RNA–Protein interactions for RNA: ENST00000569882.1

CNOT1-219, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-219ENST00000569882 CYP4F12Q9HCS2 524 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 PARD6AQ9NPB6 346 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 CD93Q9NPY3 652 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 TMEM248Q9NWD8 314 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 GPATCH2LQ9NWQ4 482 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 WSB2Q9NYS7 404 aaPredicted RBP4.91□□□□□ -1.62
CNOT1-219ENST00000569882 TAS2R14Q9NYV8 317 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 USP36Q9P275 1121 aaKnown RBP4.91□□□□□ -1.62
CNOT1-219ENST00000569882 IL36AQ9UHA7 158 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 LCMT1Q9UIC8 334 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 VPS51Q9UID3 782 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 MBD1Q9UIS9 605 aaPredicted RBP4.91□□□□□ -1.62
CNOT1-219ENST00000569882 PILRBQ9UKJ0 227 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 INTS6Q9UL03 887 aaKnown RBP4.91□□□□□ -1.62
CNOT1-219ENST00000569882 FZD4Q9ULV1 537 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 TPX2Q9ULW0 747 aaKnown RBP4.91□□□□□ -1.62
CNOT1-219ENST00000569882 TBC1D30Q9Y2I9 924 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 HIF3AQ9Y2N7 669 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 TTLL3Q9Y4R7 772 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 TP53BP1Q12888 1972 aaPredicted RBP4.91□□□□□ -1.62
CNOT1-219ENST00000569882 GVINP1Q7Z2Y8 2422 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 TTC36A6NLP5 189 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 DDX3XO00571 662 aaKnown RBP eCLIP4.9□□□□□ -1.63
CNOT1-219ENST00000569882 SLC30A4O14863 429 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 MCF2LO15068 1137 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 SLC7A4O43246 635 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 NDUFB5O43674 189 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 SPOPO43791 374 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 NRDCO43847 1150 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 MAGEC1O60732 1142 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 PALMO75781 387 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 GYPCP04921 128 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 SRCP12931 536 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 TNNT1P13805 278 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 VAV1P15498 845 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 SPINK2P20155 84 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 NFKBIAP25963 317 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 MIPP30301 263 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 MAT2AP31153 395 aaKnown RBP4.9□□□□□ -1.63
CNOT1-219ENST00000569882 CHRNA3P32297 505 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 CYLC1P35663 651 aaPredicted RBP4.9□□□□□ -1.63
CNOT1-219ENST00000569882 ACVRL1P37023 503 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 EIF4A3P38919 411 aaKnown RBP4.9□□□□□ -1.63
CNOT1-219ENST00000569882 TNNT3P45378 269 aaPredicted RBP4.9□□□□□ -1.63
CNOT1-219ENST00000569882 NOP2P46087 812 aaKnown RBP4.9□□□□□ -1.63
CNOT1-219ENST00000569882 ARRB1P49407 418 aaPredicted RBP4.9□□□□□ -1.63
CNOT1-219ENST00000569882 CCNHP51946 323 aaPredicted RBP4.9□□□□□ -1.63
CNOT1-219ENST00000569882 NEK3P51956 506 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 ZNF135P52742 658 aaPredicted RBP4.9□□□□□ -1.63
CNOT1-219ENST00000569882 ADKP55263 362 aaKnown RBP4.9□□□□□ -1.63
CNOT1-219ENST00000569882 YBEYP58557 167 aaPredicted RBP4.9□□□□□ -1.63
CNOT1-219ENST00000569882 SCAPQ12770 1279 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 PTP4A2Q12974 167 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 SGCGQ13326 291 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 ENPP2Q13822 863 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 ZNF235Q14590 738 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 STAT4Q14765 748 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 ACAP1Q15027 740 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 PARP15Q460N3 678 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 SETMARQ53H47 684 aaPredicted RBP4.9□□□□□ -1.63
CNOT1-219ENST00000569882 BOLA3Q53S33 107 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 CCDC157Q569K6 752 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 CARD16Q5EG05 197 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 C9orf64Q5T6V5 341 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 OTUD1Q5VV17 481 aaPredicted RBP4.9□□□□□ -1.63
CNOT1-219ENST00000569882 PLEKHA7Q6IQ23 1121 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 TRNP1Q6NT89 227 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 SLC23A3Q6PIS1 610 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 TMCO3Q6UWJ1 677 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 LEKR1Q6ZMV7 388 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 RINLQ6ZS11 566 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 KIAA0907Q7Z7F0 614 aaPredicted RBP4.9□□□□□ -1.63
CNOT1-219ENST00000569882 DNAAF5Q86Y56 855 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 SLC41A1Q8IVJ1 513 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 MAP7D3Q8IWC1 876 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 PYROXD2Q8N2H3 581 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 MINDY1Q8N5J2 469 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 ATPAF2Q8N5M1 289 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 KCTD6Q8NC69 237 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 OR6K2Q8NGY2 324 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 FNIP1Q8TF40 1166 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 PTPRN2Q92932 1015 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 BIRC7Q96CA5 298 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 ARHGEF26Q96DR7 871 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 P2RY11Q96G91 374 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 ZNF419Q96HQ0 510 aaPredicted RBP4.9□□□□□ -1.63
CNOT1-219ENST00000569882 CELF6Q96J87 481 aaKnown RBP4.9□□□□□ -1.63
CNOT1-219ENST00000569882 MRGPRX3Q96LB0 322 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 MYOCQ99972 504 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 HEPHQ9BQS7 1158 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 TRIM56Q9BRZ2 755 aaKnown RBP4.9□□□□□ -1.63
CNOT1-219ENST00000569882 SNRNP25Q9BV90 132 aaKnown RBP4.9□□□□□ -1.63
CNOT1-219ENST00000569882 C1QTNF7Q9BXJ2 289 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 OSBPL1AQ9BXW6 950 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 MAK16Q9BXY0 300 aaKnown RBP4.9□□□□□ -1.63
CNOT1-219ENST00000569882 CEP44Q9C0F1 390 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 NEUROG2Q9H2A3 272 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 C6orf106Q9H6K1 298 aaPredicted RBP4.9□□□□□ -1.63
CNOT1-219ENST00000569882 GAREM1Q9H706 876 aa4.9□□□□□ -1.63
CNOT1-219ENST00000569882 FSCN3Q9NQT6 498 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms