RNA–Protein interactions for RNA: ENST00000569895.3

RBFOX1-219, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-219ENST00000569895 SEPT3Q9UH03 358 aa22.71■■□□□ 1.23
RBFOX1-219ENST00000569895 DOLKQ9UPQ8 538 aa22.71■■□□□ 1.23
RBFOX1-219ENST00000569895 COQ6Q9Y2Z9 468 aa22.71■■□□□ 1.23
RBFOX1-219ENST00000569895 U3KQA8 63 aa22.71■■□□□ 1.23
RBFOX1-219ENST00000569895 ANKRD11Q6UB99 2663 aaPredicted RBP22.7■■□□□ 1.22
RBFOX1-219ENST00000569895 EME2A4GXA9 379 aaPredicted RBP22.7■■□□□ 1.22
RBFOX1-219ENST00000569895 LMO7DNF2Z398 122 aa22.7■■□□□ 1.22
RBFOX1-219ENST00000569895 EIF2S3P41091 472 aaKnown RBP22.7■■□□□ 1.22
RBFOX1-219ENST00000569895 SCNN1BP51168 640 aa22.7■■□□□ 1.22
RBFOX1-219ENST00000569895 UBASH3AP57075 661 aa22.7■■□□□ 1.22
RBFOX1-219ENST00000569895 AP1S1P61966 158 aa22.7■■□□□ 1.22
RBFOX1-219ENST00000569895 FANCCQ00597 558 aa22.7■■□□□ 1.22
RBFOX1-219ENST00000569895 DPYSQ14117 519 aa22.7■■□□□ 1.22
RBFOX1-219ENST00000569895 ELOCQ15369 112 aa22.7■■□□□ 1.22
RBFOX1-219ENST00000569895 WSCD2Q2TBF2 565 aa22.7■■□□□ 1.22
RBFOX1-219ENST00000569895 ESRP1Q6NXG1 681 aaKnown RBP22.7■■□□□ 1.22
RBFOX1-219ENST00000569895 CYP4V2Q6ZWL3 525 aaPredicted RBP22.7■■□□□ 1.22
RBFOX1-219ENST00000569895 RBFAQ8N0V3 343 aa22.7■■□□□ 1.22
RBFOX1-219ENST00000569895 SDR16C5Q8N3Y7 309 aa22.7■■□□□ 1.22
RBFOX1-219ENST00000569895 NAT6Q93015 286 aa22.7■■□□□ 1.22
RBFOX1-219ENST00000569895 GRAMD1AQ96CP6 724 aa22.7■■□□□ 1.22
RBFOX1-219ENST00000569895 ADAMTS20P59510 1910 aa22.7■■□□□ 1.22
RBFOX1-219ENST00000569895 ACACAQ13085 2346 aa22.69■■□□□ 1.22
RBFOX1-219ENST00000569895 URB1O60287 2271 aaKnown RBP22.69■■□□□ 1.22
RBFOX1-219ENST00000569895 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.69■■□□□ 1.22
RBFOX1-219ENST00000569895 GOLGA6L19H0YKK7 550 aa22.69■■□□□ 1.22
RBFOX1-219ENST00000569895 BRINP1O60477 761 aa22.69■■□□□ 1.22
RBFOX1-219ENST00000569895 GCATO75600 419 aa22.69■■□□□ 1.22
RBFOX1-219ENST00000569895 ALPIP09923 528 aa22.69■■□□□ 1.22
RBFOX1-219ENST00000569895 CTSEP14091 401 aa22.69■■□□□ 1.22
RBFOX1-219ENST00000569895 MMP12P39900 470 aa22.69■■□□□ 1.22
RBFOX1-219ENST00000569895 C1orf61Q13536 156 aa22.69■■□□□ 1.22
RBFOX1-219ENST00000569895 INPP5AQ14642 412 aa22.69■■□□□ 1.22
RBFOX1-219ENST00000569895 LBRQ14739 615 aaKnown RBP22.69■■□□□ 1.22
RBFOX1-219ENST00000569895 DPYSL2Q16555 572 aa22.69■■□□□ 1.22
RBFOX1-219ENST00000569895 LVRNQ6Q4G3 990 aa22.69■■□□□ 1.22
RBFOX1-219ENST00000569895 TMCO3Q6UWJ1 677 aa22.69■■□□□ 1.22
RBFOX1-219ENST00000569895 EFL1Q7Z2Z2 1120 aaKnown RBP22.69■■□□□ 1.22
RBFOX1-219ENST00000569895 BBS5Q8N3I7 341 aa22.69■■□□□ 1.22
RBFOX1-219ENST00000569895 NPWQ8N729 165 aa22.69■■□□□ 1.22
RBFOX1-219ENST00000569895 SNIP1Q8TAD8 396 aaKnown RBP22.69■■□□□ 1.22
RBFOX1-219ENST00000569895 PSKH2Q96QS6 385 aa22.69■■□□□ 1.22
RBFOX1-219ENST00000569895 APOOQ9BUR5 198 aa22.69■■□□□ 1.22
RBFOX1-219ENST00000569895 LRRC61Q9BV99 259 aa22.69■■□□□ 1.22
RBFOX1-219ENST00000569895 BOCQ9BWV1 1114 aa22.69■■□□□ 1.22
RBFOX1-219ENST00000569895 CBX8Q9HC52 389 aa22.69■■□□□ 1.22
RBFOX1-219ENST00000569895 TDRD6O60522 2096 aaKnown RBP22.69■■□□□ 1.22
RBFOX1-219ENST00000569895 A0A1W2PQ67 120 aa22.68■■□□□ 1.22
RBFOX1-219ENST00000569895 SYCE3A1L190 88 aa22.68■■□□□ 1.22
RBFOX1-219ENST00000569895 YY2O15391 372 aa22.68■■□□□ 1.22
RBFOX1-219ENST00000569895 CSO75390 466 aaKnown RBP22.68■■□□□ 1.22
RBFOX1-219ENST00000569895 RASGRP1O95267 797 aa22.68■■□□□ 1.22
RBFOX1-219ENST00000569895 SERPING1P05155 500 aa22.68■■□□□ 1.22
RBFOX1-219ENST00000569895 TSHRP16473 764 aa22.68■■□□□ 1.22
RBFOX1-219ENST00000569895 NFKBIAP25963 317 aa22.68■■□□□ 1.22
RBFOX1-219ENST00000569895 HSPA9P38646 679 aaKnown RBP22.68■■□□□ 1.22
RBFOX1-219ENST00000569895 RGRP47804 291 aa22.68■■□□□ 1.22
RBFOX1-219ENST00000569895 HK3P52790 923 aa22.68■■□□□ 1.22
RBFOX1-219ENST00000569895 MTM1Q13496 603 aa22.68■■□□□ 1.22
RBFOX1-219ENST00000569895 NFATC4Q14934 902 aa22.68■■□□□ 1.22
RBFOX1-219ENST00000569895 C6orf132Q5T0Z8 1188 aa22.68■■□□□ 1.22
RBFOX1-219ENST00000569895 ENPP7Q6UWV6 458 aa22.68■■□□□ 1.22
RBFOX1-219ENST00000569895 ARHGAP36Q6ZRI8 547 aa22.68■■□□□ 1.22
RBFOX1-219ENST00000569895 LUZP1Q86V48 1076 aa22.68■■□□□ 1.22
RBFOX1-219ENST00000569895 HID1Q8IV36 788 aa22.68■■□□□ 1.22
RBFOX1-219ENST00000569895 WDR48Q8TAF3 677 aa22.68■■□□□ 1.22
RBFOX1-219ENST00000569895 NSMCE1Q8WV22 266 aa22.68■■□□□ 1.22
RBFOX1-219ENST00000569895 HSPH1Q92598 858 aa22.68■■□□□ 1.22
RBFOX1-219ENST00000569895 ECHDC3Q96DC8 303 aa22.68■■□□□ 1.22
RBFOX1-219ENST00000569895 TCEAL2Q9H3H9 227 aaPredicted RBP22.68■■□□□ 1.22
RBFOX1-219ENST00000569895 IP6K2Q9UHH9 426 aa22.68■■□□□ 1.22
RBFOX1-219ENST00000569895 DSPP15924 2871 aaKnown RBP22.68■■□□□ 1.22
RBFOX1-219ENST00000569895 APC2O95996 2303 aa22.67■■□□□ 1.22
RBFOX1-219ENST00000569895 TLX3O43711 291 aaPredicted RBP22.67■■□□□ 1.22
RBFOX1-219ENST00000569895 USP12O75317 370 aa22.67■■□□□ 1.22
RBFOX1-219ENST00000569895 IL1R2P27930 398 aa22.67■■□□□ 1.22
RBFOX1-219ENST00000569895 ZBED6P86452 979 aa22.67■■□□□ 1.22
RBFOX1-219ENST00000569895 ZNF235Q14590 738 aa22.67■■□□□ 1.22
RBFOX1-219ENST00000569895 SMTNL2Q2TAL5 461 aa22.67■■□□□ 1.22
RBFOX1-219ENST00000569895 TBC1D25Q3MII6 688 aa22.67■■□□□ 1.22
RBFOX1-219ENST00000569895 HGSNATQ68CP4 663 aa22.67■■□□□ 1.22
RBFOX1-219ENST00000569895 GUSBP11Q6P575 273 aa22.67■■□□□ 1.22
RBFOX1-219ENST00000569895 POLNQ7Z5Q5 900 aa22.67■■□□□ 1.22
RBFOX1-219ENST00000569895 TEKT4Q8WW24 435 aa22.67■■□□□ 1.22
RBFOX1-219ENST00000569895 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.67■■□□□ 1.22
RBFOX1-219ENST00000569895 PCDHB1Q9Y5F3 818 aa22.67■■□□□ 1.22
RBFOX1-219ENST00000569895 MUSKO15146 869 aa22.66■■□□□ 1.22
RBFOX1-219ENST00000569895 TNFP01375 233 aa22.66■■□□□ 1.22
RBFOX1-219ENST00000569895 PCCBP05166 539 aa22.66■■□□□ 1.22
RBFOX1-219ENST00000569895 ELFN1P0C7U0 828 aa22.66■■□□□ 1.22
RBFOX1-219ENST00000569895 AMPD1P23109 780 aa22.66■■□□□ 1.22
RBFOX1-219ENST00000569895 SERPINB6P35237 376 aa22.66■■□□□ 1.22
RBFOX1-219ENST00000569895 SRP54P61011 504 aaKnown RBP22.66■■□□□ 1.22
RBFOX1-219ENST00000569895 NFKBIBQ15653 356 aa22.66■■□□□ 1.22
RBFOX1-219ENST00000569895 RD3Q7Z3Z2 195 aa22.66■■□□□ 1.22
RBFOX1-219ENST00000569895 ZSWIM9Q86XI8 627 aa22.66■■□□□ 1.22
RBFOX1-219ENST00000569895 GKN2Q86XP6 184 aa22.66■■□□□ 1.22
RBFOX1-219ENST00000569895 NIPA2Q8N8Q9 360 aa22.66■■□□□ 1.22
RBFOX1-219ENST00000569895 CPLX3Q8WVH0 158 aa22.66■■□□□ 1.22
RBFOX1-219ENST00000569895 TSACCQ96A04 125 aaPredicted RBP22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms