RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 ARMC12Q5T9G4 340 aa11.12□□□□□ -0.63
CHD3-216ENST00000573936 AADACL2Q6P093 401 aa11.12□□□□□ -0.63
CHD3-216ENST00000573936 SLC23A3Q6PIS1 610 aa11.12□□□□□ -0.63
CHD3-216ENST00000573936 UNQ6494/PRO21346Q6UXR6 183 aa11.12□□□□□ -0.63
CHD3-216ENST00000573936 HORMAD1Q86X24 394 aa11.12□□□□□ -0.63
CHD3-216ENST00000573936 CAMK1DQ8IU85 385 aa11.12□□□□□ -0.63
CHD3-216ENST00000573936 CDKL3Q8IVW4 592 aaPredicted RBP11.12□□□□□ -0.63
CHD3-216ENST00000573936 ACTL9Q8TC94 416 aa11.12□□□□□ -0.63
CHD3-216ENST00000573936 LRRN4Q8WUT4 740 aa11.12□□□□□ -0.63
CHD3-216ENST00000573936 MAIP1Q8WWC4 291 aa11.12□□□□□ -0.63
CHD3-216ENST00000573936 SPOCK2Q92563 424 aa11.12□□□□□ -0.63
CHD3-216ENST00000573936 VOPP1Q96AW1 172 aa11.12□□□□□ -0.63
CHD3-216ENST00000573936 SKA1Q96BD8 255 aa11.12□□□□□ -0.63
CHD3-216ENST00000573936 ECHDC3Q96DC8 303 aa11.12□□□□□ -0.63
CHD3-216ENST00000573936 QKIQ96PU8 341 aaKnown RBP eCLIP11.12□□□□□ -0.634e-12■■■■■ 71
CHD3-216ENST00000573936 EDEM2Q9BV94 578 aa11.12□□□□□ -0.63
CHD3-216ENST00000573936 MIR1-1HGQ9H1L0 117 aa11.12□□□□□ -0.63
CHD3-216ENST00000573936 EIF2B4Q9UI10 523 aaKnown RBP11.12□□□□□ -0.63
CHD3-216ENST00000573936 TRHDEQ9UKU6 1024 aa11.12□□□□□ -0.63
CHD3-216ENST00000573936 ZMIZ1Q9ULJ6 1067 aa11.12□□□□□ -0.63
CHD3-216ENST00000573936 PHTF1Q9UMS5 762 aa11.12□□□□□ -0.63
CHD3-216ENST00000573936 DMTF1Q9Y222 760 aa11.12□□□□□ -0.63
CHD3-216ENST00000573936 THADAQ6YHU6 1953 aa11.11□□□□□ -0.63
CHD3-216ENST00000573936 CFAP69A5D8W1 941 aa11.11□□□□□ -0.63
CHD3-216ENST00000573936 KCNK3O14649 394 aa11.11□□□□□ -0.63
CHD3-216ENST00000573936 BCAT2O15382 392 aaPredicted RBP11.11□□□□□ -0.63
CHD3-216ENST00000573936 LATO43561 262 aa11.11□□□□□ -0.63
CHD3-216ENST00000573936 STK10O94804 968 aaKnown RBP11.11□□□□□ -0.63
CHD3-216ENST00000573936 CPP00450 1065 aa11.11□□□□□ -0.63
CHD3-216ENST00000573936 IGHV4-34P06331 123 aa11.11□□□□□ -0.63
CHD3-216ENST00000573936 SYPP08247 313 aa11.11□□□□□ -0.63
CHD3-216ENST00000573936 RBP3P10745 1247 aa11.11□□□□□ -0.63
CHD3-216ENST00000573936 PTPN3P26045 913 aa11.11□□□□□ -0.63
CHD3-216ENST00000573936 MAOBP27338 520 aa11.11□□□□□ -0.63
CHD3-216ENST00000573936 ABL2P42684 1182 aa11.11□□□□□ -0.63
CHD3-216ENST00000573936 DSC2Q02487 901 aa11.11□□□□□ -0.63
CHD3-216ENST00000573936 FOXC1Q12948 553 aa11.11□□□□□ -0.63
CHD3-216ENST00000573936 ZBTB17Q13105 803 aa11.11□□□□□ -0.63
CHD3-216ENST00000573936 SGCGQ13326 291 aa11.11□□□□□ -0.63
CHD3-216ENST00000573936 KLF1Q13351 362 aaPredicted RBP11.11□□□□□ -0.63
CHD3-216ENST00000573936 TEAD4Q15561 434 aa11.11□□□□□ -0.63
CHD3-216ENST00000573936 SLC14A2Q15849 920 aa11.11□□□□□ -0.63
CHD3-216ENST00000573936 TMEM52BQ4KMG9 183 aa11.11□□□□□ -0.63
CHD3-216ENST00000573936 SETMARQ53H47 684 aaPredicted RBP11.11□□□□□ -0.63
CHD3-216ENST00000573936 ZNF569Q5MCW4 686 aa11.11□□□□□ -0.63
CHD3-216ENST00000573936 DARS2Q6PI48 645 aaKnown RBP11.11□□□□□ -0.63
CHD3-216ENST00000573936 CNTD1Q8N815 330 aa11.11□□□□□ -0.63
CHD3-216ENST00000573936 CXorf40AQ8TE69 158 aa11.11□□□□□ -0.63
CHD3-216ENST00000573936 PDCD6IPQ8WUM4 868 aaKnown RBP11.11□□□□□ -0.63
CHD3-216ENST00000573936 HTR3CQ8WXA8 447 aa11.11□□□□□ -0.63
CHD3-216ENST00000573936 ASB12Q8WXK4 309 aa11.11□□□□□ -0.63
CHD3-216ENST00000573936 TEKT5Q96M29 485 aa11.11□□□□□ -0.63
CHD3-216ENST00000573936 AGAP3Q96P47 875 aa11.11□□□□□ -0.63
CHD3-216ENST00000573936 SLC25A51Q9H1U9 297 aa11.11□□□□□ -0.63
CHD3-216ENST00000573936 TMEM74BQ9NUR3 256 aa11.11□□□□□ -0.63
CHD3-216ENST00000573936 SLC6A14Q9UN76 642 aa11.11□□□□□ -0.63
CHD3-216ENST00000573936 PCDHGC4Q9Y5F7 938 aa11.11□□□□□ -0.63
CHD3-216ENST00000573936 RAI2Q9Y5P3 530 aa11.11□□□□□ -0.63
CHD3-216ENST00000573936 ZFYVE26Q68DK2 2539 aa11.11□□□□□ -0.63
CHD3-216ENST00000573936 FREM2Q5SZK8 3169 aa11.11□□□□□ -0.63
CHD3-216ENST00000573936 ATXN2Q99700 1313 aaKnown RBP11.1□□□□□ -0.63
CHD3-216ENST00000573936 A0A1W2PQU0 124 aa11.1□□□□□ -0.63
CHD3-216ENST00000573936 TTC24A2A3L6 582 aaPredicted RBP11.1□□□□□ -0.63
CHD3-216ENST00000573936 C4orf47A7E2U8 309 aa11.1□□□□□ -0.63
CHD3-216ENST00000573936 C1QTNF9BB2RNN3 333 aa11.1□□□□□ -0.63
CHD3-216ENST00000573936 PRAMEF26H0Y7S4 382 aa11.1□□□□□ -0.63
CHD3-216ENST00000573936 RIOK3O14730 519 aaKnown RBP11.1□□□□□ -0.63
CHD3-216ENST00000573936 AREL1O15033 823 aa11.1□□□□□ -0.63
CHD3-216ENST00000573936 GJB3O75712 270 aa11.1□□□□□ -0.63
CHD3-216ENST00000573936 PGLSO95336 258 aa11.1□□□□□ -0.63
CHD3-216ENST00000573936 CFIP05156 583 aa11.1□□□□□ -0.63
CHD3-216ENST00000573936 C1QTNF9P0C862 333 aa11.1□□□□□ -0.63
CHD3-216ENST00000573936 CYP2A6P11509 494 aaPredicted RBP11.1□□□□□ -0.63
CHD3-216ENST00000573936 RBL1P28749 1068 aa11.1□□□□□ -0.63
CHD3-216ENST00000573936 AKT2P31751 481 aa11.1□□□□□ -0.63
CHD3-216ENST00000573936 AFF3P51826 1226 aaKnown RBP11.1□□□□□ -0.63
CHD3-216ENST00000573936 EPHB1P54762 984 aa11.1□□□□□ -0.63
CHD3-216ENST00000573936 RPL26P61254 145 aaKnown RBP11.1□□□□□ -0.63
CHD3-216ENST00000573936 PPP2CBP62714 309 aa11.1□□□□□ -0.63
CHD3-216ENST00000573936 RACK1P63244 317 aaKnown RBP11.1□□□□□ -0.63
CHD3-216ENST00000573936 PPP2CAP67775 309 aa11.1□□□□□ -0.63
CHD3-216ENST00000573936 NIPAL4Q0D2K0 466 aa11.1□□□□□ -0.63
CHD3-216ENST00000573936 ZNF284Q2VY69 593 aa11.1□□□□□ -0.63
CHD3-216ENST00000573936 TRIM61Q5EBN2 209 aa11.1□□□□□ -0.63
CHD3-216ENST00000573936 B4GALNT4Q76KP1 1039 aa11.1□□□□□ -0.63
CHD3-216ENST00000573936 PID1Q7Z2X4 250 aa11.1□□□□□ -0.63
CHD3-216ENST00000573936 SLC13A5Q86YT5 568 aaPredicted RBP11.1□□□□□ -0.63
CHD3-216ENST00000573936 ARRDC2Q8TBH0 407 aa11.1□□□□□ -0.63
CHD3-216ENST00000573936 FAM174AQ8TBP5 190 aa11.1□□□□□ -0.63
CHD3-216ENST00000573936 SERAC1Q96JX3 654 aa11.1□□□□□ -0.63
CHD3-216ENST00000573936 PBKQ96KB5 322 aa11.1□□□□□ -0.63
CHD3-216ENST00000573936 HERPUD2Q9BSE4 406 aa11.1□□□□□ -0.63
CHD3-216ENST00000573936 C1QTNF7Q9BXJ2 289 aa11.1□□□□□ -0.63
CHD3-216ENST00000573936 TLR10Q9BXR5 811 aa11.1□□□□□ -0.63
CHD3-216ENST00000573936 ZDHHC5Q9C0B5 715 aa11.1□□□□□ -0.63
CHD3-216ENST00000573936 GLOD4Q9HC38 313 aa11.1□□□□□ -0.63
CHD3-216ENST00000573936 PCDH12Q9NPG4 1184 aa11.1□□□□□ -0.63
CHD3-216ENST00000573936 KLHL8Q9P2G9 620 aaPredicted RBP11.1□□□□□ -0.63
CHD3-216ENST00000573936 DNPEPQ9ULA0 475 aa11.1□□□□□ -0.63
CHD3-216ENST00000573936 RPL26L1Q9UNX3 145 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms