RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 OLFM3Q96PB7 478 aa16.31■□□□□ 0.2
RAB40B-206ENST00000571995 NUP214P35658 2090 aaPredicted RBP16.31■□□□□ 0.2
RAB40B-206ENST00000571995 ZBTB14O43829 449 aa16.31■□□□□ 0.2
RAB40B-206ENST00000571995 FUT10Q6P4F1 479 aa16.31■□□□□ 0.2
RAB40B-206ENST00000571995 ALKAL1Q6UXT8 129 aa16.31■□□□□ 0.2
RAB40B-206ENST00000571995 SERINC5Q86VE9 423 aa16.31■□□□□ 0.2
RAB40B-206ENST00000571995 IGSF8Q969P0 613 aa16.31■□□□□ 0.2
RAB40B-206ENST00000571995 ZNF184Q99676 751 aaPredicted RBP16.31■□□□□ 0.2
RAB40B-206ENST00000571995 SMG9Q9H0W8 520 aaKnown RBP16.31■□□□□ 0.2
RAB40B-206ENST00000571995 TNKS2Q9H2K2 1166 aa16.31■□□□□ 0.2
RAB40B-206ENST00000571995 WDR41Q9HAD4 459 aa16.31■□□□□ 0.2
RAB40B-206ENST00000571995 ENTPD7Q9NQZ7 604 aa16.31■□□□□ 0.2
RAB40B-206ENST00000571995 ZFP37Q9Y6Q3 630 aaPredicted RBP16.31■□□□□ 0.2
RAB40B-206ENST00000571995 MYOCOSA0A1B0GUC4 107 aa16.3■□□□□ 0.2
RAB40B-206ENST00000571995 SAC3D1A6NKF1 404 aa16.3■□□□□ 0.2
RAB40B-206ENST00000571995 BIRC5O15392 142 aa16.3■□□□□ 0.2
RAB40B-206ENST00000571995 DNAJA2O60884 412 aa16.3■□□□□ 0.2
RAB40B-206ENST00000571995 ARSDP51689 593 aa16.3■□□□□ 0.2
RAB40B-206ENST00000571995 FASTKQ14296 549 aaKnown RBP16.3■□□□□ 0.2
RAB40B-206ENST00000571995 PAFAH1B3Q15102 231 aaKnown RBP16.3■□□□□ 0.2
RAB40B-206ENST00000571995 RNF19BQ6ZMZ0 732 aa16.3■□□□□ 0.2
RAB40B-206ENST00000571995 CALML6Q8TD86 181 aa16.3■□□□□ 0.2
RAB40B-206ENST00000571995 NCLNQ969V3 563 aa16.3■□□□□ 0.2
RAB40B-206ENST00000571995 MIEF2Q96C03 454 aa16.3■□□□□ 0.2
RAB40B-206ENST00000571995 TRIM4Q9C037 500 aa16.3■□□□□ 0.2
RAB40B-206ENST00000571995 POLR1EQ9GZS1 481 aaKnown RBP16.3■□□□□ 0.2
RAB40B-206ENST00000571995 SSU72Q9NP77 194 aaKnown RBP16.3■□□□□ 0.2
RAB40B-206ENST00000571995 SUN2Q9UH99 717 aa16.3■□□□□ 0.2
RAB40B-206ENST00000571995 ZNHIT2Q9UHR6 403 aa16.3■□□□□ 0.2
RAB40B-206ENST00000571995 DTNAQ9Y4J8 743 aa16.3■□□□□ 0.2
RAB40B-206ENST00000571995 MAGEB16A2A368 324 aa16.3■□□□□ 0.2
RAB40B-206ENST00000571995 CAPRIN1Q14444 709 aaKnown RBP16.3■□□□□ 0.2
RAB40B-206ENST00000571995 LIPMQ5VYY2 423 aa16.3■□□□□ 0.2
RAB40B-206ENST00000571995 PDZD8Q8NEN9 1154 aa16.3■□□□□ 0.2
RAB40B-206ENST00000571995 ACOX2Q99424 681 aa16.3■□□□□ 0.2
RAB40B-206ENST00000571995 SEPHS2Q99611 448 aa16.3■□□□□ 0.2
RAB40B-206ENST00000571995 UBA2Q9UBT2 640 aaPredicted RBP16.3■□□□□ 0.2
RAB40B-206ENST00000571995 FCF1Q9Y324 198 aaKnown RBP16.3■□□□□ 0.2
RAB40B-206ENST00000571995 ASCC3Q8N3C0 2202 aaKnown RBP16.3■□□□□ 0.2
RAB40B-206ENST00000571995 TM7SF2O76062 418 aa16.3■□□□□ 0.2
RAB40B-206ENST00000571995 GJB5O95377 273 aa16.3■□□□□ 0.2
RAB40B-206ENST00000571995 CTGFP29279 349 aa16.3■□□□□ 0.2
RAB40B-206ENST00000571995 RCOR3Q9P2K3 495 aaPredicted RBP16.3■□□□□ 0.2
RAB40B-206ENST00000571995 VWA7Q9Y334 891 aa16.3■□□□□ 0.2
RAB40B-206ENST00000571995 SH3BP1Q9Y3L3 701 aa16.3■□□□□ 0.2
RAB40B-206ENST00000571995 ZCWPW2A0A1B0GU75 182 aa16.29■□□□□ 0.2
RAB40B-206ENST00000571995 UBXN8O00124 270 aa16.29■□□□□ 0.2
RAB40B-206ENST00000571995 PARNO95453 639 aaKnown RBP16.29■□□□□ 0.2
RAB40B-206ENST00000571995 STAU1O95793 577 aaKnown RBP16.29■□□□□ 0.2
RAB40B-206ENST00000571995 CHEK2O96017 543 aa16.29■□□□□ 0.2
RAB40B-206ENST00000571995 EEF1B2P24534 225 aaKnown RBP16.29■□□□□ 0.2
RAB40B-206ENST00000571995 LRPAP1P30533 357 aa16.29■□□□□ 0.2
RAB40B-206ENST00000571995 CDK18Q07002 472 aa16.29■□□□□ 0.2
RAB40B-206ENST00000571995 TMTC4Q5T4D3 741 aa16.29■□□□□ 0.2
RAB40B-206ENST00000571995 FAM151BQ6UXP7 276 aa16.29■□□□□ 0.2
RAB40B-206ENST00000571995 LRRC8DQ7L1W4 858 aa16.29■□□□□ 0.2
RAB40B-206ENST00000571995 EFCAB1Q9HAE3 211 aa16.29■□□□□ 0.2
RAB40B-206ENST00000571995 MARCH4Q9P2E8 410 aaPredicted RBP16.29■□□□□ 0.2
RAB40B-206ENST00000571995 CDH22Q9UJ99 828 aa16.29■□□□□ 0.2
RAB40B-206ENST00000571995 SHROOM3Q8TF72 1996 aa16.29■□□□□ 0.2
RAB40B-206ENST00000571995 RBM47A0AV96 593 aaKnown RBP16.29■□□□□ 0.2
RAB40B-206ENST00000571995 MATN3O15232 486 aa16.29■□□□□ 0.2
RAB40B-206ENST00000571995 TBL1XO60907 577 aa16.29■□□□□ 0.2
RAB40B-206ENST00000571995 POU4F1Q01851 419 aa16.29■□□□□ 0.2
RAB40B-206ENST00000571995 IMPG1Q17R60 797 aa16.29■□□□□ 0.2
RAB40B-206ENST00000571995 MAP3K21Q5TCX8 1036 aa16.29■□□□□ 0.2
RAB40B-206ENST00000571995 KLHDC9Q8NEP7 349 aa16.29■□□□□ 0.2
RAB40B-206ENST00000571995 DNAJB14Q8TBM8 379 aa16.29■□□□□ 0.2
RAB40B-206ENST00000571995 NMD3Q96D46 503 aaKnown RBP16.29■□□□□ 0.2
RAB40B-206ENST00000571995 VAT1Q99536 393 aa16.29■□□□□ 0.2
RAB40B-206ENST00000571995 CIPCQ9C0C6 399 aa16.29■□□□□ 0.2
RAB40B-206ENST00000571995 OSER1Q9NX31 292 aa16.29■□□□□ 0.2
RAB40B-206ENST00000571995 DONSONQ9NYP3 566 aa16.29■□□□□ 0.2
RAB40B-206ENST00000571995 TRMT6Q9UJA5 497 aaKnown RBP16.29■□□□□ 0.2
RAB40B-206ENST00000571995 MOSPD1Q9UJG1 213 aa16.29■□□□□ 0.2
RAB40B-206ENST00000571995 TCAF1Q9Y4C2 921 aa16.29■□□□□ 0.2
RAB40B-206ENST00000571995 C2orf81A6NN90 581 aa16.29■□□□□ 0.2
RAB40B-206ENST00000571995 PFDN6O15212 129 aa16.29■□□□□ 0.2
RAB40B-206ENST00000571995 TGDSO95455 350 aa16.29■□□□□ 0.2
RAB40B-206ENST00000571995 PBLDP30039 288 aaPredicted RBP16.29■□□□□ 0.2
RAB40B-206ENST00000571995 CORO1AP31146 461 aaKnown RBP16.29■□□□□ 0.2
RAB40B-206ENST00000571995 THEMIS2Q5TEJ8 643 aa16.29■□□□□ 0.2
RAB40B-206ENST00000571995 HECTD2Q5U5R9 776 aa16.29■□□□□ 0.2
RAB40B-206ENST00000571995 CDYL2Q8N8U2 506 aa16.29■□□□□ 0.2
RAB40B-206ENST00000571995 ACMSDQ8TDX5 336 aa16.29■□□□□ 0.2
RAB40B-206ENST00000571995 PTCD3Q96EY7 689 aaKnown RBP16.29■□□□□ 0.2
RAB40B-206ENST00000571995 SLC2A13Q96QE2 648 aa16.29■□□□□ 0.2
RAB40B-206ENST00000571995 KCNA7Q96RP8 456 aa16.29■□□□□ 0.2
RAB40B-206ENST00000571995 RRN3Q9NYV6 651 aa16.29■□□□□ 0.2
RAB40B-206ENST00000571995 CRLS1Q9UJA2 301 aa16.29■□□□□ 0.2
RAB40B-206ENST00000571995 B4GALT3O60512 393 aa16.28■□□□□ 0.2
RAB40B-206ENST00000571995 C1RP00736 705 aa16.28■□□□□ 0.2
RAB40B-206ENST00000571995 GALNT2Q10471 571 aa16.28■□□□□ 0.2
RAB40B-206ENST00000571995 ARL14EPQ8N8R7 260 aaPredicted RBP16.28■□□□□ 0.2
RAB40B-206ENST00000571995 KCTD13Q8WZ19 329 aa16.28■□□□□ 0.2
RAB40B-206ENST00000571995 HIPK3Q9H422 1215 aa16.28■□□□□ 0.2
RAB40B-206ENST00000571995 SF3B1O75533 1304 aaKnown RBP eCLIP16.28■□□□□ 0.2
RAB40B-206ENST00000571995 GNGT2O14610 69 aa16.28■□□□□ 0.2
RAB40B-206ENST00000571995 PSMC3P17980 439 aa16.28■□□□□ 0.2
RAB40B-206ENST00000571995 ARRB2P32121 409 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms