RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 BMFQ96LC9 184 aa19.47■□□□□ 0.71
SS18-208ENST00000577751 FZD3Q9NPG1 666 aa19.47■□□□□ 0.71
SS18-208ENST00000577751 SAE1Q9UBE0 346 aaPredicted RBP19.47■□□□□ 0.71
SS18-208ENST00000577751 AMFRQ9UKV5 643 aa19.47■□□□□ 0.71
SS18-208ENST00000577751 CA5BQ9Y2D0 317 aa19.47■□□□□ 0.71
SS18-208ENST00000577751 EFR3BQ9Y2G0 817 aa19.47■□□□□ 0.71
SS18-208ENST00000577751 CAPN6Q9Y6Q1 641 aa19.47■□□□□ 0.71
SS18-208ENST00000577751 CFAP69A5D8W1 941 aa19.46■□□□□ 0.71
SS18-208ENST00000577751 KCNK1O00180 336 aa19.46■□□□□ 0.71
SS18-208ENST00000577751 KCNK3O14649 394 aa19.46■□□□□ 0.71
SS18-208ENST00000577751 RAD51BO15315 384 aa19.46■□□□□ 0.71
SS18-208ENST00000577751 MMP20O60882 483 aa19.46■□□□□ 0.71
SS18-208ENST00000577751 HLA-DQB2P05538 268 aa19.46■□□□□ 0.71
SS18-208ENST00000577751 CD59P13987 128 aa19.46■□□□□ 0.71
SS18-208ENST00000577751 PECAM1P16284 738 aaPredicted RBP19.46■□□□□ 0.71
SS18-208ENST00000577751 PTPN7P35236 360 aa19.46■□□□□ 0.71
SS18-208ENST00000577751 MMP12P39900 470 aa19.46■□□□□ 0.71
SS18-208ENST00000577751 RWDD2BP57060 319 aa19.46■□□□□ 0.71
SS18-208ENST00000577751 NXPH1P58417 271 aa19.46■□□□□ 0.71
SS18-208ENST00000577751 AP1B1Q10567 949 aa19.46■□□□□ 0.71
SS18-208ENST00000577751 SGCGQ13326 291 aa19.46■□□□□ 0.71
SS18-208ENST00000577751 ERAP2Q6P179 960 aa19.46■□□□□ 0.71
SS18-208ENST00000577751 DBX2Q6ZNG2 339 aa19.46■□□□□ 0.71
SS18-208ENST00000577751 GCNT7Q6ZNI0 430 aa19.46■□□□□ 0.71
SS18-208ENST00000577751 BBS12Q6ZW61 710 aa19.46■□□□□ 0.71
SS18-208ENST00000577751 DGLUCYQ7Z3D6 616 aa19.46■□□□□ 0.71
SS18-208ENST00000577751 PEX26Q7Z412 305 aa19.46■□□□□ 0.71
SS18-208ENST00000577751 SPATS2Q86XZ4 545 aaKnown RBP19.46■□□□□ 0.71
SS18-208ENST00000577751 CCDC50Q8IVM0 306 aa19.46■□□□□ 0.71
SS18-208ENST00000577751 FAM174AQ8TBP5 190 aa19.46■□□□□ 0.71
SS18-208ENST00000577751 CXorf40AQ8TE69 158 aa19.46■□□□□ 0.71
SS18-208ENST00000577751 ALG3Q92685 438 aa19.46■□□□□ 0.71
SS18-208ENST00000577751 MYOCQ99972 504 aa19.46■□□□□ 0.71
SS18-208ENST00000577751 TSGA10Q9BZW7 698 aa19.46■□□□□ 0.71
SS18-208ENST00000577751 HAUS2Q9NVX0 235 aa19.46■□□□□ 0.71
SS18-208ENST00000577751 FNDC3AQ9Y2H6 1198 aaKnown RBP19.46■□□□□ 0.71
SS18-208ENST00000577751 H0Y8X5 98 aa19.45■□□□□ 0.7
SS18-208ENST00000577751 KRT86O43790 486 aa19.45■□□□□ 0.7
SS18-208ENST00000577751 FZD6O60353 706 aa19.45■□□□□ 0.7
SS18-208ENST00000577751 DFNA5O60443 496 aa19.45■□□□□ 0.7
SS18-208ENST00000577751 MAGEC1O60732 1142 aa19.45■□□□□ 0.7
SS18-208ENST00000577751 TM7SF2O76062 418 aa19.45■□□□□ 0.7
SS18-208ENST00000577751 JCHAINP01591 159 aa19.45■□□□□ 0.7
SS18-208ENST00000577751 CSRP1P21291 193 aaKnown RBP19.45■□□□□ 0.7
SS18-208ENST00000577751 ITKQ08881 620 aa19.45■□□□□ 0.7
SS18-208ENST00000577751 ZBTB17Q13105 803 aa19.45■□□□□ 0.7
SS18-208ENST00000577751 AGERQ15109 404 aa19.45■□□□□ 0.7
SS18-208ENST00000577751 PRKD1Q15139 912 aaPredicted RBP19.45■□□□□ 0.7
SS18-208ENST00000577751 PIP4P1Q86T03 277 aa19.45■□□□□ 0.7
SS18-208ENST00000577751 DENND6BQ8NEG7 585 aa19.45■□□□□ 0.7
SS18-208ENST00000577751 P3H4Q92791 437 aa19.45■□□□□ 0.7
SS18-208ENST00000577751 CENPTQ96BT3 561 aa19.45■□□□□ 0.7
SS18-208ENST00000577751 KLHDC7BQ96G42 594 aa19.45■□□□□ 0.7
SS18-208ENST00000577751 HERPUD2Q9BSE4 406 aa19.45■□□□□ 0.7
SS18-208ENST00000577751 WRAP53Q9BUR4 548 aaKnown RBP19.45■□□□□ 0.7
SS18-208ENST00000577751 ERVMER34-1Q9H9K5 563 aa19.45■□□□□ 0.7
SS18-208ENST00000577751 GDF3Q9NR23 364 aa19.45■□□□□ 0.7
SS18-208ENST00000577751 TM7SF3Q9NS93 570 aa19.45■□□□□ 0.7
SS18-208ENST00000577751 PCDHB9Q9Y5E1 797 aa19.45■□□□□ 0.7
SS18-208ENST00000577751 PCDHGB2Q9Y5G2 931 aa19.45■□□□□ 0.7
SS18-208ENST00000577751 POM121BA6NF01 834 aa19.44■□□□□ 0.7
SS18-208ENST00000577751 MIF4GDA9UHW6 222 aaKnown RBP19.44■□□□□ 0.7
SS18-208ENST00000577751 PGLSO95336 258 aa19.44■□□□□ 0.7
SS18-208ENST00000577751 PRKCGP05129 697 aa19.44■□□□□ 0.7
SS18-208ENST00000577751 PYGMP11217 842 aa19.44■□□□□ 0.7
SS18-208ENST00000577751 CLDN2P57739 230 aa19.44■□□□□ 0.7
SS18-208ENST00000577751 DSC2Q02487 901 aa19.44■□□□□ 0.7
SS18-208ENST00000577751 NIPAL4Q0D2K0 466 aa19.44■□□□□ 0.7
SS18-208ENST00000577751 RALGDSQ12967 914 aa19.44■□□□□ 0.7
SS18-208ENST00000577751 PIH1D2Q8WWB5 315 aa19.44■□□□□ 0.7
SS18-208ENST00000577751 HES6Q96HZ4 224 aa19.44■□□□□ 0.7
SS18-208ENST00000577751 ELF4Q99607 663 aaPredicted RBP19.44■□□□□ 0.7
SS18-208ENST00000577751 HEMGNQ9BXL5 484 aa19.44■□□□□ 0.7
SS18-208ENST00000577751 OSBPL8Q9BZF1 889 aa19.44■□□□□ 0.7
SS18-208ENST00000577751 GPR27Q9NS67 375 aa19.44■□□□□ 0.7
SS18-208ENST00000577751 PHTF1Q9UMS5 762 aa19.44■□□□□ 0.7
SS18-208ENST00000577751 PPIL1Q9Y3C6 166 aa19.44■□□□□ 0.7
SS18-208ENST00000577751 RAI2Q9Y5P3 530 aa19.44■□□□□ 0.7
SS18-208ENST00000577751 A0A1B0GTQ1 180 aa19.43■□□□□ 0.7
SS18-208ENST00000577751 APOC4-APOC2K7ER74 178 aa19.43■□□□□ 0.7
SS18-208ENST00000577751 DDX3YO15523 660 aaKnown RBP19.43■□□□□ 0.7
SS18-208ENST00000577751 NEBLO76041 1014 aa19.43■□□□□ 0.7
SS18-208ENST00000577751 FTCDO95954 541 aa19.43■□□□□ 0.7
SS18-208ENST00000577751 CPP00450 1065 aa19.43■□□□□ 0.7
SS18-208ENST00000577751 APOC2P02655 101 aa19.43■□□□□ 0.7
SS18-208ENST00000577751 MMP2P08253 660 aa19.43■□□□□ 0.7
SS18-208ENST00000577751 CCDC175P0C221 793 aa19.43■□□□□ 0.7
SS18-208ENST00000577751 THEGLP0DJG4 465 aa19.43■□□□□ 0.7
SS18-208ENST00000577751 C6P13671 934 aa19.43■□□□□ 0.7
SS18-208ENST00000577751 LIG3P49916 1009 aa19.43■□□□□ 0.7
SS18-208ENST00000577751 FAM193AP78312 1265 aa19.43■□□□□ 0.7
SS18-208ENST00000577751 SEMG2Q02383 582 aa19.43■□□□□ 0.7
SS18-208ENST00000577751 SHBQ15464 509 aa19.43■□□□□ 0.7
SS18-208ENST00000577751 ARMC12Q5T9G4 340 aa19.43■□□□□ 0.7
SS18-208ENST00000577751 KYAT3Q6YP21 454 aaKnown RBP19.43■□□□□ 0.7
SS18-208ENST00000577751 B4GALNT4Q76KP1 1039 aa19.43■□□□□ 0.7
SS18-208ENST00000577751 DPPA4Q7L190 304 aa19.43■□□□□ 0.7
SS18-208ENST00000577751 ERMP1Q7Z2K6 904 aa19.43■□□□□ 0.7
SS18-208ENST00000577751 TP53I13Q8NBR0 393 aaPredicted RBP19.43■□□□□ 0.7
SS18-208ENST00000577751 OR13H1Q8NG92 308 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms