RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 DPH1Q9BZG8 443 aa13.25□□□□□ -0.29
SPG7-221ENST00000569720 EDEM3Q9BZQ6 932 aa13.25□□□□□ -0.29
SPG7-221ENST00000569720 TCEAL2Q9H3H9 227 aaPredicted RBP13.25□□□□□ -0.29
SPG7-221ENST00000569720 SUV39H2Q9H5I1 410 aa13.25□□□□□ -0.29
SPG7-221ENST00000569720 GRPEL1Q9HAV7 217 aa13.25□□□□□ -0.29
SPG7-221ENST00000569720 MBNL1Q9NR56 388 aaKnown RBP13.25□□□□□ -0.29
SPG7-221ENST00000569720 COL27A1Q8IZC6 1860 aaPredicted RBP13.25□□□□□ -0.29
SPG7-221ENST00000569720 KALRNO60229 2985 aa13.24□□□□□ -0.29
SPG7-221ENST00000569720 TCRBV5S1A1TA0A578 114 aa13.24□□□□□ -0.29
SPG7-221ENST00000569720 ARHGAP42A6NI28 874 aa13.24□□□□□ -0.29
SPG7-221ENST00000569720 EIF3CLB5ME19 914 aaKnown RBP13.24□□□□□ -0.29
SPG7-221ENST00000569720 YY2O15391 372 aa13.24□□□□□ -0.29
SPG7-221ENST00000569720 INSIG1O15503 277 aa13.24□□□□□ -0.29
SPG7-221ENST00000569720 DAPK3O43293 454 aa13.24□□□□□ -0.29
SPG7-221ENST00000569720 PIGNO95427 931 aa13.24□□□□□ -0.29
SPG7-221ENST00000569720 ATP1A3P13637 1013 aa13.24□□□□□ -0.29
SPG7-221ENST00000569720 ITIH2P19823 946 aa13.24□□□□□ -0.29
SPG7-221ENST00000569720 TNFAIP3P21580 790 aa13.24□□□□□ -0.29
SPG7-221ENST00000569720 NDST2P52849 883 aa13.24□□□□□ -0.29
SPG7-221ENST00000569720 SPIDRQ14159 915 aa13.24□□□□□ -0.29
SPG7-221ENST00000569720 UGP2Q16851 508 aa13.24□□□□□ -0.29
SPG7-221ENST00000569720 PERM1Q5SV97 790 aa13.24□□□□□ -0.29
SPG7-221ENST00000569720 PPP1R15BQ5SWA1 713 aa13.24□□□□□ -0.29
SPG7-221ENST00000569720 LVRNQ6Q4G3 990 aa13.24□□□□□ -0.29
SPG7-221ENST00000569720 CRTC1Q6UUV9 634 aa13.24□□□□□ -0.29
SPG7-221ENST00000569720 APTXQ7Z2E3 356 aaKnown RBP13.24□□□□□ -0.29
SPG7-221ENST00000569720 HID1Q8IV36 788 aa13.24□□□□□ -0.29
SPG7-221ENST00000569720 SDR16C5Q8N3Y7 309 aa13.24□□□□□ -0.29
SPG7-221ENST00000569720 PAF1Q8N7H5 531 aa13.24□□□□□ -0.29
SPG7-221ENST00000569720 CCDC97Q96F63 343 aaPredicted RBP13.24□□□□□ -0.29
SPG7-221ENST00000569720 ATXN7L3BQ96GX2 97 aa13.24□□□□□ -0.29
SPG7-221ENST00000569720 VCPIP1Q96JH7 1222 aa13.24□□□□□ -0.29
SPG7-221ENST00000569720 TUBGCP5Q96RT8 1024 aa13.24□□□□□ -0.29
SPG7-221ENST00000569720 EIF3CQ99613 913 aaKnown RBP13.24□□□□□ -0.29
SPG7-221ENST00000569720 CCDC3Q9BQI4 270 aa13.24□□□□□ -0.29
SPG7-221ENST00000569720 TRIM5Q9C035 493 aa13.24□□□□□ -0.29
SPG7-221ENST00000569720 SYNDIG1Q9H7V2 258 aa13.24□□□□□ -0.29
SPG7-221ENST00000569720 ASCL3Q9NQ33 180 aa13.24□□□□□ -0.29
SPG7-221ENST00000569720 PARVAQ9NVD7 372 aa13.24□□□□□ -0.29
SPG7-221ENST00000569720 PADI4Q9UM07 663 aa13.24□□□□□ -0.29
SPG7-221ENST00000569720 AP4E1Q9UPM8 1137 aa13.24□□□□□ -0.29
SPG7-221ENST00000569720 SATB2Q9UPW6 733 aa13.24□□□□□ -0.29
SPG7-221ENST00000569720 COQ6Q9Y2Z9 468 aa13.24□□□□□ -0.29
SPG7-221ENST00000569720 ENTPD2Q9Y5L3 495 aa13.24□□□□□ -0.29
SPG7-221ENST00000569720 KIF26BQ2KJY2 2108 aa13.24□□□□□ -0.29
SPG7-221ENST00000569720 LRP4O75096 1905 aa13.23□□□□□ -0.29
SPG7-221ENST00000569720 TSPAN11A1L157 253 aa13.23□□□□□ -0.29
SPG7-221ENST00000569720 EEF2KO00418 725 aaKnown RBP13.23□□□□□ -0.29
SPG7-221ENST00000569720 KLK10O43240 276 aa13.23□□□□□ -0.29
SPG7-221ENST00000569720 PRAMEF11O60813 436 aa13.23□□□□□ -0.29
SPG7-221ENST00000569720 RASGRP1O95267 797 aa13.23□□□□□ -0.29
SPG7-221ENST00000569720 PRB1P04280 392 aa13.23□□□□□ -0.29
SPG7-221ENST00000569720 C6P13671 934 aa13.23□□□□□ -0.29
SPG7-221ENST00000569720 PSMA2P25787 234 aa13.23□□□□□ -0.29
SPG7-221ENST00000569720 SERPINA4P29622 427 aa13.23□□□□□ -0.29
SPG7-221ENST00000569720 HK3P52790 923 aa13.23□□□□□ -0.29
SPG7-221ENST00000569720 TRIM14Q14142 442 aa13.23□□□□□ -0.29
SPG7-221ENST00000569720 FIGNQ5HY92 759 aa13.23□□□□□ -0.29
SPG7-221ENST00000569720 FOXR1Q6PIV2 292 aa13.23□□□□□ -0.29
SPG7-221ENST00000569720 ENPP7Q6UWV6 458 aa13.23□□□□□ -0.29
SPG7-221ENST00000569720 RD3Q7Z3Z2 195 aa13.23□□□□□ -0.29
SPG7-221ENST00000569720 GKN2Q86XP6 184 aa13.23□□□□□ -0.29
SPG7-221ENST00000569720 ARL14Q8N4G2 192 aa13.23□□□□□ -0.29
SPG7-221ENST00000569720 WDR36Q8NI36 951 aaKnown RBP13.23□□□□□ -0.29
SPG7-221ENST00000569720 SLC46A1Q96NT5 459 aa13.23□□□□□ -0.29
SPG7-221ENST00000569720 APOOQ9BUR5 198 aa13.23□□□□□ -0.29
SPG7-221ENST00000569720 CLPBQ9H078 707 aa13.23□□□□□ -0.29
SPG7-221ENST00000569720 DHX35Q9H5Z1 703 aaKnown RBP13.23□□□□□ -0.29
SPG7-221ENST00000569720 LRRC19Q9H756 370 aa13.23□□□□□ -0.29
SPG7-221ENST00000569720 ATP13A3Q9H7F0 1226 aa13.23□□□□□ -0.29
SPG7-221ENST00000569720 PDFQ9HBH1 243 aa13.23□□□□□ -0.29
SPG7-221ENST00000569720 PCDH12Q9NPG4 1184 aa13.23□□□□□ -0.29
SPG7-221ENST00000569720 GULP1Q9UBP9 304 aa13.23□□□□□ -0.29
SPG7-221ENST00000569720 PNMA8BQ9ULN7 279 aaPredicted RBP13.23□□□□□ -0.29
SPG7-221ENST00000569720 MYO6Q9UM54 1294 aa13.23□□□□□ -0.29
SPG7-221ENST00000569720 PCDHGA8Q9Y5G5 932 aa13.23□□□□□ -0.29
SPG7-221ENST00000569720 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.23□□□□□ -0.291e-7■□□□□ 10
SPG7-221ENST00000569720 HELZ2Q9BYK8 2649 aaKnown RBP13.23□□□□□ -0.29
SPG7-221ENST00000569720 CAPN8A6NHC0 703 aa13.22□□□□□ -0.29
SPG7-221ENST00000569720 TMCO5BA8MYB1 307 aa13.22□□□□□ -0.29
SPG7-221ENST00000569720 J3KR12 359 aa13.22□□□□□ -0.29
SPG7-221ENST00000569720 ERVH48-1M5A8F1 160 aa13.22□□□□□ -0.29
SPG7-221ENST00000569720 PALMO75781 387 aa13.22□□□□□ -0.29
SPG7-221ENST00000569720 RNF8O76064 485 aa13.22□□□□□ -0.29
SPG7-221ENST00000569720 TNFP01375 233 aa13.22□□□□□ -0.29
SPG7-221ENST00000569720 CDC25BP30305 580 aa13.22□□□□□ -0.29
SPG7-221ENST00000569720 MMP12P39900 470 aa13.22□□□□□ -0.29
SPG7-221ENST00000569720 MLLT3P42568 568 aaPredicted RBP13.22□□□□□ -0.29
SPG7-221ENST00000569720 CSNK1DP48730 415 aa13.22□□□□□ -0.29
SPG7-221ENST00000569720 LIG3P49916 1009 aa13.22□□□□□ -0.29
SPG7-221ENST00000569720 PAPOLAP51003 745 aaKnown RBP13.22□□□□□ -0.29
SPG7-221ENST00000569720 SRP54P61011 504 aaKnown RBP13.22□□□□□ -0.29
SPG7-221ENST00000569720 POLR2LP62875 67 aaKnown RBP13.22□□□□□ -0.29
SPG7-221ENST00000569720 RHDQ02161 417 aa13.22□□□□□ -0.29
SPG7-221ENST00000569720 MTM1Q13496 603 aa13.22□□□□□ -0.29
SPG7-221ENST00000569720 INPP5AQ14642 412 aa13.22□□□□□ -0.29
SPG7-221ENST00000569720 NFATC4Q14934 902 aa13.22□□□□□ -0.29
SPG7-221ENST00000569720 AGERQ15109 404 aa13.22□□□□□ -0.29
SPG7-221ENST00000569720 WSCD2Q2TBF2 565 aa13.22□□□□□ -0.29
SPG7-221ENST00000569720 TAF1BQ53T94 588 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms