RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 SLC22A3O75751 556 aa13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 CTSHP09668 335 aa13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 ODC1P11926 461 aa13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 DDX5P17844 614 aaKnown RBP13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 AKAP5P24588 427 aa13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 KCNJ11Q14654 390 aa13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 SH3D19Q5HYK7 790 aa13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 GCNT7Q6ZNI0 430 aa13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 SAMD7Q7Z3H4 446 aa13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 FSTL5Q8N475 847 aaPredicted RBP13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 SCAIQ8N9R8 606 aa13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 GJD4Q96KN9 370 aaPredicted RBP13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 HIPK3Q9H422 1215 aa13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 SLC17A6Q9P2U8 582 aa13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 TIMM13Q9Y5L4 95 aaPredicted RBP13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 RIMBP3CA6NJZ7 1639 aa13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 RIMBP3BA6NNM3 1639 aa13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 RIMBP3Q9UFD9 1639 aa13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 C2CD4BA6NLJ0 364 aa13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 J3QRK9 145 aa13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 B4GALT4O60513 344 aa13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 CILPO75339 1184 aa13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 VNN1O95497 513 aa13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 USP17L7P0C7H9 530 aa13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 TRAP1Q12931 704 aaKnown RBP13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 ARHGEF7Q14155 803 aa13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 HERC3Q15034 1050 aa13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 ZNF829Q3KNS6 432 aaPredicted RBP13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 CGB2Q6NT52 195 aa13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 DCP1BQ8IZD4 617 aaKnown RBP13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 CPSF7Q8N684 471 aaKnown RBP13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 DDX1Q92499 740 aaKnown RBP13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 C12orf43Q96C57 262 aaKnown RBP13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 FBXL8Q96CD0 374 aa13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 CRNNQ9UBG3 495 aaPredicted RBP13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 A0A1B0GW55 424 aa13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 RGS14O43566 566 aa13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 DUX4L2P0CJ85 424 aa13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 DUX4L3P0CJ86 424 aa13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 DUX4L4P0CJ87 422 aa13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 DUX4L5P0CJ88 424 aa13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 DUX4L6P0CJ89 424 aa13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 DUX4L7P0CJ90 424 aa13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 GNA12Q03113 381 aa13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 XKR5Q6UX68 686 aa13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 STRADAQ7RTN6 431 aa13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 B3GALNT2Q8NCR0 500 aa13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 TLE6Q9H808 572 aa13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 CD320Q9NPF0 282 aa13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 DUX4Q9UBX2 424 aa13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 B4GALT5O43286 388 aa13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 UMPSP11172 480 aa13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 TUBA4AP68366 448 aa13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 FAM182AQ5T1J6 154 aa13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 SLC26A9Q7LBE3 791 aa13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 UNC5BQ8IZJ1 945 aa13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 ZDHHC14Q8IZN3 488 aa13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 MARVELD2Q8N4S9 558 aa13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 CANT1Q8WVQ1 401 aa13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 MUC13Q9H3R2 512 aa13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 DYRK4Q9NR20 520 aa13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 IGSF9Q9P2J2 1179 aa13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 SF3B1O75533 1304 aaKnown RBP eCLIP13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 E7ENX8 843 aa13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 AP2A1O95782 977 aa13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 MLYCDO95822 493 aa13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 GRIA1P42261 906 aa13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 MAGEA8P43361 318 aa13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 ADAM17P78536 824 aa13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 LIPEQ05469 1076 aa13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 TRIP4Q15650 581 aaPredicted RBP13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 FAM187BQ17R55 369 aa13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 MYLK3Q32MK0 819 aa13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 SLC27A1Q6PCB7 646 aa13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 KLHL17Q6TDP4 642 aa13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 IGDCC3Q8IVU1 814 aa13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 CDYL2Q8N8U2 506 aa13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 ROPN1LQ96C74 230 aa13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 KCTD15Q96SI1 283 aaPredicted RBP13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 OSMRQ99650 979 aa13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 PCDH12Q9NPG4 1184 aa13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 GNPTGQ9UJJ9 305 aa13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 GM2AP17900 193 aa13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 SLC26A3P40879 764 aa13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 FKBP1AP62942 108 aaKnown RBP13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 TRIM32Q13049 653 aa13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 TLR1Q15399 786 aa13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 RNF219Q5W0B1 726 aaPredicted RBP13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 TLK2Q86UE8 772 aa13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 NRG4Q8WWG1 115 aa13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 RPRD1BQ9NQG5 326 aaKnown RBP13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 RCOR3Q9P2K3 495 aaPredicted RBP13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 CNOT6Q9ULM6 557 aaKnown RBP13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 SNTNA6NMZ2 147 aa13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 C9JVG2 144 aa13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 BUD23O43709 281 aaKnown RBP13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 OGDHQ02218 1023 aa13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 SEMA5AQ13591 1074 aa13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 TEX44Q53QW1 395 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms