RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 SEMG2Q02383 582 aa10.17□□□□□ -0.78
SMG6-213ENST00000573166 DHCR24Q15392 516 aa10.17□□□□□ -0.78
SMG6-213ENST00000573166 PITRM1Q5JRX3 1037 aa10.17□□□□□ -0.78
SMG6-213ENST00000573166 STXBP5Q5T5C0 1151 aa10.17□□□□□ -0.78
SMG6-213ENST00000573166 ANKRD22Q5VYY1 191 aa10.17□□□□□ -0.78
SMG6-213ENST00000573166 PKN3Q6P5Z2 889 aa10.17□□□□□ -0.78
SMG6-213ENST00000573166 OOSP2Q86WS3 158 aa10.17□□□□□ -0.78
SMG6-213ENST00000573166 TMEM25Q86YD3 366 aa10.17□□□□□ -0.78
SMG6-213ENST00000573166 OR4L1Q8NH43 312 aa10.17□□□□□ -0.78
SMG6-213ENST00000573166 BCL7CQ8WUZ0 217 aaPredicted RBP10.17□□□□□ -0.78
SMG6-213ENST00000573166 PRCCQ92733 491 aaPredicted RBP10.17□□□□□ -0.78
SMG6-213ENST00000573166 PPP1R36Q96LQ0 422 aa10.17□□□□□ -0.78
SMG6-213ENST00000573166 PRMT1Q99873 361 aaKnown RBP10.17□□□□□ -0.78
SMG6-213ENST00000573166 SYT11Q9BT88 431 aa10.17□□□□□ -0.78
SMG6-213ENST00000573166 LINC00597Q9H2U6 94 aa10.17□□□□□ -0.78
SMG6-213ENST00000573166 FAM96AQ9H5X1 160 aa10.17□□□□□ -0.78
SMG6-213ENST00000573166 GDE1Q9NZC3 331 aa10.17□□□□□ -0.78
SMG6-213ENST00000573166 HSFX1Q9UBD0 423 aa10.17□□□□□ -0.78
SMG6-213ENST00000573166 CTNNAL1Q9UBT7 734 aa10.17□□□□□ -0.78
SMG6-213ENST00000573166 VPS51Q9UID3 782 aa10.17□□□□□ -0.78
SMG6-213ENST00000573166 DOCK5Q9H7D0 1870 aa10.17□□□□□ -0.78
SMG6-213ENST00000573166 FAM95CA0A1B0GW59 222 aa10.17□□□□□ -0.78
SMG6-213ENST00000573166 TCP11X1B4DZS4 312 aa10.17□□□□□ -0.78
SMG6-213ENST00000573166 ALOX15BO15296 676 aa10.17□□□□□ -0.78
SMG6-213ENST00000573166 PHGDHO43175 533 aaKnown RBP10.17□□□□□ -0.78
SMG6-213ENST00000573166 ZWINTO95229 277 aa10.17□□□□□ -0.78
SMG6-213ENST00000573166 RBP1P09455 135 aa10.17□□□□□ -0.78
SMG6-213ENST00000573166 MZF1P28698 734 aaPredicted RBP10.17□□□□□ -0.78
SMG6-213ENST00000573166 GALNT2Q10471 571 aa10.17□□□□□ -0.78
SMG6-213ENST00000573166 PKDCCQ504Y2 493 aa10.17□□□□□ -0.78
SMG6-213ENST00000573166 SPATA24Q86W54 205 aa10.17□□□□□ -0.78
SMG6-213ENST00000573166 LMNTD2Q8IXW0 634 aa10.17□□□□□ -0.78
SMG6-213ENST00000573166 CD101Q93033 1021 aa10.17□□□□□ -0.78
SMG6-213ENST00000573166 SIPA1Q96FS4 1042 aa10.17□□□□□ -0.78
SMG6-213ENST00000573166 ZBTB18Q99592 522 aa10.17□□□□□ -0.78
SMG6-213ENST00000573166 ABCG8Q9H221 673 aa10.17□□□□□ -0.78
SMG6-213ENST00000573166 ZNF334Q9HCZ1 680 aaPredicted RBP10.17□□□□□ -0.78
SMG6-213ENST00000573166 ELOVL2Q9NXB9 296 aa10.17□□□□□ -0.78
SMG6-213ENST00000573166 IGSF9Q9P2J2 1179 aa10.17□□□□□ -0.78
SMG6-213ENST00000573166 GMNCA6NCL1 334 aa10.17□□□□□ -0.78
SMG6-213ENST00000573166 PRPF4O43172 522 aaKnown RBP eCLIP10.17□□□□□ -0.78
SMG6-213ENST00000573166 CCNHP51946 323 aaPredicted RBP10.17□□□□□ -0.78
SMG6-213ENST00000573166 ZNF252P-AS1Q0IIN9 211 aa10.17□□□□□ -0.78
SMG6-213ENST00000573166 SERINC3Q13530 473 aa10.17□□□□□ -0.78
SMG6-213ENST00000573166 RUNX3Q13761 415 aa10.17□□□□□ -0.78
SMG6-213ENST00000573166 ANKRD20A4Q4UJ75 823 aa10.17□□□□□ -0.78
SMG6-213ENST00000573166 SGO1Q5FBB7 561 aa10.17□□□□□ -0.78
SMG6-213ENST00000573166 SPDYAQ5MJ70 313 aa10.17□□□□□ -0.78
SMG6-213ENST00000573166 RTL10Q7L3V2 364 aa10.17□□□□□ -0.78
SMG6-213ENST00000573166 PCDH20Q8N6Y1 951 aaKnown RBP10.17□□□□□ -0.78
SMG6-213ENST00000573166 SHKBP1Q8TBC3 707 aa10.17□□□□□ -0.78
SMG6-213ENST00000573166 MDM1Q8TC05 714 aa10.17□□□□□ -0.78
SMG6-213ENST00000573166 TRMT2BQ96GJ1 504 aaKnown RBP10.17□□□□□ -0.78
SMG6-213ENST00000573166 FCRL5Q96RD9 977 aa10.17□□□□□ -0.78
SMG6-213ENST00000573166 P2RY13Q9BPV8 354 aa10.17□□□□□ -0.78
SMG6-213ENST00000573166 ZNHIT2Q9UHR6 403 aa10.17□□□□□ -0.78
SMG6-213ENST00000573166 BRCA1P38398 1863 aaKnown RBP10.17□□□□□ -0.78
SMG6-213ENST00000573166 CCL22O00626 93 aa10.16□□□□□ -0.78
SMG6-213ENST00000573166 HLA-EP13747 358 aa10.16□□□□□ -0.78
SMG6-213ENST00000573166 ITGB8P26012 769 aa10.16□□□□□ -0.78
SMG6-213ENST00000573166 LSP1P33241 339 aa10.16□□□□□ -0.78
SMG6-213ENST00000573166 ARSIQ5FYB1 569 aa10.16□□□□□ -0.78
SMG6-213ENST00000573166 RAB41Q5JT25 222 aa10.16□□□□□ -0.78
SMG6-213ENST00000573166 RSPO2Q6UXX9 243 aaPredicted RBP10.16□□□□□ -0.78
SMG6-213ENST00000573166 ZNF398Q8TD17 642 aa10.16□□□□□ -0.78
SMG6-213ENST00000573166 AP2M1Q96CW1 435 aa10.16□□□□□ -0.78
SMG6-213ENST00000573166 TBATAQ96M53 351 aa10.16□□□□□ -0.78
SMG6-213ENST00000573166 SUV39H2Q9H5I1 410 aa10.16□□□□□ -0.78
SMG6-213ENST00000573166 DNMT3BQ9UBC3 853 aaKnown RBP10.16□□□□□ -0.78
SMG6-213ENST00000573166 LOXHD1Q8IVV2 1947 aa10.16□□□□□ -0.78
SMG6-213ENST00000573166 SYCE1LA8MT33 242 aa10.16□□□□□ -0.78
SMG6-213ENST00000573166 H3BMM5 538 aa10.16□□□□□ -0.78
SMG6-213ENST00000573166 SLC31A1O15431 190 aa10.16□□□□□ -0.78
SMG6-213ENST00000573166 MYO1DO94832 1006 aa10.16□□□□□ -0.78
SMG6-213ENST00000573166 ABLIM3O94929 683 aa10.16□□□□□ -0.78
SMG6-213ENST00000573166 MAT2AP31153 395 aaKnown RBP10.16□□□□□ -0.78
SMG6-213ENST00000573166 HALP42357 657 aa10.16□□□□□ -0.78
SMG6-213ENST00000573166 DGKEP52429 567 aa10.16□□□□□ -0.78
SMG6-213ENST00000573166 ARFIP2P53365 341 aa10.16□□□□□ -0.78
SMG6-213ENST00000573166 SCAPQ12770 1279 aa10.16□□□□□ -0.78
SMG6-213ENST00000573166 LMAN2Q12907 356 aa10.16□□□□□ -0.78
SMG6-213ENST00000573166 CRYMQ14894 314 aa10.16□□□□□ -0.78
SMG6-213ENST00000573166 CHI3L2Q15782 390 aa10.16□□□□□ -0.78
SMG6-213ENST00000573166 CYP1B1Q16678 543 aa10.16□□□□□ -0.78
SMG6-213ENST00000573166 FAM133BQ5BKY9 247 aaKnown RBP10.16□□□□□ -0.78
SMG6-213ENST00000573166 HIBCHQ6NVY1 386 aaPredicted RBP10.16□□□□□ -0.78
SMG6-213ENST00000573166 HDDC3Q8N4P3 179 aa10.16□□□□□ -0.78
SMG6-213ENST00000573166 TSTD1Q8NFU3 115 aa10.16□□□□□ -0.78
SMG6-213ENST00000573166 FEM1AQ9BSK4 669 aa10.16□□□□□ -0.78
SMG6-213ENST00000573166 FAM83DQ9H4H8 585 aa10.16□□□□□ -0.78
SMG6-213ENST00000573166 STK38LQ9Y2H1 464 aa10.16□□□□□ -0.78
SMG6-213ENST00000573166 TBC1D30Q9Y2I9 924 aa10.16□□□□□ -0.78
SMG6-213ENST00000573166 LRRC72A6NJI9 287 aa10.16□□□□□ -0.78
SMG6-213ENST00000573166 CACNB4O00305 520 aaPredicted RBP10.16□□□□□ -0.78
SMG6-213ENST00000573166 CD3EAPO15446 510 aaKnown RBP10.16□□□□□ -0.78
SMG6-213ENST00000573166 GUCA1CO95843 209 aa10.16□□□□□ -0.78
SMG6-213ENST00000573166 HOXB2P14652 356 aa10.16□□□□□ -0.78
SMG6-213ENST00000573166 CRABP2P29373 138 aa10.16□□□□□ -0.78
SMG6-213ENST00000573166 DDX39BQ13838 428 aaKnown RBP10.16□□□□□ -0.78
SMG6-213ENST00000573166 RBBP5Q15291 538 aaKnown RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms