RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 IRF2BP1Q8IU81 584 aa6.67□□□□□ -1.34
HERPUD1-217ENST00000569429 HOMEZQ8IX15 550 aa6.67□□□□□ -1.34
HERPUD1-217ENST00000569429 FAM186BQ8IYM0 893 aa6.67□□□□□ -1.34
HERPUD1-217ENST00000569429 SYCP3Q8IZU3 236 aa6.67□□□□□ -1.34
HERPUD1-217ENST00000569429 TMEM102Q8N9M5 508 aaPredicted RBP6.67□□□□□ -1.34
HERPUD1-217ENST00000569429 CHST14Q8NCH0 376 aa6.67□□□□□ -1.34
HERPUD1-217ENST00000569429 ADAMTS17Q8TE56 1095 aa6.67□□□□□ -1.34
HERPUD1-217ENST00000569429 CT55Q8WUE5 264 aa6.67□□□□□ -1.34
HERPUD1-217ENST00000569429 ZNF516Q92618 1163 aa6.67□□□□□ -1.34
HERPUD1-217ENST00000569429 PDXPQ96GD0 296 aa6.67□□□□□ -1.34
HERPUD1-217ENST00000569429 SLX1AQ9BQ83 275 aa6.67□□□□□ -1.34
HERPUD1-217ENST00000569429 C1QTNF7Q9BXJ2 289 aa6.67□□□□□ -1.34
HERPUD1-217ENST00000569429 KIAA1586Q9HCI6 787 aa6.67□□□□□ -1.34
HERPUD1-217ENST00000569429 LHX9Q9NQ69 397 aa6.67□□□□□ -1.34
HERPUD1-217ENST00000569429 ABCC13Q9NSE7 274 aa6.67□□□□□ -1.34
HERPUD1-217ENST00000569429 BLOC1S4Q9NUP1 217 aa6.67□□□□□ -1.34
HERPUD1-217ENST00000569429 SIDT1Q9NXL6 827 aaKnown RBP6.67□□□□□ -1.34
HERPUD1-217ENST00000569429 KLQ9UEF7 1012 aa6.67□□□□□ -1.34
HERPUD1-217ENST00000569429 SVEP1Q4LDE5 3571 aa6.67□□□□□ -1.34
HERPUD1-217ENST00000569429 A0A0U1RQS6 177 aa6.66□□□□□ -1.34
HERPUD1-217ENST00000569429 RNF212BA8MTL3 300 aa6.66□□□□□ -1.34
HERPUD1-217ENST00000569429 A8MU76 341 aa6.66□□□□□ -1.34
HERPUD1-217ENST00000569429 F5H423 210 aaPredicted RBP6.66□□□□□ -1.34
HERPUD1-217ENST00000569429 MASP2O00187 686 aa6.66□□□□□ -1.34
HERPUD1-217ENST00000569429 PPM1DO15297 605 aa6.66□□□□□ -1.34
HERPUD1-217ENST00000569429 EIF3DO15371 548 aaKnown RBP eCLIP6.66□□□□□ -1.34
HERPUD1-217ENST00000569429 TM7SF2O76062 418 aa6.66□□□□□ -1.34
HERPUD1-217ENST00000569429 TMEM63AO94886 807 aa6.66□□□□□ -1.34
HERPUD1-217ENST00000569429 F12P00748 615 aaPredicted RBP6.66□□□□□ -1.34
HERPUD1-217ENST00000569429 TRIM49P0CI25 452 aa6.66□□□□□ -1.34
HERPUD1-217ENST00000569429 TRIM49CP0CI26 452 aa6.66□□□□□ -1.34
HERPUD1-217ENST00000569429 P4HA1P13674 534 aa6.66□□□□□ -1.34
HERPUD1-217ENST00000569429 PTPN4P29074 926 aa6.66□□□□□ -1.34
HERPUD1-217ENST00000569429 PBX1P40424 430 aa6.66□□□□□ -1.34
HERPUD1-217ENST00000569429 TKTL1P51854 596 aa6.66□□□□□ -1.34
HERPUD1-217ENST00000569429 TBX4P57082 545 aa6.66□□□□□ -1.34
HERPUD1-217ENST00000569429 CSNK1G2P78368 415 aa6.66□□□□□ -1.34
HERPUD1-217ENST00000569429 PSMD6Q15008 389 aa6.66□□□□□ -1.34
HERPUD1-217ENST00000569429 BMP2KLQ5H9B9 411 aa6.66□□□□□ -1.34
HERPUD1-217ENST00000569429 KCTD16Q68DU8 428 aa6.66□□□□□ -1.34
HERPUD1-217ENST00000569429 CXorf57Q6NSI4 855 aaKnown RBP6.66□□□□□ -1.34
HERPUD1-217ENST00000569429 FOXR2Q6PJQ5 311 aa6.66□□□□□ -1.34
HERPUD1-217ENST00000569429 WDR74Q6RFH5 385 aaPredicted RBP6.66□□□□□ -1.34
HERPUD1-217ENST00000569429 NYAP1Q6ZVC0 841 aa6.66□□□□□ -1.34
HERPUD1-217ENST00000569429 MED25Q71SY5 747 aa6.66□□□□□ -1.34
HERPUD1-217ENST00000569429 GRIN3AQ8TCU5 1115 aa6.66□□□□□ -1.34
HERPUD1-217ENST00000569429 GRHL3Q8TE85 626 aa6.66□□□□□ -1.34
HERPUD1-217ENST00000569429 ZDHHC1Q8WTX9 485 aa6.66□□□□□ -1.34
HERPUD1-217ENST00000569429 EDEM1Q92611 657 aa6.66□□□□□ -1.34
HERPUD1-217ENST00000569429 WDR92Q96MX6 357 aa6.66□□□□□ -1.34
HERPUD1-217ENST00000569429 TWNKQ96RR1 684 aa6.66□□□□□ -1.34
HERPUD1-217ENST00000569429 FEM1AQ9BSK4 669 aa6.66□□□□□ -1.34
HERPUD1-217ENST00000569429 APOOQ9BUR5 198 aa6.66□□□□□ -1.34
HERPUD1-217ENST00000569429 ULBP1Q9BZM6 244 aa6.66□□□□□ -1.34
HERPUD1-217ENST00000569429 BRD8Q9H0E9 1235 aa6.66□□□□□ -1.34
HERPUD1-217ENST00000569429 TMEM168Q9H0V1 697 aa6.66□□□□□ -1.34
HERPUD1-217ENST00000569429 FOXP1Q9H334 677 aaPredicted RBP6.66□□□□□ -1.34
HERPUD1-217ENST00000569429 MRPL44Q9H9J2 332 aaKnown RBP6.66□□□□□ -1.34
HERPUD1-217ENST00000569429 OR51B4Q9Y5P0 310 aa6.66□□□□□ -1.34
HERPUD1-217ENST00000569429 WASF2Q9Y6W5 498 aa6.66□□□□□ -1.34
HERPUD1-217ENST00000569429 MGAM2Q2M2H8 2515 aa6.66□□□□□ -1.34
HERPUD1-217ENST00000569429 A0A1W2PQJ5 194 aa6.65□□□□□ -1.34
HERPUD1-217ENST00000569429 A6NL46 340 aa6.65□□□□□ -1.34
HERPUD1-217ENST00000569429 YJEFN3A6XGL0 299 aa6.65□□□□□ -1.34
HERPUD1-217ENST00000569429 E7ENQ6 273 aa6.65□□□□□ -1.34
HERPUD1-217ENST00000569429 CCL21O00585 134 aa6.65□□□□□ -1.34
HERPUD1-217ENST00000569429 NEMP1O14524 444 aa6.65□□□□□ -1.34
HERPUD1-217ENST00000569429 KIAA0754O94854 1291 aa6.65□□□□□ -1.34
HERPUD1-217ENST00000569429 NDUFA10O95299 355 aa6.65□□□□□ -1.34
HERPUD1-217ENST00000569429 GCNT3O95395 438 aa6.65□□□□□ -1.34
HERPUD1-217ENST00000569429 ECEL1O95672 775 aa6.65□□□□□ -1.34
HERPUD1-217ENST00000569429 MT-CO1P00395 513 aa6.65□□□□□ -1.34
HERPUD1-217ENST00000569429 FGF1P05230 155 aa6.65□□□□□ -1.34
HERPUD1-217ENST00000569429 TIMP2P16035 220 aa6.65□□□□□ -1.34
HERPUD1-217ENST00000569429 PCSK6P29122 969 aa6.65□□□□□ -1.34
HERPUD1-217ENST00000569429 ABL2P42684 1182 aa6.65□□□□□ -1.34
HERPUD1-217ENST00000569429 OTUD4Q01804 1114 aaKnown RBP6.65□□□□□ -1.34
HERPUD1-217ENST00000569429 INCA1Q0VD86 236 aa6.65□□□□□ -1.34
HERPUD1-217ENST00000569429 BIRC2Q13490 618 aa6.65□□□□□ -1.34
HERPUD1-217ENST00000569429 ALCAMQ13740 583 aa6.65□□□□□ -1.34
HERPUD1-217ENST00000569429 RAPGEF1Q13905 1077 aa6.65□□□□□ -1.34
HERPUD1-217ENST00000569429 MCM6Q14566 821 aa6.65□□□□□ -1.34
HERPUD1-217ENST00000569429 IL11RAQ14626 422 aa6.65□□□□□ -1.34
HERPUD1-217ENST00000569429 IRF4Q15306 451 aa6.65□□□□□ -1.34
HERPUD1-217ENST00000569429 LONRF1Q17RB8 773 aa6.65□□□□□ -1.34
HERPUD1-217ENST00000569429 SNAP47Q5SQN1 464 aa6.65□□□□□ -1.34
HERPUD1-217ENST00000569429 DPY19L3Q6ZPD9 716 aa6.65□□□□□ -1.34
HERPUD1-217ENST00000569429 LGI2Q8N0V4 545 aa6.65□□□□□ -1.34
HERPUD1-217ENST00000569429 CCAR2Q8N163 923 aaKnown RBP6.65□□□□□ -1.34
HERPUD1-217ENST00000569429 SCML4Q8N228 414 aa6.65□□□□□ -1.34
HERPUD1-217ENST00000569429 PIP4P2Q8N4L2 257 aa6.65□□□□□ -1.34
HERPUD1-217ENST00000569429 CCL4L1Q8NHW4 92 aa6.65□□□□□ -1.34
HERPUD1-217ENST00000569429 ARHGEF26Q96DR7 871 aa6.65□□□□□ -1.34
HERPUD1-217ENST00000569429 FCRL2Q96LA5 508 aaPredicted RBP6.65□□□□□ -1.34
HERPUD1-217ENST00000569429 TRAPPC9Q96Q05 1148 aa6.65□□□□□ -1.34
HERPUD1-217ENST00000569429 ALPK1Q96QP1 1244 aa6.65□□□□□ -1.34
HERPUD1-217ENST00000569429 TMEM121Q9BTD3 319 aa6.65□□□□□ -1.34
HERPUD1-217ENST00000569429 NT5C1AQ9BXI3 368 aa6.65□□□□□ -1.34
HERPUD1-217ENST00000569429 SPATS2LQ9NUQ6 558 aaKnown RBP6.65□□□□□ -1.34
HERPUD1-217ENST00000569429 FAM13BQ9NYF5 915 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms