RNA–Protein interactions for RNA: ENST00000569062.1

ABCA3-206, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 5

Gene ABCA3, Length 900 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-206ENST00000569062 NME1P15531 152 aaKnown RBP20.28■□□□□ 0.84
ABCA3-206ENST00000569062 MAN1A1P33908 653 aa20.28■□□□□ 0.84
ABCA3-206ENST00000569062 CLDN6P56747 220 aa20.28■□□□□ 0.84
ABCA3-206ENST00000569062 HNRNPKP61978 463 aaKnown RBP eCLIP20.28■□□□□ 0.84
ABCA3-206ENST00000569062 RALGDSQ12967 914 aa20.28■□□□□ 0.84
ABCA3-206ENST00000569062 EIF2B5Q13144 721 aaKnown RBP20.28■□□□□ 0.84
ABCA3-206ENST00000569062 PAFAH1B3Q15102 231 aaKnown RBP20.28■□□□□ 0.84
ABCA3-206ENST00000569062 PDK2Q15119 407 aa20.28■□□□□ 0.84
ABCA3-206ENST00000569062 IRF4Q15306 451 aa20.28■□□□□ 0.84
ABCA3-206ENST00000569062 SMAD1Q15797 465 aaKnown RBP20.28■□□□□ 0.84
ABCA3-206ENST00000569062 PAF1Q8N7H5 531 aa20.28■□□□□ 0.84
ABCA3-206ENST00000569062 OR4C6Q8NH72 309 aa20.28■□□□□ 0.84
ABCA3-206ENST00000569062 MGME1Q9BQP7 344 aa20.28■□□□□ 0.84
ABCA3-206ENST00000569062 ZNF670Q9BS34 389 aa20.28■□□□□ 0.84
ABCA3-206ENST00000569062 C1QTNF7Q9BXJ2 289 aa20.28■□□□□ 0.84
ABCA3-206ENST00000569062 ZMIZ1Q9ULJ6 1067 aa20.28■□□□□ 0.84
ABCA3-206ENST00000569062 PNMA8BQ9ULN7 279 aaPredicted RBP20.28■□□□□ 0.84
ABCA3-206ENST00000569062 PCDHGC4Q9Y5F7 938 aa20.28■□□□□ 0.84
ABCA3-206ENST00000569062 PCDHGA1Q9Y5H4 931 aa20.28■□□□□ 0.84
ABCA3-206ENST00000569062 IGF2RP11717 2491 aa20.28■□□□□ 0.84
ABCA3-206ENST00000569062 FREM2Q5SZK8 3169 aa20.27■□□□□ 0.84
ABCA3-206ENST00000569062 KRT37O76014 449 aa20.27■□□□□ 0.84
ABCA3-206ENST00000569062 NEBLO76041 1014 aa20.27■□□□□ 0.84
ABCA3-206ENST00000569062 KRT7P08729 469 aa20.27■□□□□ 0.84
ABCA3-206ENST00000569062 CKMT2P17540 419 aa20.27■□□□□ 0.84
ABCA3-206ENST00000569062 HSPA9P38646 679 aaKnown RBP20.27■□□□□ 0.84
ABCA3-206ENST00000569062 MMP13P45452 471 aa20.27■□□□□ 0.84
ABCA3-206ENST00000569062 THOP1P52888 689 aa20.27■□□□□ 0.84
ABCA3-206ENST00000569062 ZNF211Q13398 564 aaPredicted RBP20.27■□□□□ 0.84
ABCA3-206ENST00000569062 LRRC14Q15048 493 aa20.27■□□□□ 0.84
ABCA3-206ENST00000569062 WSCD2Q2TBF2 565 aa20.27■□□□□ 0.84
ABCA3-206ENST00000569062 MARC1Q5VT66 337 aa20.27■□□□□ 0.84
ABCA3-206ENST00000569062 GALNT15Q8N3T1 639 aa20.27■□□□□ 0.84
ABCA3-206ENST00000569062 NSMCE1Q8WV22 266 aa20.27■□□□□ 0.84
ABCA3-206ENST00000569062 NUDCD1Q96RS6 583 aa20.27■□□□□ 0.84
ABCA3-206ENST00000569062 NOD2Q9HC29 1040 aa20.27■□□□□ 0.84
ABCA3-206ENST00000569062 SCUBE2Q9NQ36 999 aa20.27■□□□□ 0.84
ABCA3-206ENST00000569062 LCMT1Q9UIC8 334 aa20.27■□□□□ 0.84
ABCA3-206ENST00000569062 MYLKQ15746 1914 aa20.26■□□□□ 0.83
ABCA3-206ENST00000569062 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.26■□□□□ 0.83
ABCA3-206ENST00000569062 TMEM8BA6NDV4 472 aa20.26■□□□□ 0.83
ABCA3-206ENST00000569062 A8MX80 341 aa20.26■□□□□ 0.83
ABCA3-206ENST00000569062 LZTS3O60299 673 aaPredicted RBP20.26■□□□□ 0.83
ABCA3-206ENST00000569062 JUNDP17535 347 aa20.26■□□□□ 0.83
ABCA3-206ENST00000569062 GARSP41250 739 aaKnown RBP20.26■□□□□ 0.83
ABCA3-206ENST00000569062 YPEL5P62699 121 aa20.26■□□□□ 0.83
ABCA3-206ENST00000569062 POLR2LP62875 67 aaKnown RBP20.26■□□□□ 0.83
ABCA3-206ENST00000569062 GALNT2Q10471 571 aa20.26■□□□□ 0.83
ABCA3-206ENST00000569062 PTK2BQ14289 1009 aa20.26■□□□□ 0.83
ABCA3-206ENST00000569062 ZFYVE27Q5T4F4 411 aa20.26■□□□□ 0.83
ABCA3-206ENST00000569062 MAP7D3Q8IWC1 876 aa20.26■□□□□ 0.83
ABCA3-206ENST00000569062 RBFAQ8N0V3 343 aa20.26■□□□□ 0.83
ABCA3-206ENST00000569062 BBS5Q8N3I7 341 aa20.26■□□□□ 0.83
ABCA3-206ENST00000569062 PQLC3Q8N755 202 aa20.26■□□□□ 0.83
ABCA3-206ENST00000569062 TC2NQ8N9U0 490 aa20.26■□□□□ 0.83
ABCA3-206ENST00000569062 ZNF548Q8NEK5 533 aaPredicted RBP20.26■□□□□ 0.83
ABCA3-206ENST00000569062 PDCD6IPQ8WUM4 868 aaKnown RBP20.26■□□□□ 0.83
ABCA3-206ENST00000569062 LRRN4Q8WUT4 740 aa20.26■□□□□ 0.83
ABCA3-206ENST00000569062 ZCCHC14Q8WYQ9 949 aaKnown RBP20.26■□□□□ 0.83
ABCA3-206ENST00000569062 RAPGEF5Q92565 580 aa20.26■□□□□ 0.83
ABCA3-206ENST00000569062 FAF2Q96CS3 445 aa20.26■□□□□ 0.83
ABCA3-206ENST00000569062 TCEAL2Q9H3H9 227 aaPredicted RBP20.26■□□□□ 0.83
ABCA3-206ENST00000569062 LRP4O75096 1905 aa20.25■□□□□ 0.83
ABCA3-206ENST00000569062 H3BM21 787 aa20.25■□□□□ 0.83
ABCA3-206ENST00000569062 SCAMP1O15126 338 aa20.25■□□□□ 0.83
ABCA3-206ENST00000569062 HTRA2O43464 458 aaPredicted RBP20.25■□□□□ 0.83
ABCA3-206ENST00000569062 MTA2O94776 668 aa20.25■□□□□ 0.83
ABCA3-206ENST00000569062 CAPNS1P04632 268 aa20.25■□□□□ 0.83
ABCA3-206ENST00000569062 C1SP09871 688 aa20.25■□□□□ 0.83
ABCA3-206ENST00000569062 MYF5P13349 255 aa20.25■□□□□ 0.83
ABCA3-206ENST00000569062 KDELR1P24390 212 aa20.25■□□□□ 0.83
ABCA3-206ENST00000569062 ACP1P24666 158 aa20.25■□□□□ 0.83
ABCA3-206ENST00000569062 TRAF2Q12933 501 aa20.25■□□□□ 0.83
ABCA3-206ENST00000569062 AGERQ15109 404 aa20.25■□□□□ 0.83
ABCA3-206ENST00000569062 LIPIQ6XZB0 460 aa20.25■□□□□ 0.83
ABCA3-206ENST00000569062 DPPA4Q7L190 304 aa20.25■□□□□ 0.83
ABCA3-206ENST00000569062 LRRC49Q8IUZ0 686 aa20.25■□□□□ 0.83
ABCA3-206ENST00000569062 RHOT2Q8IXI1 618 aa20.25■□□□□ 0.83
ABCA3-206ENST00000569062 TEX26Q8N6G2 289 aa20.25■□□□□ 0.83
ABCA3-206ENST00000569062 NT5MQ9NPB1 228 aa20.25■□□□□ 0.83
ABCA3-206ENST00000569062 NLGN3Q9NZ94 848 aa20.25■□□□□ 0.83
ABCA3-206ENST00000569062 CACNA1BQ00975 2339 aa20.25■□□□□ 0.83
ABCA3-206ENST00000569062 ZFHX4Q86UP3 3567 aa20.24■□□□□ 0.83
ABCA3-206ENST00000569062 NEMP2A6NFY4 417 aa20.24■□□□□ 0.83
ABCA3-206ENST00000569062 K7ESM1 405 aa20.24■□□□□ 0.83
ABCA3-206ENST00000569062 SOCS5O75159 536 aa20.24■□□□□ 0.83
ABCA3-206ENST00000569062 ELFN1P0C7U0 828 aa20.24■□□□□ 0.83
ABCA3-206ENST00000569062 ALPPL2P10696 532 aa20.24■□□□□ 0.83
ABCA3-206ENST00000569062 GM2AP17900 193 aa20.24■□□□□ 0.83
ABCA3-206ENST00000569062 ARHGAP25P42331 645 aa20.24■□□□□ 0.83
ABCA3-206ENST00000569062 DAB2P98082 770 aa20.24■□□□□ 0.83
ABCA3-206ENST00000569062 GBE1Q04446 702 aa20.24■□□□□ 0.83
ABCA3-206ENST00000569062 SLC10A2Q12908 348 aaPredicted RBP20.24■□□□□ 0.83
ABCA3-206ENST00000569062 INPP5AQ14642 412 aa20.24■□□□□ 0.83
ABCA3-206ENST00000569062 HS1BP3Q53T59 392 aa20.24■□□□□ 0.83
ABCA3-206ENST00000569062 MACC1Q6ZN28 852 aa20.24■□□□□ 0.83
ABCA3-206ENST00000569062 NYAP1Q6ZVC0 841 aa20.24■□□□□ 0.83
ABCA3-206ENST00000569062 PLA2G15Q8NCC3 412 aa20.24■□□□□ 0.83
ABCA3-206ENST00000569062 RFFLQ8WZ73 363 aa20.24■□□□□ 0.83
ABCA3-206ENST00000569062 APOLD1Q96LR9 279 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms