RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 GRK6P43250 576 aa6.38□□□□□ -1.39
NUP88-212ENST00000576708 MTIF2P46199 727 aaKnown RBP6.38□□□□□ -1.39
NUP88-212ENST00000576708 CCR5P51681 352 aa6.38□□□□□ -1.39
NUP88-212ENST00000576708 PLK1P53350 603 aa6.38□□□□□ -1.39
NUP88-212ENST00000576708 CYP4F3Q08477 520 aa6.38□□□□□ -1.39
NUP88-212ENST00000576708 CNTN1Q12860 1018 aa6.38□□□□□ -1.39
NUP88-212ENST00000576708 DNAJC3Q13217 504 aa6.38□□□□□ -1.39
NUP88-212ENST00000576708 IKZF1Q13422 519 aa6.38□□□□□ -1.39
NUP88-212ENST00000576708 DLG2Q15700 870 aa6.38□□□□□ -1.39
NUP88-212ENST00000576708 COL28A1Q2UY09 1125 aa6.38□□□□□ -1.39
NUP88-212ENST00000576708 ACCSLQ4AC99 568 aa6.38□□□□□ -1.39
NUP88-212ENST00000576708 ALFQ53S48 1182 aa6.38□□□□□ -1.39
NUP88-212ENST00000576708 C2CD6Q53TS8 623 aa6.38□□□□□ -1.39
NUP88-212ENST00000576708 ARTNQ5T4W7 220 aa6.38□□□□□ -1.39
NUP88-212ENST00000576708 TBC1D3GQ6DHY5 549 aa6.38□□□□□ -1.39
NUP88-212ENST00000576708 TBC1D3CQ6IPX1 549 aa6.38□□□□□ -1.39
NUP88-212ENST00000576708 DPY19L2P1Q6NXN4 242 aa6.38□□□□□ -1.39
NUP88-212ENST00000576708 OLFML1Q6UWY5 402 aa6.38□□□□□ -1.39
NUP88-212ENST00000576708 C11orf57Q6ZUT1 292 aaPredicted RBP6.38□□□□□ -1.39
NUP88-212ENST00000576708 ENOSF1Q7L5Y1 443 aa6.38□□□□□ -1.39
NUP88-212ENST00000576708 SPATS2Q86XZ4 545 aaKnown RBP6.38□□□□□ -1.39
NUP88-212ENST00000576708 WFDC3Q8IUB2 231 aa6.38□□□□□ -1.39
NUP88-212ENST00000576708 TBC1D3Q8IZP1 549 aaPredicted RBP6.38□□□□□ -1.39
NUP88-212ENST00000576708 EID2Q8N6I1 236 aa6.38□□□□□ -1.39
NUP88-212ENST00000576708 KDM1BQ8NB78 822 aa6.38□□□□□ -1.39
NUP88-212ENST00000576708 KLK6Q92876 244 aa6.38□□□□□ -1.39
NUP88-212ENST00000576708 SERAC1Q96JX3 654 aa6.38□□□□□ -1.39
NUP88-212ENST00000576708 RPRD1AQ96P16 312 aaPredicted RBP6.38□□□□□ -1.39
NUP88-212ENST00000576708 ELF4Q99607 663 aaPredicted RBP6.38□□□□□ -1.39
NUP88-212ENST00000576708 MYOCQ99972 504 aa6.38□□□□□ -1.39
NUP88-212ENST00000576708 FEM1AQ9BSK4 669 aa6.38□□□□□ -1.39
NUP88-212ENST00000576708 PIGVQ9NUD9 493 aa6.38□□□□□ -1.39
NUP88-212ENST00000576708 GPATCH2Q9NW75 528 aa6.38□□□□□ -1.39
NUP88-212ENST00000576708 APEX2Q9UBZ4 518 aa6.38□□□□□ -1.39
NUP88-212ENST00000576708 SLC12A6Q9UHW9 1150 aa6.38□□□□□ -1.39
NUP88-212ENST00000576708 FZD4Q9ULV1 537 aa6.38□□□□□ -1.39
NUP88-212ENST00000576708 SCML1Q9UN30 329 aa6.38□□□□□ -1.39
NUP88-212ENST00000576708 OR51B4Q9Y5P0 310 aa6.38□□□□□ -1.39
NUP88-212ENST00000576708 PTPRBP23467 1997 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.37□□□□□ -1.39
NUP88-212ENST00000576708 A0A1B0GVM2 712 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 TCAF2A6NFQ2 919 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 CBFA2T2O43439 604 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 SMAD6O43541 496 aaKnown RBP6.37□□□□□ -1.39
NUP88-212ENST00000576708 PCDHGA12O60330 932 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 HSF2BPO75031 334 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 SDC3O75056 442 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 DAB1O75553 588 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 ENDOD1O94919 500 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 FGFR1OPO95684 399 aaKnown RBP6.37□□□□□ -1.39
NUP88-212ENST00000576708 WNT11O96014 354 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 PRNPP04156 253 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 ITGAVP06756 1048 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 CTSLP07711 333 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 GLI1P08151 1106 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 ZNF18P17022 549 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 PTMSP20962 102 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 GLDCP23378 1020 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 CD38P28907 300 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 CCR1P32246 355 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 KRT9P35527 623 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 NNMTP40261 264 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 NXPH1P58417 271 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 SLC6A3Q01959 620 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 ZNF177Q13360 481 aaPredicted RBP6.37□□□□□ -1.39
NUP88-212ENST00000576708 SLC12A1Q13621 1099 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 ELAVL3Q14576 367 aaKnown RBP6.37□□□□□ -1.39
NUP88-212ENST00000576708 FXNQ16595 210 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 MEA1Q16626 185 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 EXOC3L4Q17RC7 722 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 RAB6CQ53S08 254 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 EFHC1Q5JVL4 640 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 RABGAP1LQ5R372 815 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 TAF3Q5VWG9 929 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 TRNP1Q6NT89 227 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 LINGO4Q6UY18 593 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 PHLDB2Q86SQ0 1253 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 ZNF683Q8IZ20 524 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 GPATCH11Q8N954 259 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 CHST14Q8NCH0 376 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 PIP4K2CQ8TBX8 421 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 SAP25Q8TEE9 199 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 ASB11Q8WXH4 323 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 ARRDC3Q96B67 414 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 MISP3Q96FF7 219 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 CNDP2Q96KP4 475 aaKnown RBP6.37□□□□□ -1.39
NUP88-212ENST00000576708 TBCBQ99426 244 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 PSMB7Q99436 277 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 NPY6RQ99463 290 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 TRIM62Q9BVG3 475 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 TRIM55Q9BYV6 548 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 TKTL2Q9H0I9 626 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 RAB6CQ9H0N0 254 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 TRIT1Q9H3H1 467 aaKnown RBP6.37□□□□□ -1.39
NUP88-212ENST00000576708 ZFP64Q9NPA5 681 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 PRDM7Q9NQW5 492 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 GDF3Q9NR23 364 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 ASNSD1Q9NWL6 643 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 MPP6Q9NZW5 540 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 ARHGAP20Q9P2F6 1191 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms