RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 ZSWIM9Q86XI8 627 aa13.92□□□□□ -0.18
HERPUD1-218ENST00000569569 SPATS2Q86XZ4 545 aaKnown RBP13.92□□□□□ -0.18
HERPUD1-218ENST00000569569 DCP2Q8IU60 420 aaKnown RBP13.92□□□□□ -0.18
HERPUD1-218ENST00000569569 NAXDQ8IW45 347 aa13.92□□□□□ -0.18
HERPUD1-218ENST00000569569 CCDC13Q8IYE1 715 aa13.92□□□□□ -0.18
HERPUD1-218ENST00000569569 KATNAL2Q8IYT4 538 aa13.92□□□□□ -0.18
HERPUD1-218ENST00000569569 RCOR2Q8IZ40 523 aa13.92□□□□□ -0.18
HERPUD1-218ENST00000569569 DENND6BQ8NEG7 585 aa13.92□□□□□ -0.18
HERPUD1-218ENST00000569569 SPDYE1Q8NFV5 336 aaPredicted RBP13.92□□□□□ -0.18
HERPUD1-218ENST00000569569 KIAA1524Q8TCG1 905 aa13.92□□□□□ -0.18
HERPUD1-218ENST00000569569 SETD7Q8WTS6 366 aaKnown RBP13.92□□□□□ -0.18
HERPUD1-218ENST00000569569 SPOCK2Q92563 424 aa13.92□□□□□ -0.18
HERPUD1-218ENST00000569569 BMFQ96LC9 184 aa13.92□□□□□ -0.18
HERPUD1-218ENST00000569569 KLF6Q99612 283 aaPredicted RBP13.92□□□□□ -0.18
HERPUD1-218ENST00000569569 C1QTNF7Q9BXJ2 289 aa13.92□□□□□ -0.18
HERPUD1-218ENST00000569569 POLR1EQ9GZS1 481 aaKnown RBP13.92□□□□□ -0.18
HERPUD1-218ENST00000569569 RBM22Q9NW64 420 aaKnown RBP eCLIP13.92□□□□□ -0.186e-8■■■■■ 33.4
HERPUD1-218ENST00000569569 ATP8A1Q9Y2Q0 1164 aa13.92□□□□□ -0.18
HERPUD1-218ENST00000569569 PCDHB9Q9Y5E1 797 aa13.92□□□□□ -0.18
HERPUD1-218ENST00000569569 PCDHGC4Q9Y5F7 938 aa13.92□□□□□ -0.18
HERPUD1-218ENST00000569569 GOLGA4Q13439 2230 aaKnown RBP13.92□□□□□ -0.18
HERPUD1-218ENST00000569569 CFAP69A5D8W1 941 aa13.91□□□□□ -0.18
HERPUD1-218ENST00000569569 POM121BA6NF01 834 aa13.91□□□□□ -0.18
HERPUD1-218ENST00000569569 A6NNZ2 444 aa13.91□□□□□ -0.18
HERPUD1-218ENST00000569569 RAD51BO15315 384 aa13.91□□□□□ -0.18
HERPUD1-218ENST00000569569 FLRT2O43155 660 aa13.91□□□□□ -0.18
HERPUD1-218ENST00000569569 ADRB1P08588 477 aa13.91□□□□□ -0.18
HERPUD1-218ENST00000569569 NFKBIAP25963 317 aa13.91□□□□□ -0.18
HERPUD1-218ENST00000569569 MMP12P39900 470 aa13.91□□□□□ -0.18
HERPUD1-218ENST00000569569 RXRGP48443 463 aa13.91□□□□□ -0.18
HERPUD1-218ENST00000569569 NR2C2P49116 596 aa13.91□□□□□ -0.18
HERPUD1-218ENST00000569569 CLDN2P57739 230 aa13.91□□□□□ -0.18
HERPUD1-218ENST00000569569 FAM193AP78312 1265 aa13.91□□□□□ -0.18
HERPUD1-218ENST00000569569 KIF5AQ12840 1032 aa13.91□□□□□ -0.18
HERPUD1-218ENST00000569569 PDK1Q15118 436 aa13.91□□□□□ -0.18
HERPUD1-218ENST00000569569 TFDP3Q5H9I0 405 aa13.91□□□□□ -0.18
HERPUD1-218ENST00000569569 N4BP2L1Q5TBK1 243 aaPredicted RBP13.91□□□□□ -0.18
HERPUD1-218ENST00000569569 ALG1LQ6GMV1 187 aa13.91□□□□□ -0.18
HERPUD1-218ENST00000569569 KYAT3Q6YP21 454 aaKnown RBP13.91□□□□□ -0.18
HERPUD1-218ENST00000569569 SPOCD1Q6ZMY3 1216 aa13.91□□□□□ -0.18
HERPUD1-218ENST00000569569 Q6ZSR6 202 aa13.91□□□□□ -0.18
HERPUD1-218ENST00000569569 EXD1Q8NHP7 514 aa13.91□□□□□ -0.18
HERPUD1-218ENST00000569569 RHBDD1Q8TEB9 315 aa13.91□□□□□ -0.18
HERPUD1-218ENST00000569569 PDCD6IPQ8WUM4 868 aaKnown RBP13.91□□□□□ -0.18
HERPUD1-218ENST00000569569 LRRN4Q8WUT4 740 aa13.91□□□□□ -0.18
HERPUD1-218ENST00000569569 CENPTQ96BT3 561 aa13.91□□□□□ -0.18
HERPUD1-218ENST00000569569 RBM41Q96IZ5 413 aaKnown RBP13.91□□□□□ -0.18
HERPUD1-218ENST00000569569 CAMK1GQ96NX5 476 aa13.91□□□□□ -0.18
HERPUD1-218ENST00000569569 LGMNQ99538 433 aa13.91□□□□□ -0.18
HERPUD1-218ENST00000569569 SEMA3CQ99985 751 aa13.91□□□□□ -0.18
HERPUD1-218ENST00000569569 WRAP53Q9BUR4 548 aaKnown RBP13.91□□□□□ -0.18
HERPUD1-218ENST00000569569 BRD8Q9H0E9 1235 aa13.91□□□□□ -0.18
HERPUD1-218ENST00000569569 PHTF1Q9UMS5 762 aa13.91□□□□□ -0.18
HERPUD1-218ENST00000569569 PPP1R12AO14974 1030 aaPredicted RBP13.9□□□□□ -0.18
HERPUD1-218ENST00000569569 CST8O60676 142 aa13.9□□□□□ -0.18
HERPUD1-218ENST00000569569 PRKCGP05129 697 aa13.9□□□□□ -0.18
HERPUD1-218ENST00000569569 KRT10P13645 584 aa13.9□□□□□ -0.18
HERPUD1-218ENST00000569569 RABIFP47224 123 aa13.9□□□□□ -0.18
HERPUD1-218ENST00000569569 LIG3P49916 1009 aa13.9□□□□□ -0.18
HERPUD1-218ENST00000569569 DYNLT1P63172 113 aa13.9□□□□□ -0.18
HERPUD1-218ENST00000569569 IL9RQ01113 521 aa13.9□□□□□ -0.18
HERPUD1-218ENST00000569569 AP1B1Q10567 949 aa13.9□□□□□ -0.18
HERPUD1-218ENST00000569569 AGERQ15109 404 aa13.9□□□□□ -0.18
HERPUD1-218ENST00000569569 SHBQ15464 509 aa13.9□□□□□ -0.18
HERPUD1-218ENST00000569569 TRIP6Q15654 476 aaKnown RBP13.9□□□□□ -0.18
HERPUD1-218ENST00000569569 KAZNQ674X7 775 aa13.9□□□□□ -0.18
HERPUD1-218ENST00000569569 NPNTQ6UXI9 565 aa13.9□□□□□ -0.18
HERPUD1-218ENST00000569569 PTAR1Q7Z6K3 402 aaPredicted RBP13.9□□□□□ -0.18
HERPUD1-218ENST00000569569 CCDC50Q8IVM0 306 aa13.9□□□□□ -0.18
HERPUD1-218ENST00000569569 OR13H1Q8NG92 308 aa13.9□□□□□ -0.18
HERPUD1-218ENST00000569569 KRT35Q92764 455 aa13.9□□□□□ -0.18
HERPUD1-218ENST00000569569 OLFM3Q96PB7 478 aa13.9□□□□□ -0.18
HERPUD1-218ENST00000569569 IL12RB2Q99665 862 aa13.9□□□□□ -0.18
HERPUD1-218ENST00000569569 DESI2Q9BSY9 194 aa13.9□□□□□ -0.18
HERPUD1-218ENST00000569569 PCOLCE2Q9UKZ9 415 aa13.9□□□□□ -0.18
HERPUD1-218ENST00000569569 PCDHA3Q9Y5H8 950 aa13.9□□□□□ -0.18
HERPUD1-218ENST00000569569 NCOR2Q9Y618 2525 aa13.89□□□□□ -0.19
HERPUD1-218ENST00000569569 hCG_1818297A0A087WSY0 165 aa13.89□□□□□ -0.19
HERPUD1-218ENST00000569569 CCDC66A2RUB6 948 aa13.89□□□□□ -0.19
HERPUD1-218ENST00000569569 TOR1BO14657 336 aa13.89□□□□□ -0.19
HERPUD1-218ENST00000569569 LZTS3O60299 673 aaPredicted RBP13.89□□□□□ -0.19
HERPUD1-218ENST00000569569 CBFA2T3O75081 653 aa13.89□□□□□ -0.19
HERPUD1-218ENST00000569569 PGLSO95336 258 aa13.89□□□□□ -0.19
HERPUD1-218ENST00000569569 CPP00450 1065 aa13.89□□□□□ -0.19
HERPUD1-218ENST00000569569 JCHAINP01591 159 aa13.89□□□□□ -0.19
HERPUD1-218ENST00000569569 HLA-DQB2P05538 268 aa13.89□□□□□ -0.19
HERPUD1-218ENST00000569569 ITGAVP06756 1048 aa13.89□□□□□ -0.19
HERPUD1-218ENST00000569569 C6P13671 934 aa13.89□□□□□ -0.19
HERPUD1-218ENST00000569569 TGM2P21980 687 aa13.89□□□□□ -0.19
HERPUD1-218ENST00000569569 CTNNA1P35221 906 aaKnown RBP13.89□□□□□ -0.19
HERPUD1-218ENST00000569569 GRK6P43250 576 aa13.89□□□□□ -0.19
HERPUD1-218ENST00000569569 MARCKSL1P49006 195 aa13.89□□□□□ -0.19
HERPUD1-218ENST00000569569 COPS2P61201 443 aa13.89□□□□□ -0.19
HERPUD1-218ENST00000569569 IFI35P80217 286 aaPredicted RBP13.89□□□□□ -0.19
HERPUD1-218ENST00000569569 SEMG2Q02383 582 aa13.89□□□□□ -0.19
HERPUD1-218ENST00000569569 TRAF2Q12933 501 aa13.89□□□□□ -0.19
HERPUD1-218ENST00000569569 BNIP3Q12983 259 aa13.89□□□□□ -0.19
HERPUD1-218ENST00000569569 LLGL1Q15334 1064 aa13.89□□□□□ -0.19
HERPUD1-218ENST00000569569 PPP2R5EQ16537 467 aa13.89□□□□□ -0.19
HERPUD1-218ENST00000569569 INAVAQ3KP66 663 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 187.6 ms