RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 ASNSD1Q9NWL6 643 aa10.53□□□□□ -0.72
CTDNEP1-202ENST00000570380 PPP4R2Q9NY27 417 aa10.53□□□□□ -0.72
CTDNEP1-202ENST00000570380 F8P00451 2351 aa10.52□□□□□ -0.73
CTDNEP1-202ENST00000570380 IGLV3-10A0A075B6K4 115 aa10.52□□□□□ -0.73
CTDNEP1-202ENST00000570380 A0A1B0GVL5 298 aa10.52□□□□□ -0.73
CTDNEP1-202ENST00000570380 TMEM202A6NGA9 273 aa10.52□□□□□ -0.73
CTDNEP1-202ENST00000570380 MKRN2OSH3BPM6 223 aa10.52□□□□□ -0.73
CTDNEP1-202ENST00000570380 POP4O95707 220 aaKnown RBP10.52□□□□□ -0.73
CTDNEP1-202ENST00000570380 GSRP00390 522 aa10.52□□□□□ -0.73
CTDNEP1-202ENST00000570380 PDGFAP04085 211 aa10.52□□□□□ -0.73
CTDNEP1-202ENST00000570380 THRAP10827 490 aa10.52□□□□□ -0.73
CTDNEP1-202ENST00000570380 TIMP2P16035 220 aa10.52□□□□□ -0.73
CTDNEP1-202ENST00000570380 TFE3P19532 575 aaPredicted RBP10.52□□□□□ -0.73
CTDNEP1-202ENST00000570380 TCN2P20062 427 aa10.52□□□□□ -0.73
CTDNEP1-202ENST00000570380 MPSTP25325 297 aa10.52□□□□□ -0.73
CTDNEP1-202ENST00000570380 MAP4P27816 1152 aaKnown RBP10.52□□□□□ -0.73
CTDNEP1-202ENST00000570380 CSTF2P33240 577 aaKnown RBP eCLIP10.52□□□□□ -0.73
CTDNEP1-202ENST00000570380 FMO5P49326 533 aa10.52□□□□□ -0.73
CTDNEP1-202ENST00000570380 CXCR3P49682 368 aa10.52□□□□□ -0.73
CTDNEP1-202ENST00000570380 GNA12Q03113 381 aa10.52□□□□□ -0.73
CTDNEP1-202ENST00000570380 DPYDQ12882 1025 aa10.52□□□□□ -0.73
CTDNEP1-202ENST00000570380 PDCLQ13371 301 aa10.52□□□□□ -0.73
CTDNEP1-202ENST00000570380 TRA2AQ13595 282 aaKnown RBP eCLIP10.52□□□□□ -0.73
CTDNEP1-202ENST00000570380 NR1D2Q14995 579 aa10.52□□□□□ -0.73
CTDNEP1-202ENST00000570380 MEA1Q16626 185 aa10.52□□□□□ -0.73
CTDNEP1-202ENST00000570380 MYLK3Q32MK0 819 aa10.52□□□□□ -0.73
CTDNEP1-202ENST00000570380 TMEM52BQ4KMG9 183 aa10.52□□□□□ -0.73
CTDNEP1-202ENST00000570380 EFHC1Q5JVL4 640 aa10.52□□□□□ -0.73
CTDNEP1-202ENST00000570380 C1QL3Q5VWW1 255 aa10.52□□□□□ -0.73
CTDNEP1-202ENST00000570380 NKAIN2Q5VXU1 208 aa10.52□□□□□ -0.73
CTDNEP1-202ENST00000570380 LRRC31Q6UY01 552 aa10.52□□□□□ -0.73
CTDNEP1-202ENST00000570380 GDPD4Q6W3E5 623 aa10.52□□□□□ -0.73
CTDNEP1-202ENST00000570380 ZNF783Q6ZMS7 281 aa10.52□□□□□ -0.73
CTDNEP1-202ENST00000570380 ARHGEF19Q8IW93 802 aa10.52□□□□□ -0.73
CTDNEP1-202ENST00000570380 BMPERQ8N8U9 685 aa10.52□□□□□ -0.73
CTDNEP1-202ENST00000570380 OR2AP1Q8NGE2 309 aa10.52□□□□□ -0.73
CTDNEP1-202ENST00000570380 ATL2Q8NHH9 583 aa10.52□□□□□ -0.73
CTDNEP1-202ENST00000570380 LMO3Q8TAP4 145 aa10.52□□□□□ -0.73
CTDNEP1-202ENST00000570380 ZNF606Q8WXB4 792 aa10.52□□□□□ -0.73
CTDNEP1-202ENST00000570380 STARD8Q92502 1023 aa10.52□□□□□ -0.73
CTDNEP1-202ENST00000570380 FUBP1Q96AE4 644 aaKnown RBP10.52□□□□□ -0.73
CTDNEP1-202ENST00000570380 RTP4Q96DX8 246 aa10.52□□□□□ -0.73
CTDNEP1-202ENST00000570380 C1orf74Q96LT6 269 aa10.52□□□□□ -0.73
CTDNEP1-202ENST00000570380 KREMEN1Q96MU8 473 aa10.52□□□□□ -0.73
CTDNEP1-202ENST00000570380 EFHD1Q9BUP0 239 aa10.52□□□□□ -0.73
CTDNEP1-202ENST00000570380 OSBPL1AQ9BXW6 950 aa10.52□□□□□ -0.73
CTDNEP1-202ENST00000570380 WDCPQ9H6R7 721 aa10.52□□□□□ -0.73
CTDNEP1-202ENST00000570380 FGF22Q9HCT0 170 aa10.52□□□□□ -0.73
CTDNEP1-202ENST00000570380 CASS4Q9NQ75 786 aa10.52□□□□□ -0.73
CTDNEP1-202ENST00000570380 SPATS2LQ9NUQ6 558 aaKnown RBP10.52□□□□□ -0.73
CTDNEP1-202ENST00000570380 CNTN6Q9UQ52 1028 aa10.52□□□□□ -0.73
CTDNEP1-202ENST00000570380 KCTD3Q9Y597 815 aa10.52□□□□□ -0.73
CTDNEP1-202ENST00000570380 MRPS18BQ9Y676 258 aaKnown RBP10.52□□□□□ -0.73
CTDNEP1-202ENST00000570380 ZFHX3Q15911 3703 aa10.52□□□□□ -0.73
CTDNEP1-202ENST00000570380 WIPF3A6NGB9 483 aa10.51□□□□□ -0.73
CTDNEP1-202ENST00000570380 RHPN2P1A8MT19 583 aa10.51□□□□□ -0.73
CTDNEP1-202ENST00000570380 B4E171 279 aa10.51□□□□□ -0.73
CTDNEP1-202ENST00000570380 SLC16A3O15427 465 aaKnown RBP10.51□□□□□ -0.73
CTDNEP1-202ENST00000570380 SRGAP2O75044 1071 aa10.51□□□□□ -0.73
CTDNEP1-202ENST00000570380 LETM1O95202 739 aaPredicted RBP10.51□□□□□ -0.73
CTDNEP1-202ENST00000570380 PFKFB1P16118 471 aa10.51□□□□□ -0.73
CTDNEP1-202ENST00000570380 CSF2RBP32927 897 aa10.51□□□□□ -0.73
CTDNEP1-202ENST00000570380 ACVRL1P37023 503 aa10.51□□□□□ -0.73
CTDNEP1-202ENST00000570380 TSPAN7P41732 249 aa10.51□□□□□ -0.73
CTDNEP1-202ENST00000570380 RAB15P59190 212 aa10.51□□□□□ -0.73
CTDNEP1-202ENST00000570380 SNRPD1P62314 119 aaKnown RBP10.51□□□□□ -0.73
CTDNEP1-202ENST00000570380 MC1RQ01726 317 aa10.51□□□□□ -0.73
CTDNEP1-202ENST00000570380 ABHD18Q0P651 414 aa10.51□□□□□ -0.73
CTDNEP1-202ENST00000570380 EIF2S3LQ2VIR3 472 aaKnown RBP10.51□□□□□ -0.73
CTDNEP1-202ENST00000570380 BRMS1LQ5PSV4 323 aa10.51□□□□□ -0.73
CTDNEP1-202ENST00000570380 ATXN7L2Q5T6C5 722 aaPredicted RBP10.51□□□□□ -0.73
CTDNEP1-202ENST00000570380 FOXD4L5Q5VV16 416 aaPredicted RBP10.51□□□□□ -0.73
CTDNEP1-202ENST00000570380 FAM129CQ86XR2 697 aa10.51□□□□□ -0.73
CTDNEP1-202ENST00000570380 SMYD4Q8IYR2 804 aaPredicted RBP10.51□□□□□ -0.73
CTDNEP1-202ENST00000570380 NRSN1Q8IZ57 195 aa10.51□□□□□ -0.73
CTDNEP1-202ENST00000570380 WDTC1Q8N5D0 677 aa10.51□□□□□ -0.73
CTDNEP1-202ENST00000570380 PLA2G15Q8NCC3 412 aa10.51□□□□□ -0.73
CTDNEP1-202ENST00000570380 OR4D9Q8NGE8 314 aa10.51□□□□□ -0.73
CTDNEP1-202ENST00000570380 OR56A4Q8NGH8 313 aa10.51□□□□□ -0.73
CTDNEP1-202ENST00000570380 FOXD4L4Q8WXT5 416 aaPredicted RBP10.51□□□□□ -0.73
CTDNEP1-202ENST00000570380 ARHGEF2Q92974 986 aaKnown RBP10.51□□□□□ -0.73
CTDNEP1-202ENST00000570380 CPXM1Q96SM3 734 aa10.51□□□□□ -0.73
CTDNEP1-202ENST00000570380 UPF2Q9HAU5 1272 aaKnown RBP10.51□□□□□ -0.73
CTDNEP1-202ENST00000570380 ACP6Q9NPH0 428 aa10.51□□□□□ -0.73
CTDNEP1-202ENST00000570380 TMEM9Q9P0T7 183 aa10.51□□□□□ -0.73
CTDNEP1-202ENST00000570380 USP25Q9UHP3 1055 aa10.51□□□□□ -0.73
CTDNEP1-202ENST00000570380 TLK1Q9UKI8 766 aa10.51□□□□□ -0.73
CTDNEP1-202ENST00000570380 MAP4K5Q9Y4K4 846 aa10.51□□□□□ -0.73
CTDNEP1-202ENST00000570380 SETD2Q9BYW2 2564 aaPredicted RBP10.51□□□□□ -0.73
CTDNEP1-202ENST00000570380 MED7O43513 233 aa10.5□□□□□ -0.73
CTDNEP1-202ENST00000570380 DAB1O75553 588 aa10.5□□□□□ -0.73
CTDNEP1-202ENST00000570380 PCCBP05166 539 aa10.5□□□□□ -0.73
CTDNEP1-202ENST00000570380 FGF1P05230 155 aa10.5□□□□□ -0.73
CTDNEP1-202ENST00000570380 FURINP09958 794 aa10.5□□□□□ -0.73
CTDNEP1-202ENST00000570380 KRT5P13647 590 aa10.5□□□□□ -0.73
CTDNEP1-202ENST00000570380 BMP6P22004 513 aa10.5□□□□□ -0.73
CTDNEP1-202ENST00000570380 F8A1P23610 371 aa10.5□□□□□ -0.73
CTDNEP1-202ENST00000570380 GCNT1Q02742 428 aa10.5□□□□□ -0.73
CTDNEP1-202ENST00000570380 MTM1Q13496 603 aa10.5□□□□□ -0.73
CTDNEP1-202ENST00000570380 SQSTM1Q13501 440 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms