RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 KIAA2013Q8IYS2 634 aa2.63□□□□□ -1.99
COPS3-213ENST00000577210 FAM9BQ8IZU0 186 aa2.63□□□□□ -1.99
COPS3-213ENST00000577210 TMTC2Q8N394 836 aa2.63□□□□□ -1.99
COPS3-213ENST00000577210 NGEFQ8N5V2 710 aa2.63□□□□□ -1.99
COPS3-213ENST00000577210 C1orf131Q8NDD1 294 aaKnown RBP2.63□□□□□ -1.99
COPS3-213ENST00000577210 GJC3Q8NFK1 279 aa2.63□□□□□ -1.99
COPS3-213ENST00000577210 CADM4Q8NFZ8 388 aa2.63□□□□□ -1.99
COPS3-213ENST00000577210 SNAPC3Q92966 411 aa2.63□□□□□ -1.99
COPS3-213ENST00000577210 ARHGEF2Q92974 986 aaKnown RBP2.63□□□□□ -1.99
COPS3-213ENST00000577210 METTL2AQ96IZ6 378 aaKnown RBP2.63□□□□□ -1.99
COPS3-213ENST00000577210 LRFN5Q96NI6 719 aa2.63□□□□□ -1.99
COPS3-213ENST00000577210 BARD1Q99728 777 aaKnown RBP2.63□□□□□ -1.99
COPS3-213ENST00000577210 MXRA8Q9BRK3 442 aa2.63□□□□□ -1.99
COPS3-213ENST00000577210 NTPCRQ9BSD7 190 aaKnown RBP2.63□□□□□ -1.99
COPS3-213ENST00000577210 STRA6Q9BX79 667 aa2.63□□□□□ -1.99
COPS3-213ENST00000577210 IFIH1Q9BYX4 1025 aaKnown RBP2.63□□□□□ -1.99
COPS3-213ENST00000577210 SLC25A18Q9H1K4 315 aa2.63□□□□□ -1.99
COPS3-213ENST00000577210 SYNCQ9H7C4 482 aa2.63□□□□□ -1.99
COPS3-213ENST00000577210 MVB12BQ9H7P6 319 aa2.63□□□□□ -1.99
COPS3-213ENST00000577210 PLAC1Q9HBJ0 212 aa2.63□□□□□ -1.99
COPS3-213ENST00000577210 UBA2Q9UBT2 640 aaPredicted RBP2.63□□□□□ -1.99
COPS3-213ENST00000577210 LIMA1Q9UHB6 759 aaKnown RBP2.63□□□□□ -1.99
COPS3-213ENST00000577210 ERVK-11Q9UQG0 969 aa2.63□□□□□ -1.99
COPS3-213ENST00000577210 CAMK2AQ9UQM7 478 aa2.63□□□□□ -1.99
COPS3-213ENST00000577210 MTMR6Q9Y217 621 aa2.63□□□□□ -1.99
COPS3-213ENST00000577210 SLC45A1Q9Y2W3 748 aa2.63□□□□□ -1.99
COPS3-213ENST00000577210 ZNF644Q9H582 1327 aaPredicted RBP2.63□□□□□ -1.99
COPS3-213ENST00000577210 A0A0A0MQY5 61 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 A0A1B0GVM2 712 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 A0A1W2PQM1 296 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 PGPEP1LA6NFU8 196 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 KDM4EB2RXH2 506 aaPredicted RBP2.62□□□□□ -1.99
COPS3-213ENST00000577210 KLRF2D3W0D1 207 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 GTPBP1O00178 669 aaKnown RBP2.62□□□□□ -1.99
COPS3-213ENST00000577210 BCAT2O15382 392 aaPredicted RBP2.62□□□□□ -1.99
COPS3-213ENST00000577210 LIASO43766 372 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 HNRNPCL1O60812 293 aaKnown RBP2.62□□□□□ -1.99
COPS3-213ENST00000577210 ATP2C2O75185 946 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 DAB1O75553 588 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 TIPRLO75663 272 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 SLC25A12O75746 678 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 RNASEH2AO75792 299 aaKnown RBP2.62□□□□□ -1.99
COPS3-213ENST00000577210 SERPINI2O75830 405 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 GFPT2O94808 682 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 SOX30O94993 753 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 CLDN7O95471 211 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 GLUD1P00367 558 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 IGKV2-30P06310 120 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 PRSS2P07478 247 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 MMP2P08253 660 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 CBSLP0DN79 551 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 ACTN1P12814 892 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 LAMP2P13473 410 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 KRT10P13645 584 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 ETFAP13804 333 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 ZNF182P17025 639 aaPredicted RBP2.62□□□□□ -1.99
COPS3-213ENST00000577210 SRD5A1P18405 259 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 DCTDP32321 178 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 CBSP35520 551 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 MLH1P40692 756 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 PPP3CCP48454 512 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 GLUD2P49448 558 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 HARS2P49590 506 aaKnown RBP2.62□□□□□ -1.99
COPS3-213ENST00000577210 PEX5P50542 639 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 P2RX3P56373 397 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 SELENOVP59797 346 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 EGR4Q05215 589 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 PPATQ06203 517 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 CSTF3Q12996 717 aaKnown RBP2.62□□□□□ -1.99
COPS3-213ENST00000577210 AIMP2Q13155 320 aaKnown RBP2.62□□□□□ -1.99
COPS3-213ENST00000577210 DCTN2Q13561 401 aaKnown RBP2.62□□□□□ -1.99
COPS3-213ENST00000577210 DRAP1Q14919 205 aaPredicted RBP2.62□□□□□ -1.99
COPS3-213ENST00000577210 ADIPOQQ15848 244 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 HLFQ16534 295 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 TSTQ16762 297 aaKnown RBP2.62□□□□□ -1.99
COPS3-213ENST00000577210 FBXO43Q4G163 708 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 SLC45A4Q5BKX6 768 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 FNBP1LQ5T0N5 605 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 HAUS3Q68CZ6 603 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 PLEKHA7Q6IQ23 1121 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 CES5AQ6NT32 575 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 C8orf82Q6P1X6 216 aaPredicted RBP2.62□□□□□ -1.99
COPS3-213ENST00000577210 TMEM71Q6P5X7 295 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 NCEH1Q6PIU2 408 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 C1orf122Q6ZSJ8 110 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 Q6ZTK2 550 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 MOB3CQ70IA8 216 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 BRINP3Q76B58 766 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 TRIM74Q86UV6 250 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 TRIM73Q86UV7 250 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 PLD5Q8N7P1 536 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 FRMD1Q8N878 549 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 ZNF548Q8NEK5 533 aaPredicted RBP2.62□□□□□ -1.99
COPS3-213ENST00000577210 AGBL3Q8NEM8 1001 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 ENGASEQ8NFI3 743 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 FAM216AQ8WUB2 273 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 IGFBPL1Q8WX77 278 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 TRIB2Q92519 343 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 GTF3C6Q969F1 213 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 INTS12Q96CB8 462 aaKnown RBP2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms