RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 PCDH8O95206 1070 aa14.07□□□□□ -0.16
RPAIN-217ENST00000575711 METTL18O95568 372 aa14.07□□□□□ -0.16
RPAIN-217ENST00000575711 PDHA1P08559 390 aa14.07□□□□□ -0.16
RPAIN-217ENST00000575711 ETS1P14921 441 aa14.07□□□□□ -0.16
RPAIN-217ENST00000575711 GRIA4P48058 902 aa14.07□□□□□ -0.16
RPAIN-217ENST00000575711 WNT3AP56704 352 aa14.07□□□□□ -0.16
RPAIN-217ENST00000575711 CDK18Q07002 472 aa14.07□□□□□ -0.16
RPAIN-217ENST00000575711 PLK5Q496M5 336 aa14.07□□□□□ -0.16
RPAIN-217ENST00000575711 SPDYCQ5MJ68 293 aa14.07□□□□□ -0.16
RPAIN-217ENST00000575711 PMS2CLQ68D20 193 aa14.07□□□□□ -0.16
RPAIN-217ENST00000575711 KIAA0895LQ68EN5 471 aa14.07□□□□□ -0.16
RPAIN-217ENST00000575711 CCDC70Q6NSX1 233 aa14.07□□□□□ -0.16
RPAIN-217ENST00000575711 NEK5Q6P3R8 708 aa14.07□□□□□ -0.16
RPAIN-217ENST00000575711 KDELC1Q6UW63 502 aa14.07□□□□□ -0.16
RPAIN-217ENST00000575711 C4orf22Q6V702 233 aa14.07□□□□□ -0.16
RPAIN-217ENST00000575711 USP45Q70EL2 814 aa14.07□□□□□ -0.16
RPAIN-217ENST00000575711 TMEFF1Q8IYR6 380 aa14.07□□□□□ -0.16
RPAIN-217ENST00000575711 DEFB119Q8N690 84 aa14.07□□□□□ -0.16
RPAIN-217ENST00000575711 LPCAT1Q8NF37 534 aa14.07□□□□□ -0.16
RPAIN-217ENST00000575711 FOXJ1Q92949 421 aa14.07□□□□□ -0.16
RPAIN-217ENST00000575711 FEM1CQ96JP0 617 aa14.07□□□□□ -0.16
RPAIN-217ENST00000575711 ZC3H10Q96K80 434 aaKnown RBP14.07□□□□□ -0.16
RPAIN-217ENST00000575711 RUNDC3BQ96NL0 473 aa14.07□□□□□ -0.16
RPAIN-217ENST00000575711 FSD1LQ9BXM9 530 aa14.07□□□□□ -0.16
RPAIN-217ENST00000575711 DDX47Q9H0S4 455 aaKnown RBP14.07□□□□□ -0.16
RPAIN-217ENST00000575711 DUSP15Q9H1R2 295 aaPredicted RBP14.07□□□□□ -0.16
RPAIN-217ENST00000575711 EPC1Q9H2F5 836 aa14.07□□□□□ -0.16
RPAIN-217ENST00000575711 C6orf106Q9H6K1 298 aaPredicted RBP14.07□□□□□ -0.16
RPAIN-217ENST00000575711 CDC23Q9UJX2 597 aa14.07□□□□□ -0.16
RPAIN-217ENST00000575711 RAB23Q9ULC3 237 aa14.07□□□□□ -0.16
RPAIN-217ENST00000575711 TPX2Q9ULW0 747 aaKnown RBP14.07□□□□□ -0.16
RPAIN-217ENST00000575711 ITM2BQ9Y287 266 aa14.07□□□□□ -0.16
RPAIN-217ENST00000575711 MEI4A8MW99 385 aa14.06□□□□□ -0.16
RPAIN-217ENST00000575711 RIOK3O14730 519 aaKnown RBP14.06□□□□□ -0.16
RPAIN-217ENST00000575711 RNGTTO60942 597 aaKnown RBP14.06□□□□□ -0.16
RPAIN-217ENST00000575711 FSBPO95073 299 aa14.06□□□□□ -0.16
RPAIN-217ENST00000575711 ECEL1O95672 775 aa14.06□□□□□ -0.16
RPAIN-217ENST00000575711 NDST3O95803 873 aa14.06□□□□□ -0.16
RPAIN-217ENST00000575711 GAS8O95995 478 aa14.06□□□□□ -0.16
RPAIN-217ENST00000575711 PRLP01236 227 aa14.06□□□□□ -0.16
RPAIN-217ENST00000575711 PRKCGP05129 697 aa14.06□□□□□ -0.16
RPAIN-217ENST00000575711 ZSCAN5DPP0CG00 497 aa14.06□□□□□ -0.16
RPAIN-217ENST00000575711 CYP2A6P11509 494 aaPredicted RBP14.06□□□□□ -0.16
RPAIN-217ENST00000575711 ITIH2P19823 946 aa14.06□□□□□ -0.16
RPAIN-217ENST00000575711 RPL22P35268 128 aaKnown RBP14.06□□□□□ -0.16
RPAIN-217ENST00000575711 FDFT1P37268 417 aa14.06□□□□□ -0.16
RPAIN-217ENST00000575711 FAM193AP78312 1265 aa14.06□□□□□ -0.16
RPAIN-217ENST00000575711 CKAP4Q07065 602 aaKnown RBP14.06□□□□□ -0.16
RPAIN-217ENST00000575711 TUBB2AQ13885 445 aa14.06□□□□□ -0.16
RPAIN-217ENST00000575711 GALNT3Q14435 633 aa14.06□□□□□ -0.16
RPAIN-217ENST00000575711 FAXCQ5TGI0 409 aa14.06□□□□□ -0.16
RPAIN-217ENST00000575711 KIAA1161Q6NSJ0 714 aa14.06□□□□□ -0.16
RPAIN-217ENST00000575711 KDELC2Q7Z4H8 507 aa14.06□□□□□ -0.16
RPAIN-217ENST00000575711 PRUNE1Q86TP1 453 aa14.06□□□□□ -0.16
RPAIN-217ENST00000575711 KLHL7Q8IXQ5 586 aa14.06□□□□□ -0.16
RPAIN-217ENST00000575711 GLIS1Q8NBF1 620 aa14.06□□□□□ -0.16
RPAIN-217ENST00000575711 CXorf40AQ8TE69 158 aa14.06□□□□□ -0.16
RPAIN-217ENST00000575711 PIH1D2Q8WWB5 315 aa14.06□□□□□ -0.16
RPAIN-217ENST00000575711 RMDN1Q96DB5 314 aa14.06□□□□□ -0.16
RPAIN-217ENST00000575711 MRGPRX2Q96LB1 330 aa14.06□□□□□ -0.16
RPAIN-217ENST00000575711 TRIB3Q96RU7 358 aa14.06□□□□□ -0.16
RPAIN-217ENST00000575711 GORASP1Q9BQQ3 440 aa14.06□□□□□ -0.16
RPAIN-217ENST00000575711 MLPHQ9BV36 600 aaPredicted RBP14.06□□□□□ -0.16
RPAIN-217ENST00000575711 TUBB2BQ9BVA1 445 aa14.06□□□□□ -0.16
RPAIN-217ENST00000575711 SEMA4AQ9H3S1 761 aa14.06□□□□□ -0.16
RPAIN-217ENST00000575711 FAM86C1Q9NVL1 165 aa14.06□□□□□ -0.16
RPAIN-217ENST00000575711 GGT7Q9UJ14 662 aa14.06□□□□□ -0.16
RPAIN-217ENST00000575711 PPIL1Q9Y3C6 166 aa14.06□□□□□ -0.16
RPAIN-217ENST00000575711 A0A0J9YYE9 177 aa14.05□□□□□ -0.16
RPAIN-217ENST00000575711 LOC285095A0A1B0GVY8 99 aa14.05□□□□□ -0.16
RPAIN-217ENST00000575711 A0A1W2PQU0 124 aa14.05□□□□□ -0.16
RPAIN-217ENST00000575711 METTL12A8MUP2 240 aa14.05□□□□□ -0.16
RPAIN-217ENST00000575711 ANKRD66B4E2M5 251 aa14.05□□□□□ -0.16
RPAIN-217ENST00000575711 E7EVH7 732 aa14.05□□□□□ -0.16
RPAIN-217ENST00000575711 PSMD3O43242 534 aa14.05□□□□□ -0.16
RPAIN-217ENST00000575711 SPINT1O43278 529 aa14.05□□□□□ -0.16
RPAIN-217ENST00000575711 EPOP01588 193 aa14.05□□□□□ -0.16
RPAIN-217ENST00000575711 TRBC1P01850 177 aa14.05□□□□□ -0.16
RPAIN-217ENST00000575711 KRT14P02533 472 aa14.05□□□□□ -0.16
RPAIN-217ENST00000575711 CTPS1P17812 591 aa14.05□□□□□ -0.16
RPAIN-217ENST00000575711 MMP12P39900 470 aa14.05□□□□□ -0.16
RPAIN-217ENST00000575711 NBL1P41271 181 aa14.05□□□□□ -0.16
RPAIN-217ENST00000575711 DHPSP49366 369 aaPredicted RBP14.05□□□□□ -0.16
RPAIN-217ENST00000575711 CCR5P51681 352 aa14.05□□□□□ -0.16
RPAIN-217ENST00000575711 PPP2CBP62714 309 aa14.05□□□□□ -0.16
RPAIN-217ENST00000575711 RPS21P63220 83 aaKnown RBP14.05□□□□□ -0.16
RPAIN-217ENST00000575711 PPP2CAP67775 309 aa14.05□□□□□ -0.16
RPAIN-217ENST00000575711 QPCTQ16769 361 aa14.05□□□□□ -0.16
RPAIN-217ENST00000575711 WHAMMP3Q1A5X7 153 aa14.05□□□□□ -0.16
RPAIN-217ENST00000575711 TMEM52BQ4KMG9 183 aa14.05□□□□□ -0.16
RPAIN-217ENST00000575711 SYCP2LQ5T4T6 812 aa14.05□□□□□ -0.16
RPAIN-217ENST00000575711 LYSMD4Q5XG99 296 aa14.05□□□□□ -0.16
RPAIN-217ENST00000575711 DPPA4Q7L190 304 aa14.05□□□□□ -0.16
RPAIN-217ENST00000575711 ARMCX6Q7L4S7 300 aa14.05□□□□□ -0.16
RPAIN-217ENST00000575711 TRIM69Q86WT6 500 aa14.05□□□□□ -0.16
RPAIN-217ENST00000575711 HORMAD1Q86X24 394 aa14.05□□□□□ -0.16
RPAIN-217ENST00000575711 PIP4P2Q8N4L2 257 aa14.05□□□□□ -0.16
RPAIN-217ENST00000575711 TAB3Q8N5C8 712 aaPredicted RBP14.05□□□□□ -0.16
RPAIN-217ENST00000575711 SPATA4Q8NEY3 305 aa14.05□□□□□ -0.16
RPAIN-217ENST00000575711 SNX19Q92543 992 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms