -0.63
GGA3-206ENST00000578773 FUCA1P04066 466 aa11.13□□□□□ -0.63
GGA3-206ENST00000578773 TIMP2P16035 220 aa11.13□□□□□ -0.63
GGA3-206ENST00000578773 BRD2P25440 801 aaKnown RBP11.13□□□□□ -0.63
GGA3-206ENST00000578773 NFKBIAP25963 317 aa11.13□□□□□ -0.63
GGA3-206ENST00000578773 TXLNAP40222 546 aa11.13□□□□□ -0.63
GGA3-206ENST00000578773 NASPP49321 788 aaPredicted RBP11.13□□□□□ -0.63
GGA3-206ENST00000578773 PEX5P50542 639 aa11.13□□□□□ -0.63
GGA3-206ENST00000578773 KRT83P78385 493 aa11.13□□□□□ -0.63
GGA3-206ENST00000578773 IL10RAQ13651 578 aa11.13□□□□□ -0.63
GGA3-206ENST00000578773 PLEKHN1Q494U1 663 aaPredicted RBP11.13□□□□□ -0.63
GGA3-206ENST00000578773 MIIPQ5JXC2 388 aa11.13□□□□□ -0.63
GGA3-206ENST00000578773 PAPD7Q5XG87 772 aaKnown RBP11.13□□□□□ -0.63
GGA3-206ENST00000578773 CEACAM20Q6UY09 585 aa11.13□□□□□ -0.63
GGA3-206ENST00000578773 LEKR1Q6ZMV7 388 aa11.13□□□□□ -0.63
GGA3-206ENST00000578773 TFAP2DQ7Z6R9 452 aa11.13□□□□□ -0.63
GGA3-206ENST00000578773 SLC9A9Q8IVB4 645 aa11.13□□□□□ -0.63
GGA3-206ENST00000578773 ESX1Q8N693 406 aa11.13□□□□□ -0.63
GGA3-206ENST00000578773 UBR7Q8N806 425 aa11.13□□□□□ -0.63
GGA3-206ENST00000578773 DCAF4L2Q8NA75 395 aa11.13□□□□□ -0.63
GGA3-206ENST00000578773 INPP5DQ92835 1189 aa11.13□□□□□ -0.63
GGA3-206ENST00000578773 ZSCAN31Q96LW9 406 aaPredicted RBP11.13□□□□□ -0.63
GGA3-206ENST00000578773 TEFMQ96QE5 360 aaKnown RBP11.13□□□□□ -0.63
GGA3-206ENST00000578773 NUDT9Q9BW91 350 aa11.13□□□□□ -0.63
GGA3-206ENST00000578773 LGR4Q9BXB1 951 aa11.13□□□□□ -0.63
GGA3-206ENST00000578773 HECAQ9UBI9 543 aaPredicted RBP11.13□□□□□ -0.63
GGA3-206ENST00000578773 DGKBQ9Y6T7 804 aa11.13□□□□□ -0.63
GGA3-206ENST00000578773 VPS13CQ709C8 3753 aa11.13□□□□□ -0.63
GGA3-206ENST00000578773 RNF225M0QZC1 329 aaPredicted RBP11.12□□□□□ -0.63
GGA3-206ENST00000578773 PRICKLE3O43900 615 aaPredicted RBP11.12□□□□□ -0.63
GGA3-206ENST00000578773 SERPINH1P50454 418 aaKnown RBP11.12□□□□□ -0.63
GGA3-206ENST00000578773 CLCN6P51797 869 aa11.12□□□□□ -0.63
GGA3-206ENST00000578773 ITGA1P56199 1179 aa11.12□□□□□ -0.63
GGA3-206ENST00000578773 RNASE9P60153 205 aaKnown RBP11.12□□□□□ -0.63
GGA3-206ENST00000578773 LRRC14Q15048 493 aa11.12□□□□□ -0.63
GGA3-206ENST00000578773 ZNF805Q5CZA5 627 aa11.12□□□□□ -0.63
GGA3-206ENST00000578773 ATXN7L2Q5T6C5 722 aaPredicted RBP11.12□□□□□ -0.63
GGA3-206ENST00000578773 LCLAT1Q6UWP7 414 aa11.12□□□□□ -0.63
GGA3-206ENST00000578773 UNC13DQ70J99 1090 aa11.12□□□□□ -0.63
GGA3-206ENST00000578773 ARHGAP22Q7Z5H3 698 aa11.12□□□□□ -0.63
GGA3-206ENST00000578773 ZSCAN30Q86W11 494 aa11.12□□□□□ -0.63
GGA3-206ENST00000578773 GRAMD1CQ8IYS0 662 aa11.12□□□□□ -0.63
GGA3-206ENST00000578773 ZNF683Q8IZ20 524 aa11.12□□□□□ -0.63
GGA3-206ENST00000578773 NAGSQ8N159 534 aa11.12□□□□□ -0.63
GGA3-206ENST00000578773 RYBPQ8N488 228 aaPredicted RBP11.12□□□□□ -0.63
GGA3-206ENST00000578773 CXorf40AQ8TE69 158 aa11.12□□□□□ -0.63
GGA3-206ENST00000578773 CT55Q8WUE5 264 aa11.12□□□□□ -0.63
GGA3-206ENST00000578773 DHX58Q96C10 678 aa11.12□□□□□ -0.63
GGA3-206ENST00000578773 C2orf49Q9BVC5 232 aaPredicted RBP11.12□□□□□ -0.63
GGA3-206ENST00000578773 REPIN1Q9BWE0 567 aaKnown RBP11.12□□□□□ -0.63
GGA3-206ENST00000578773 AKIRIN1Q9H9L7 192 aaPredicted RBP11.12□□□□□ -0.63
GGA3-206ENST00000578773 MPP6Q9NZW5 540 aa11.12□□□□□ -0.63
GGA3-206ENST00000578773 CGNQ9P2M7 1197 aaKnown RBP11.12□□□□□ -0.63
GGA3-206ENST00000578773 PCDHGA9Q9Y5G4 932 aaKnown RBP11.12□□□□□ -0.63
GGA3-206ENST00000578773 KRIT1O00522 736 aa11.11□□□□□ -0.63
GGA3-206ENST00000578773 VDRP11473 427 aa11.11□□□□□ -0.63
GGA3-206ENST00000578773 HTR1BP28222 390 aa11.11□□□□□ -0.63
GGA3-206ENST00000578773 CLCN1P35523 988 aa11.11□□□□□ -0.63
GGA3-206ENST00000578773 STK4Q13043 487 aa11.11□□□□□ -0.63
GGA3-206ENST00000578773 DNASE1L3Q13609 305 aa11.11□□□□□ -0.63
GGA3-206ENST00000578773 CUL4BQ13620 913 aa11.11□□□□□ -0.63
GGA3-206ENST00000578773 RAPSNQ13702 412 aa11.11□□□□□ -0.63
GGA3-206ENST00000578773 TMEM71Q6P5X7 295 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms