RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 HPCAL4Q9UM19 191 aa10.73□□□□□ -0.69
LITAF-216ENST00000574848 ZFR2Q9UPR6 939 aaKnown RBP10.73□□□□□ -0.69
LITAF-216ENST00000574848 ACTL7AQ9Y615 435 aa10.73□□□□□ -0.69
LITAF-216ENST00000574848 DOCK9Q9BZ29 2069 aa10.73□□□□□ -0.69
LITAF-216ENST00000574848 IGF2RP11717 2491 aa10.72□□□□□ -0.69
LITAF-216ENST00000574848 MAP2K7O14733 419 aa10.72□□□□□ -0.69
LITAF-216ENST00000574848 SPINT1O43278 529 aa10.72□□□□□ -0.69
LITAF-216ENST00000574848 RAD51CO43502 376 aa10.72□□□□□ -0.69
LITAF-216ENST00000574848 TNFSF14O43557 240 aa10.72□□□□□ -0.69
LITAF-216ENST00000574848 TMCC1O94876 653 aa10.72□□□□□ -0.69
LITAF-216ENST00000574848 KRT7P08729 469 aa10.72□□□□□ -0.69
LITAF-216ENST00000574848 HNRNPA2B1P22626 353 aaKnown RBP10.72□□□□□ -0.69
LITAF-216ENST00000574848 PSMA2P25787 234 aa10.72□□□□□ -0.69
LITAF-216ENST00000574848 MAT2AP31153 395 aaKnown RBP10.72□□□□□ -0.69
LITAF-216ENST00000574848 ARRB1P49407 418 aaPredicted RBP10.72□□□□□ -0.69
LITAF-216ENST00000574848 ZNF135P52742 658 aaPredicted RBP10.72□□□□□ -0.69
LITAF-216ENST00000574848 COPS2P61201 443 aa10.72□□□□□ -0.69
LITAF-216ENST00000574848 SNRPD1P62314 119 aaKnown RBP10.72□□□□□ -0.69
LITAF-216ENST00000574848 ZNF211Q13398 564 aaPredicted RBP10.72□□□□□ -0.69
LITAF-216ENST00000574848 SERINC3Q13530 473 aa10.72□□□□□ -0.69
LITAF-216ENST00000574848 SCYL2Q6P3W7 929 aa10.72□□□□□ -0.69
LITAF-216ENST00000574848 POLNQ7Z5Q5 900 aa10.72□□□□□ -0.69
LITAF-216ENST00000574848 ABI3BPQ7Z7G0 1075 aa10.72□□□□□ -0.69
LITAF-216ENST00000574848 SLCO6A1Q86UG4 719 aa10.72□□□□□ -0.69
LITAF-216ENST00000574848 SLC13A5Q86YT5 568 aaPredicted RBP10.72□□□□□ -0.69
LITAF-216ENST00000574848 CCDC50Q8IVM0 306 aa10.72□□□□□ -0.69
LITAF-216ENST00000574848 RCOR2Q8IZ40 523 aa10.72□□□□□ -0.69
LITAF-216ENST00000574848 CHCHD4Q8N4Q1 142 aa10.72□□□□□ -0.69
LITAF-216ENST00000574848 FAM174AQ8TBP5 190 aa10.72□□□□□ -0.69
LITAF-216ENST00000574848 GRK7Q8WTQ7 553 aa10.72□□□□□ -0.69
LITAF-216ENST00000574848 KRT35Q92764 455 aa10.72□□□□□ -0.69
LITAF-216ENST00000574848 CAVIN3Q969G5 261 aa10.72□□□□□ -0.69
LITAF-216ENST00000574848 RAB7BQ96AH8 199 aa10.72□□□□□ -0.69
LITAF-216ENST00000574848 HMCESQ96FZ2 354 aa10.72□□□□□ -0.69
LITAF-216ENST00000574848 BTBD6Q96KE9 485 aa10.72□□□□□ -0.69
LITAF-216ENST00000574848 PEBP4Q96S96 227 aa10.72□□□□□ -0.69
LITAF-216ENST00000574848 TM6SF2Q9BZW4 377 aa10.72□□□□□ -0.69
LITAF-216ENST00000574848 ZDHHC6Q9H6R6 413 aa10.72□□□□□ -0.69
LITAF-216ENST00000574848 LRRC19Q9H756 370 aa10.72□□□□□ -0.69
LITAF-216ENST00000574848 EPB41L5Q9HCM4 733 aa10.72□□□□□ -0.69
LITAF-216ENST00000574848 DONSONQ9NYP3 566 aa10.72□□□□□ -0.69
LITAF-216ENST00000574848 HECAQ9UBI9 543 aaPredicted RBP10.72□□□□□ -0.69
LITAF-216ENST00000574848 DMGDHQ9UI17 866 aaKnown RBP10.72□□□□□ -0.69
LITAF-216ENST00000574848 AP4E1Q9UPM8 1137 aa10.72□□□□□ -0.69
LITAF-216ENST00000574848 MFHAS1Q9Y4C4 1052 aa10.72□□□□□ -0.69
LITAF-216ENST00000574848 FADS3Q9Y5Q0 445 aa10.72□□□□□ -0.69
LITAF-216ENST00000574848 RASA4BC9J798 803 aa10.71□□□□□ -0.69
LITAF-216ENST00000574848 RASA4O43374 803 aa10.71□□□□□ -0.69
LITAF-216ENST00000574848 CREB3O43889 395 aa10.71□□□□□ -0.69
LITAF-216ENST00000574848 LRCH4O75427 683 aa10.71□□□□□ -0.69
LITAF-216ENST00000574848 RNF8O76064 485 aa10.71□□□□□ -0.69
LITAF-216ENST00000574848 ATXN1LP0C7T5 689 aaKnown RBP10.71□□□□□ -0.69
LITAF-216ENST00000574848 PYGMP11217 842 aa10.71□□□□□ -0.69
LITAF-216ENST00000574848 AKT2P31751 481 aa10.71□□□□□ -0.69
LITAF-216ENST00000574848 PCK1P35558 622 aa10.71□□□□□ -0.69
LITAF-216ENST00000574848 ABL2P42684 1182 aa10.71□□□□□ -0.69
LITAF-216ENST00000574848 NDST2P52849 883 aa10.71□□□□□ -0.69
LITAF-216ENST00000574848 TPI1P60174 286 aa10.71□□□□□ -0.69
LITAF-216ENST00000574848 RPS21P63220 83 aaKnown RBP10.71□□□□□ -0.69
LITAF-216ENST00000574848 IL9RQ01113 521 aa10.71□□□□□ -0.69
LITAF-216ENST00000574848 SLC7A5Q01650 507 aa10.71□□□□□ -0.69
LITAF-216ENST00000574848 HLTFQ14527 1009 aaKnown RBP eCLIP10.71□□□□□ -0.69
LITAF-216ENST00000574848 STAT4Q14765 748 aa10.71□□□□□ -0.69
LITAF-216ENST00000574848 CASP8Q14790 479 aa10.71□□□□□ -0.69
LITAF-216ENST00000574848 CYP1B1Q16678 543 aa10.71□□□□□ -0.69
LITAF-216ENST00000574848 ZNF805Q5CZA5 627 aa10.71□□□□□ -0.69
LITAF-216ENST00000574848 ZFYVE27Q5T4F4 411 aa10.71□□□□□ -0.69
LITAF-216ENST00000574848 AFMIDQ63HM1 303 aa10.71□□□□□ -0.69
LITAF-216ENST00000574848 SEL1L3Q68CR1 1132 aa10.71□□□□□ -0.69
LITAF-216ENST00000574848 KYAT3Q6YP21 454 aaKnown RBP10.71□□□□□ -0.69
LITAF-216ENST00000574848 GCNT7Q6ZNI0 430 aa10.71□□□□□ -0.69
LITAF-216ENST00000574848 SYDE1Q6ZW31 735 aaPredicted RBP10.71□□□□□ -0.69
LITAF-216ENST00000574848 WDFY3Q8IZQ1 3526 aa10.71□□□□□ -0.69
LITAF-216ENST00000574848 DENND6BQ8NEG7 585 aa10.71□□□□□ -0.69
LITAF-216ENST00000574848 AENQ8WTP8 325 aaKnown RBP10.71□□□□□ -0.69
LITAF-216ENST00000574848 ASB12Q8WXK4 309 aa10.71□□□□□ -0.69
LITAF-216ENST00000574848 MAGOHBQ96A72 148 aaKnown RBP10.71□□□□□ -0.69
LITAF-216ENST00000574848 GDAP1L1Q96MZ0 367 aa10.71□□□□□ -0.69
LITAF-216ENST00000574848 RUFY1Q96T51 708 aa10.71□□□□□ -0.69
LITAF-216ENST00000574848 SNRNP25Q9BV90 132 aaKnown RBP10.71□□□□□ -0.69
LITAF-216ENST00000574848 TRIM7Q9C029 511 aa10.71□□□□□ -0.69
LITAF-216ENST00000574848 KLC2Q9H0B6 622 aa10.71□□□□□ -0.69
LITAF-216ENST00000574848 DDX47Q9H0S4 455 aaKnown RBP10.71□□□□□ -0.69
LITAF-216ENST00000574848 MED4Q9NPJ6 270 aa10.71□□□□□ -0.69
LITAF-216ENST00000574848 LHX3Q9UBR4 397 aa10.71□□□□□ -0.69
LITAF-216ENST00000574848 FTSJ1Q9UET6 329 aa10.71□□□□□ -0.69
LITAF-216ENST00000574848 PCYOX1Q9UHG3 505 aa10.71□□□□□ -0.69
LITAF-216ENST00000574848 PLXNB3Q9ULL4 1909 aa10.71□□□□□ -0.69
LITAF-216ENST00000574848 PCDHGA1Q9Y5H4 931 aa10.71□□□□□ -0.69
LITAF-216ENST00000574848 TRPM6Q9BX84 2022 aa10.7□□□□□ -0.7
LITAF-216ENST00000574848 FREM2Q5SZK8 3169 aa10.7□□□□□ -0.7
LITAF-216ENST00000574848 TSPAN11A1L157 253 aa10.7□□□□□ -0.7
LITAF-216ENST00000574848 C16orf96A6NNT2 1141 aa10.7□□□□□ -0.7
LITAF-216ENST00000574848 NDC80O14777 642 aa10.7□□□□□ -0.7
LITAF-216ENST00000574848 AREL1O15033 823 aa10.7□□□□□ -0.7
LITAF-216ENST00000574848 TSPAN6O43657 245 aa10.7□□□□□ -0.7
LITAF-216ENST00000574848 PRAMEF11O60813 436 aa10.7□□□□□ -0.7
LITAF-216ENST00000574848 TJP3O95049 919 aa10.7□□□□□ -0.7
LITAF-216ENST00000574848 POP4O95707 220 aaKnown RBP10.7□□□□□ -0.7
LITAF-216ENST00000574848 IGSF6O95976 241 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms