RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 KIAA0408Q6ZU52 694 aa11.29□□□□□ -0.6
RPAIN-212ENST00000573126 CIR1Q86X95 450 aaPredicted RBP11.29□□□□□ -0.6
RPAIN-212ENST00000573126 MIB1Q86YT6 1006 aa11.29□□□□□ -0.6
RPAIN-212ENST00000573126 CILP2Q8IUL8 1156 aa11.29□□□□□ -0.6
RPAIN-212ENST00000573126 PELI3Q8N2H9 469 aa11.29□□□□□ -0.6
RPAIN-212ENST00000573126 GALNT4Q8N4A0 578 aa11.29□□□□□ -0.6
RPAIN-212ENST00000573126 EXT2Q93063 718 aa11.29□□□□□ -0.6
RPAIN-212ENST00000573126 HDAC10Q969S8 669 aa11.29□□□□□ -0.6
RPAIN-212ENST00000573126 IMP4Q96G21 291 aaKnown RBP11.29□□□□□ -0.6
RPAIN-212ENST00000573126 PKP2Q99959 881 aa11.29□□□□□ -0.6
RPAIN-212ENST00000573126 MRPL1Q9BYD6 325 aaKnown RBP11.29□□□□□ -0.6
RPAIN-212ENST00000573126 PCDHAC1Q9H158 963 aa11.29□□□□□ -0.6
RPAIN-212ENST00000573126 SP110Q9HB58 689 aa11.29□□□□□ -0.6
RPAIN-212ENST00000573126 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.29□□□□□ -0.6
RPAIN-212ENST00000573126 RIMS3Q9UJD0 308 aa11.29□□□□□ -0.6
RPAIN-212ENST00000573126 NYNRINQ9P2P1 1898 aaKnown RBP11.29□□□□□ -0.6
RPAIN-212ENST00000573126 BCAS2O75934 225 aaPredicted RBP11.28□□□□□ -0.6
RPAIN-212ENST00000573126 SLC4A1P02730 911 aa11.28□□□□□ -0.6
RPAIN-212ENST00000573126 YWHAQP27348 245 aa11.28□□□□□ -0.6
RPAIN-212ENST00000573126 PMLP29590 882 aa11.28□□□□□ -0.6
RPAIN-212ENST00000573126 HTR7P34969 479 aa11.28□□□□□ -0.6
RPAIN-212ENST00000573126 RAB27AP51159 221 aa11.28□□□□□ -0.6
RPAIN-212ENST00000573126 CHN2P52757 468 aa11.28□□□□□ -0.6
RPAIN-212ENST00000573126 USP46P62068 366 aa11.28□□□□□ -0.6
RPAIN-212ENST00000573126 PRAMEP78395 509 aa11.28□□□□□ -0.6
RPAIN-212ENST00000573126 PFKPQ01813 784 aa11.28□□□□□ -0.6
RPAIN-212ENST00000573126 EFEMP1Q12805 493 aa11.28□□□□□ -0.6
RPAIN-212ENST00000573126 RALGDSQ12967 914 aa11.28□□□□□ -0.6
RPAIN-212ENST00000573126 PDAP1Q13442 181 aaKnown RBP11.28□□□□□ -0.6
RPAIN-212ENST00000573126 ADGRE1Q14246 886 aa11.28□□□□□ -0.6
RPAIN-212ENST00000573126 GK3PQ14409 553 aa11.28□□□□□ -0.6
RPAIN-212ENST00000573126 LPIN1Q14693 890 aa11.28□□□□□ -0.6
RPAIN-212ENST00000573126 PTPRCAPQ14761 206 aa11.28□□□□□ -0.6
RPAIN-212ENST00000573126 CST9Q5W186 159 aa11.28□□□□□ -0.6
RPAIN-212ENST00000573126 UGT2A3Q6UWM9 527 aa11.28□□□□□ -0.6
RPAIN-212ENST00000573126 ZNF280BQ86YH2 543 aa11.28□□□□□ -0.6
RPAIN-212ENST00000573126 OR9I1Q8NGQ6 314 aa11.28□□□□□ -0.6
RPAIN-212ENST00000573126 CALML6Q8TD86 181 aa11.28□□□□□ -0.6
RPAIN-212ENST00000573126 PPP1R2P1Q96PQ5 205 aa11.28□□□□□ -0.6
RPAIN-212ENST00000573126 BTBD9Q96Q07 612 aa11.28□□□□□ -0.6
RPAIN-212ENST00000573126 CENPKQ9BS16 269 aa11.28□□□□□ -0.6
RPAIN-212ENST00000573126 SPATA16Q9BXB7 569 aa11.28□□□□□ -0.6
RPAIN-212ENST00000573126 TRIM4Q9C037 500 aa11.28□□□□□ -0.6
RPAIN-212ENST00000573126 UXTQ9UBK9 157 aaPredicted RBP11.28□□□□□ -0.6
RPAIN-212ENST00000573126 VPS28Q9UK41 221 aa11.28□□□□□ -0.6
RPAIN-212ENST00000573126 E7ENX8 843 aa11.28□□□□□ -0.6
RPAIN-212ENST00000573126 UBFD1O14562 309 aaKnown RBP11.28□□□□□ -0.6
RPAIN-212ENST00000573126 ACOT8O14734 319 aa11.28□□□□□ -0.6
RPAIN-212ENST00000573126 UBDO15205 165 aa11.28□□□□□ -0.6
RPAIN-212ENST00000573126 DNAJA2O60884 412 aa11.28□□□□□ -0.6
RPAIN-212ENST00000573126 SUPT7LO94864 414 aa11.28□□□□□ -0.6
RPAIN-212ENST00000573126 MMP2P08253 660 aa11.28□□□□□ -0.6
RPAIN-212ENST00000573126 HMBSP08397 361 aa11.28□□□□□ -0.6
RPAIN-212ENST00000573126 CLCN5P51795 746 aa11.28□□□□□ -0.6
RPAIN-212ENST00000573126 CNPY1Q3B7I2 92 aa11.28□□□□□ -0.6
RPAIN-212ENST00000573126 AGKQ53H12 422 aa11.28□□□□□ -0.6
RPAIN-212ENST00000573126 MS4A13Q5J8X5 152 aa11.28□□□□□ -0.6
RPAIN-212ENST00000573126 LAYNQ6UX15 382 aa11.28□□□□□ -0.6
RPAIN-212ENST00000573126 C17orf99Q6UX52 265 aa11.28□□□□□ -0.6
RPAIN-212ENST00000573126 SATL1Q86VE3 508 aa11.28□□□□□ -0.6
RPAIN-212ENST00000573126 TTC9BQ8N6N2 239 aa11.28□□□□□ -0.6
RPAIN-212ENST00000573126 OR52K2Q8NGK3 314 aa11.28□□□□□ -0.6
RPAIN-212ENST00000573126 UBXN10Q96LJ8 280 aa11.28□□□□□ -0.6
RPAIN-212ENST00000573126 ARNT2Q9HBZ2 717 aa11.28□□□□□ -0.6
RPAIN-212ENST00000573126 UBAP1Q9NZ09 502 aa11.28□□□□□ -0.6
RPAIN-212ENST00000573126 TLR6Q9Y2C9 796 aa11.28□□□□□ -0.6
RPAIN-212ENST00000573126 VWA7Q9Y334 891 aa11.28□□□□□ -0.6
RPAIN-212ENST00000573126 PCDHGA7Q9Y5G6 932 aa11.28□□□□□ -0.6
RPAIN-212ENST00000573126 PSMD12O00232 456 aaPredicted RBP11.27□□□□□ -0.61
RPAIN-212ENST00000573126 SOAT2O75908 522 aa11.27□□□□□ -0.61
RPAIN-212ENST00000573126 CRTAMO95727 393 aa11.27□□□□□ -0.61
RPAIN-212ENST00000573126 PIRTP0C851 137 aa11.27□□□□□ -0.61
RPAIN-212ENST00000573126 HSPA1AP0DMV8 641 aaKnown RBP11.27□□□□□ -0.61
RPAIN-212ENST00000573126 HSPA1BP0DMV9 641 aaKnown RBP11.27□□□□□ -0.61
RPAIN-212ENST00000573126 ZNF157P51786 506 aaPredicted RBP11.27□□□□□ -0.61
RPAIN-212ENST00000573126 CDH13P55290 713 aa11.27□□□□□ -0.61
RPAIN-212ENST00000573126 TBX4P57082 545 aa11.27□□□□□ -0.61
RPAIN-212ENST00000573126 PSME3P61289 254 aa11.27□□□□□ -0.61
RPAIN-212ENST00000573126 ROR2Q01974 943 aaKnown RBP11.27□□□□□ -0.61
RPAIN-212ENST00000573126 FASTKQ14296 549 aaKnown RBP11.27□□□□□ -0.61
RPAIN-212ENST00000573126 GRM2Q14416 872 aa11.27□□□□□ -0.61
RPAIN-212ENST00000573126 SIRPB2Q5JXA9 342 aa11.27□□□□□ -0.61
RPAIN-212ENST00000573126 ZFP1Q6P2D0 407 aa11.27□□□□□ -0.61
RPAIN-212ENST00000573126 UMODL1-AS1Q8N2C9 162 aa11.27□□□□□ -0.61
RPAIN-212ENST00000573126 RYBPQ8N488 228 aaPredicted RBP11.27□□□□□ -0.61
RPAIN-212ENST00000573126 SOCS4Q8WXH5 440 aa11.27□□□□□ -0.61
RPAIN-212ENST00000573126 ATP6V1E2Q96A05 226 aa11.27□□□□□ -0.61
RPAIN-212ENST00000573126 CNBD2Q96M20 576 aa11.27□□□□□ -0.61
RPAIN-212ENST00000573126 ZYG11BQ9C0D3 744 aa11.27□□□□□ -0.61
RPAIN-212ENST00000573126 FBRSL1Q9HCM7 1045 aaKnown RBP11.27□□□□□ -0.61
RPAIN-212ENST00000573126 CACNA2D2Q9NY47 1150 aa11.27□□□□□ -0.61
RPAIN-212ENST00000573126 GMIPQ9P107 970 aa11.27□□□□□ -0.61
RPAIN-212ENST00000573126 PRG3Q9Y2Y8 225 aaPredicted RBP11.27□□□□□ -0.61
RPAIN-212ENST00000573126 COL4A4P53420 1690 aaPredicted RBP11.27□□□□□ -0.61
RPAIN-212ENST00000573126 FBP2O00757 339 aa11.27□□□□□ -0.61
RPAIN-212ENST00000573126 GPC4O75487 556 aa11.27□□□□□ -0.61
RPAIN-212ENST00000573126 TRPA1O75762 1119 aa11.27□□□□□ -0.61
RPAIN-212ENST00000573126 RNASEH2AO75792 299 aaKnown RBP11.27□□□□□ -0.61
RPAIN-212ENST00000573126 IGHA2P01877 340 aa11.27□□□□□ -0.61
RPAIN-212ENST00000573126 ASGR1P07306 291 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms