RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 RALGPS1Q5JS13 557 aa13.12□□□□□ -0.31
CNOT1-220ENST00000569916 SLC9A4Q6AI14 798 aa13.12□□□□□ -0.31
CNOT1-220ENST00000569916 ALG1LQ6GMV1 187 aa13.12□□□□□ -0.31
CNOT1-220ENST00000569916 TIGD7Q6NT04 549 aaPredicted RBP13.12□□□□□ -0.31
CNOT1-220ENST00000569916 DPPA4Q7L190 304 aa13.12□□□□□ -0.31
CNOT1-220ENST00000569916 RAB44Q7Z6P3 723 aaPredicted RBP13.12□□□□□ -0.31
CNOT1-220ENST00000569916 SLCO6A1Q86UG4 719 aa13.12□□□□□ -0.31
CNOT1-220ENST00000569916 RHOT1Q8IXI2 618 aa13.12□□□□□ -0.31
CNOT1-220ENST00000569916 EID2Q8N6I1 236 aa13.12□□□□□ -0.31
CNOT1-220ENST00000569916 PLD5Q8N7P1 536 aa13.12□□□□□ -0.31
CNOT1-220ENST00000569916 PNPLA1Q8N8W4 532 aa13.12□□□□□ -0.31
CNOT1-220ENST00000569916 LRRN4Q8WUT4 740 aa13.12□□□□□ -0.31
CNOT1-220ENST00000569916 ADAMTS14Q8WXS8 1223 aa13.12□□□□□ -0.31
CNOT1-220ENST00000569916 FATE1Q969F0 183 aa13.12□□□□□ -0.31
CNOT1-220ENST00000569916 HDAC11Q96DB2 347 aa13.12□□□□□ -0.31
CNOT1-220ENST00000569916 IFT43Q96FT9 208 aa13.12□□□□□ -0.31
CNOT1-220ENST00000569916 CNTNAP3BQ96NU0 1288 aa13.12□□□□□ -0.31
CNOT1-220ENST00000569916 TSGA13Q96PP4 275 aa13.12□□□□□ -0.31
CNOT1-220ENST00000569916 SCNM1Q9BWG6 230 aa13.12□□□□□ -0.31
CNOT1-220ENST00000569916 C1QTNF7Q9BXJ2 289 aa13.12□□□□□ -0.31
CNOT1-220ENST00000569916 CNTNAP3Q9BZ76 1288 aa13.12□□□□□ -0.31
CNOT1-220ENST00000569916 GOLPH3Q9H4A6 298 aa13.12□□□□□ -0.31
CNOT1-220ENST00000569916 NOD2Q9HC29 1040 aa13.12□□□□□ -0.31
CNOT1-220ENST00000569916 NT5MQ9NPB1 228 aa13.12□□□□□ -0.31
CNOT1-220ENST00000569916 MBNL1Q9NR56 388 aaKnown RBP13.12□□□□□ -0.31
CNOT1-220ENST00000569916 DTLQ9NZJ0 730 aa13.12□□□□□ -0.31
CNOT1-220ENST00000569916 FTSJ1Q9UET6 329 aa13.12□□□□□ -0.31
CNOT1-220ENST00000569916 APOBEC2Q9Y235 224 aaKnown RBP13.12□□□□□ -0.31
CNOT1-220ENST00000569916 PCDHGC4Q9Y5F7 938 aa13.12□□□□□ -0.31
CNOT1-220ENST00000569916 PLXNB3Q9ULL4 1909 aa13.11□□□□□ -0.31
CNOT1-220ENST00000569916 A0A0A6YYK5 440 aaPredicted RBP13.11□□□□□ -0.31
CNOT1-220ENST00000569916 SPTY2D1-AS1A0A0U1RR47 76 aa13.11□□□□□ -0.31
CNOT1-220ENST00000569916 SPOPO43791 374 aa13.11□□□□□ -0.31
CNOT1-220ENST00000569916 PIAS2O75928 621 aa13.11□□□□□ -0.31
CNOT1-220ENST00000569916 NDUFA10O95299 355 aa13.11□□□□□ -0.31
CNOT1-220ENST00000569916 CPP00450 1065 aa13.11□□□□□ -0.31
CNOT1-220ENST00000569916 MX2P20592 715 aa13.11□□□□□ -0.31
CNOT1-220ENST00000569916 CCNCP24863 283 aa13.11□□□□□ -0.31
CNOT1-220ENST00000569916 NOP2P46087 812 aaKnown RBP13.11□□□□□ -0.31
CNOT1-220ENST00000569916 LIG3P49916 1009 aa13.11□□□□□ -0.31
CNOT1-220ENST00000569916 POLR2LP62875 67 aaKnown RBP13.11□□□□□ -0.31
CNOT1-220ENST00000569916 PDE1CQ14123 709 aaPredicted RBP13.11□□□□□ -0.31
CNOT1-220ENST00000569916 AGERQ15109 404 aa13.11□□□□□ -0.31
CNOT1-220ENST00000569916 SPA17Q15506 151 aa13.11□□□□□ -0.31
CNOT1-220ENST00000569916 RAD9BQ6WBX8 426 aa13.11□□□□□ -0.31
CNOT1-220ENST00000569916 PARGQ86W56 976 aa13.11□□□□□ -0.31
CNOT1-220ENST00000569916 TMTC1Q8IUR5 882 aa13.11□□□□□ -0.31
CNOT1-220ENST00000569916 SLC25A45Q8N413 288 aa13.11□□□□□ -0.31
CNOT1-220ENST00000569916 CHCHD4Q8N4Q1 142 aa13.11□□□□□ -0.31
CNOT1-220ENST00000569916 PAF1Q8N7H5 531 aa13.11□□□□□ -0.31
CNOT1-220ENST00000569916 RNF25Q96BH1 459 aaPredicted RBP13.11□□□□□ -0.31
CNOT1-220ENST00000569916 POLR1EQ9GZS1 481 aaKnown RBP13.11□□□□□ -0.31
CNOT1-220ENST00000569916 UCKL1Q9NWZ5 548 aa13.11□□□□□ -0.31
CNOT1-220ENST00000569916 DDX56Q9NY93 547 aaKnown RBP13.11□□□□□ -0.31
CNOT1-220ENST00000569916 KLK13Q9UKR3 277 aa13.11□□□□□ -0.31
CNOT1-220ENST00000569916 REXO2Q9Y3B8 237 aaKnown RBP13.11□□□□□ -0.31
CNOT1-220ENST00000569916 ALG6Q9Y672 507 aa13.11□□□□□ -0.31
CNOT1-220ENST00000569916 EPN1Q9Y6I3 576 aaPredicted RBP13.11□□□□□ -0.31
CNOT1-220ENST00000569916 ARID1BQ8NFD5 2236 aaPredicted RBP13.11□□□□□ -0.31
CNOT1-220ENST00000569916 A0A1W2PQ67 120 aa13.1□□□□□ -0.31
CNOT1-220ENST00000569916 CFAP69A5D8W1 941 aa13.1□□□□□ -0.31
CNOT1-220ENST00000569916 RCCD1A6NED2 376 aa13.1□□□□□ -0.31
CNOT1-220ENST00000569916 APOL1O14791 398 aa13.1□□□□□ -0.31
CNOT1-220ENST00000569916 PSTPIP1O43586 416 aa13.1□□□□□ -0.31
CNOT1-220ENST00000569916 ELFN1P0C7U0 828 aa13.1□□□□□ -0.31
CNOT1-220ENST00000569916 GIMD1P0DJR0 217 aa13.1□□□□□ -0.31
CNOT1-220ENST00000569916 TNNT1P13805 278 aa13.1□□□□□ -0.31
CNOT1-220ENST00000569916 NME1P15531 152 aaKnown RBP13.1□□□□□ -0.31
CNOT1-220ENST00000569916 GM2AP17900 193 aa13.1□□□□□ -0.31
CNOT1-220ENST00000569916 DGKAP23743 735 aa13.1□□□□□ -0.31
CNOT1-220ENST00000569916 YPEL5P62699 121 aa13.1□□□□□ -0.31
CNOT1-220ENST00000569916 PPIDQ08752 370 aaKnown RBP13.1□□□□□ -0.31
CNOT1-220ENST00000569916 IHHQ14623 411 aa13.1□□□□□ -0.31
CNOT1-220ENST00000569916 LRRC14Q15048 493 aa13.1□□□□□ -0.31
CNOT1-220ENST00000569916 WSCD2Q2TBF2 565 aa13.1□□□□□ -0.31
CNOT1-220ENST00000569916 ZNF542PQ5EBM4 170 aa13.1□□□□□ -0.31
CNOT1-220ENST00000569916 C11orf63Q6NUN7 778 aa13.1□□□□□ -0.31
CNOT1-220ENST00000569916 MFSD7Q6UXD7 560 aa13.1□□□□□ -0.31
CNOT1-220ENST00000569916 LIPIQ6XZB0 460 aa13.1□□□□□ -0.31
CNOT1-220ENST00000569916 TMEM139Q8IV31 216 aa13.1□□□□□ -0.31
CNOT1-220ENST00000569916 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.1□□□□□ -0.31
CNOT1-220ENST00000569916 PDCD6IPQ8WUM4 868 aaKnown RBP13.1□□□□□ -0.31
CNOT1-220ENST00000569916 CNDP2Q96KP4 475 aaKnown RBP13.1□□□□□ -0.31
CNOT1-220ENST00000569916 SEMA3CQ99985 751 aa13.1□□□□□ -0.31
CNOT1-220ENST00000569916 ANP32EQ9BTT0 268 aa13.1□□□□□ -0.31
CNOT1-220ENST00000569916 LUC7LQ9NQ29 371 aaKnown RBP13.1□□□□□ -0.31
CNOT1-220ENST00000569916 RBM22Q9NW64 420 aaKnown RBP eCLIP13.1□□□□□ -0.31
CNOT1-220ENST00000569916 DNAJC28Q9NX36 388 aa13.1□□□□□ -0.31
CNOT1-220ENST00000569916 B4GALT6Q9UBX8 382 aa13.1□□□□□ -0.31
CNOT1-220ENST00000569916 AMACRQ9UHK6 382 aa13.1□□□□□ -0.31
CNOT1-220ENST00000569916 KLF15Q9UIH9 416 aa13.1□□□□□ -0.31
CNOT1-220ENST00000569916 SALL4Q9UJQ4 1053 aa13.1□□□□□ -0.31
CNOT1-220ENST00000569916 NEUROG3Q9Y4Z2 214 aa13.1□□□□□ -0.31
CNOT1-220ENST00000569916 HEY1Q9Y5J3 304 aa13.1□□□□□ -0.31
CNOT1-220ENST00000569916 SPEGQ15772 3267 aa13.09□□□□□ -0.31
CNOT1-220ENST00000569916 GOLGA8CPA6NN73 597 aa13.09□□□□□ -0.31
CNOT1-220ENST00000569916 TRIM38O00635 465 aa13.09□□□□□ -0.31
CNOT1-220ENST00000569916 TOR1BO14657 336 aa13.09□□□□□ -0.31
CNOT1-220ENST00000569916 ENC1O14682 589 aa13.09□□□□□ -0.31
CNOT1-220ENST00000569916 LZTS3O60299 673 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms