RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 INTUQ9ULD6 942 aa20.44■□□□□ 0.86
CLK3-225ENST00000569063 A0A1W2PQ67 120 aa20.43■□□□□ 0.86
CLK3-225ENST00000569063 HTRA2O43464 458 aaPredicted RBP20.43■□□□□ 0.86
CLK3-225ENST00000569063 GIMD1P0DJR0 217 aa20.43■□□□□ 0.86
CLK3-225ENST00000569063 C6P13671 934 aa20.43■□□□□ 0.86
CLK3-225ENST00000569063 GARSP41250 739 aaKnown RBP20.43■□□□□ 0.86
CLK3-225ENST00000569063 MMP13P45452 471 aa20.43■□□□□ 0.86
CLK3-225ENST00000569063 ACADVLP49748 655 aa20.43■□□□□ 0.86
CLK3-225ENST00000569063 LRRC14Q15048 493 aa20.43■□□□□ 0.86
CLK3-225ENST00000569063 TCEAL1Q15170 157 aa20.43■□□□□ 0.86
CLK3-225ENST00000569063 ZNF542PQ5EBM4 170 aa20.43■□□□□ 0.86
CLK3-225ENST00000569063 RALGPS1Q5JS13 557 aa20.43■□□□□ 0.86
CLK3-225ENST00000569063 TPRG1LQ5T0D9 272 aa20.43■□□□□ 0.86
CLK3-225ENST00000569063 KDM7AQ6ZMT4 941 aa20.43■□□□□ 0.86
CLK3-225ENST00000569063 RFFLQ8WZ73 363 aa20.43■□□□□ 0.86
CLK3-225ENST00000569063 NOD2Q9HC29 1040 aa20.43■□□□□ 0.86
CLK3-225ENST00000569063 COQ6Q9Y2Z9 468 aa20.43■□□□□ 0.86
CLK3-225ENST00000569063 TPRP12270 2363 aaKnown RBP20.42■□□□□ 0.86
CLK3-225ENST00000569063 TTC24A2A3L6 582 aaPredicted RBP20.42■□□□□ 0.86
CLK3-225ENST00000569063 NEMP2A6NFY4 417 aa20.42■□□□□ 0.86
CLK3-225ENST00000569063 TMEM110-MUSTN1A8MSY1 372 aa20.42■□□□□ 0.86
CLK3-225ENST00000569063 H3BM21 787 aa20.42■□□□□ 0.86
CLK3-225ENST00000569063 SCAMP1O15126 338 aa20.42■□□□□ 0.86
CLK3-225ENST00000569063 SIGLEC6O43699 453 aa20.42■□□□□ 0.86
CLK3-225ENST00000569063 MFSD11O43934 449 aa20.42■□□□□ 0.86
CLK3-225ENST00000569063 SOCS5O75159 536 aa20.42■□□□□ 0.86
CLK3-225ENST00000569063 RFPL3O75679 317 aa20.42■□□□□ 0.86
CLK3-225ENST00000569063 PRKCGP05129 697 aa20.42■□□□□ 0.86
CLK3-225ENST00000569063 THOP1P52888 689 aa20.42■□□□□ 0.86
CLK3-225ENST00000569063 RALGDSQ12967 914 aa20.42■□□□□ 0.86
CLK3-225ENST00000569063 EIF2B5Q13144 721 aaKnown RBP20.42■□□□□ 0.86
CLK3-225ENST00000569063 ILKQ13418 452 aa20.42■□□□□ 0.86
CLK3-225ENST00000569063 IRF4Q15306 451 aa20.42■□□□□ 0.86
CLK3-225ENST00000569063 WSCD2Q2TBF2 565 aa20.42■□□□□ 0.86
CLK3-225ENST00000569063 CCDC157Q569K6 752 aa20.42■□□□□ 0.86
CLK3-225ENST00000569063 DHRS13Q6UX07 377 aa20.42■□□□□ 0.86
CLK3-225ENST00000569063 PQLC3Q8N755 202 aa20.42■□□□□ 0.86
CLK3-225ENST00000569063 TC2NQ8N9U0 490 aa20.42■□□□□ 0.86
CLK3-225ENST00000569063 FATE1Q969F0 183 aa20.42■□□□□ 0.86
CLK3-225ENST00000569063 CAAP1Q9H8G2 361 aa20.42■□□□□ 0.86
CLK3-225ENST00000569063 SCUBE2Q9NQ36 999 aa20.42■□□□□ 0.86
CLK3-225ENST00000569063 NLGN3Q9NZ94 848 aa20.42■□□□□ 0.86
CLK3-225ENST00000569063 KLF15Q9UIH9 416 aa20.42■□□□□ 0.86
CLK3-225ENST00000569063 PCDHGC4Q9Y5F7 938 aa20.42■□□□□ 0.86
CLK3-225ENST00000569063 CHD8Q9HCK8 2581 aa20.41■□□□□ 0.86
CLK3-225ENST00000569063 PTPRBP23467 1997 aa20.41■□□□□ 0.86
CLK3-225ENST00000569063 ZNF487B1APH4 448 aa20.41■□□□□ 0.86
CLK3-225ENST00000569063 KDELR1P24390 212 aa20.41■□□□□ 0.86
CLK3-225ENST00000569063 ACP1P24666 158 aa20.41■□□□□ 0.86
CLK3-225ENST00000569063 PEX5P50542 639 aa20.41■□□□□ 0.86
CLK3-225ENST00000569063 SEMG2Q02383 582 aa20.41■□□□□ 0.86
CLK3-225ENST00000569063 IFI16Q16666 785 aaKnown RBP20.41■□□□□ 0.86
CLK3-225ENST00000569063 HS1BP3Q53T59 392 aa20.41■□□□□ 0.86
CLK3-225ENST00000569063 TIGD7Q6NT04 549 aaPredicted RBP20.41■□□□□ 0.86
CLK3-225ENST00000569063 LIPIQ6XZB0 460 aa20.41■□□□□ 0.86
CLK3-225ENST00000569063 DPPA4Q7L190 304 aa20.41■□□□□ 0.86
CLK3-225ENST00000569063 ZNF548Q8NEK5 533 aaPredicted RBP20.41■□□□□ 0.86
CLK3-225ENST00000569063 RAPGEF5Q92565 580 aa20.41■□□□□ 0.86
CLK3-225ENST00000569063 TSGA13Q96PP4 275 aa20.41■□□□□ 0.86
CLK3-225ENST00000569063 CSNK1G3Q9Y6M4 447 aa20.41■□□□□ 0.86
CLK3-225ENST00000569063 ASPMQ8IZT6 3477 aa20.4■□□□□ 0.86
CLK3-225ENST00000569063 MATN3O15232 486 aa20.4■□□□□ 0.86
CLK3-225ENST00000569063 FFAR2O15552 330 aa20.4■□□□□ 0.86
CLK3-225ENST00000569063 LZTS3O60299 673 aaPredicted RBP20.4■□□□□ 0.86
CLK3-225ENST00000569063 CAPNS1P04632 268 aa20.4■□□□□ 0.86
CLK3-225ENST00000569063 ALPPL2P10696 532 aa20.4■□□□□ 0.86
CLK3-225ENST00000569063 JUNDP17535 347 aa20.4■□□□□ 0.86
CLK3-225ENST00000569063 CCNCP24863 283 aa20.4■□□□□ 0.86
CLK3-225ENST00000569063 MAXP61244 160 aa20.4■□□□□ 0.86
CLK3-225ENST00000569063 ZFYVE27Q5T4F4 411 aa20.4■□□□□ 0.86
CLK3-225ENST00000569063 LRRC38Q5VT99 294 aa20.4■□□□□ 0.86
CLK3-225ENST00000569063 MACC1Q6ZN28 852 aa20.4■□□□□ 0.86
CLK3-225ENST00000569063 TMPRSS12Q86WS5 348 aa20.4■□□□□ 0.86
CLK3-225ENST00000569063 VSIG1Q86XK7 387 aa20.4■□□□□ 0.86
CLK3-225ENST00000569063 PAF1Q8N7H5 531 aa20.4■□□□□ 0.86
CLK3-225ENST00000569063 FAM181AQ8N9Y4 354 aa20.4■□□□□ 0.86
CLK3-225ENST00000569063 BTN2A2Q8WVV5 523 aa20.4■□□□□ 0.86
CLK3-225ENST00000569063 MAML1Q92585 1016 aa20.4■□□□□ 0.86
CLK3-225ENST00000569063 TBATAQ96M53 351 aa20.4■□□□□ 0.86
CLK3-225ENST00000569063 RNF157Q96PX1 679 aa20.4■□□□□ 0.86
CLK3-225ENST00000569063 DUSP23Q9BVJ7 150 aa20.4■□□□□ 0.86
CLK3-225ENST00000569063 ANKRD36A6QL64 1941 aa20.39■□□□□ 0.86
CLK3-225ENST00000569063 PLXNB3Q9ULL4 1909 aa20.39■□□□□ 0.86
CLK3-225ENST00000569063 AKAP13Q12802 2813 aa20.39■□□□□ 0.85
CLK3-225ENST00000569063 C3orf70A6NLC5 250 aaPredicted RBP20.39■□□□□ 0.85
CLK3-225ENST00000569063 ELFN1P0C7U0 828 aa20.39■□□□□ 0.85
CLK3-225ENST00000569063 MX2P20592 715 aa20.39■□□□□ 0.85
CLK3-225ENST00000569063 SLC1A1P43005 524 aa20.39■□□□□ 0.85
CLK3-225ENST00000569063 INPP5AQ14642 412 aa20.39■□□□□ 0.85
CLK3-225ENST00000569063 RBSNQ9H1K0 784 aa20.39■□□□□ 0.85
CLK3-225ENST00000569063 NT5MQ9NPB1 228 aa20.39■□□□□ 0.85
CLK3-225ENST00000569063 AMACRQ9UHK6 382 aa20.39■□□□□ 0.85
CLK3-225ENST00000569063 ZMIZ1Q9ULJ6 1067 aa20.39■□□□□ 0.85
CLK3-225ENST00000569063 PNMA8BQ9ULN7 279 aaPredicted RBP20.39■□□□□ 0.85
CLK3-225ENST00000569063 PHTF1Q9UMS5 762 aa20.39■□□□□ 0.85
CLK3-225ENST00000569063 ARID1BQ8NFD5 2236 aaPredicted RBP20.38■□□□□ 0.85
CLK3-225ENST00000569063 LRRK1Q38SD2 2015 aa20.38■□□□□ 0.85
CLK3-225ENST00000569063 CEP295Q9C0D2 2601 aa20.38■□□□□ 0.85
CLK3-225ENST00000569063 K7ESM1 405 aa20.38■□□□□ 0.85
CLK3-225ENST00000569063 AQP9O43315 295 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms