RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 PRPF4O43172 522 aaKnown RBP eCLIP3.62□□□□□ -1.83
HMGB1P6-201ENST00000569046 TULP3O75386 442 aa3.62□□□□□ -1.83
HMGB1P6-201ENST00000569046 UFL1O94874 794 aa3.62□□□□□ -1.83
HMGB1P6-201ENST00000569046 TOMM40O96008 361 aa3.62□□□□□ -1.83
HMGB1P6-201ENST00000569046 CHRNB1P11230 501 aa3.62□□□□□ -1.83
HMGB1P6-201ENST00000569046 ELF1P32519 619 aa3.62□□□□□ -1.83
HMGB1P6-201ENST00000569046 CIITAP33076 1130 aa3.62□□□□□ -1.83
HMGB1P6-201ENST00000569046 KRT9P35527 623 aa3.62□□□□□ -1.83
HMGB1P6-201ENST00000569046 TSPAN7P41732 249 aa3.62□□□□□ -1.83
HMGB1P6-201ENST00000569046 CCT4P50991 539 aaKnown RBP3.62□□□□□ -1.83
HMGB1P6-201ENST00000569046 RCAN1P53805 252 aa3.62□□□□□ -1.83
HMGB1P6-201ENST00000569046 ADPRHP54922 357 aa3.62□□□□□ -1.83
HMGB1P6-201ENST00000569046 ZBTB16Q05516 673 aa3.62□□□□□ -1.83
HMGB1P6-201ENST00000569046 PRKG2Q13237 762 aa3.62□□□□□ -1.83
HMGB1P6-201ENST00000569046 DLGAP5Q15398 846 aa3.62□□□□□ -1.83
HMGB1P6-201ENST00000569046 INPP5JQ15735 1006 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P6-201ENST00000569046 PARP10Q53GL7 1025 aa3.62□□□□□ -1.83
HMGB1P6-201ENST00000569046 WDR45BQ5MNZ6 344 aa3.62□□□□□ -1.83
HMGB1P6-201ENST00000569046 TANGO2Q6ICL3 276 aa3.62□□□□□ -1.83
HMGB1P6-201ENST00000569046 KLHL17Q6TDP4 642 aa3.62□□□□□ -1.83
HMGB1P6-201ENST00000569046 LRIG3Q6UXM1 1119 aa3.62□□□□□ -1.83
HMGB1P6-201ENST00000569046 COLCA1Q6ZS62 124 aa3.62□□□□□ -1.83
HMGB1P6-201ENST00000569046 B4GALNT4Q76KP1 1039 aa3.62□□□□□ -1.83
HMGB1P6-201ENST00000569046 Q7L0L9 218 aa3.62□□□□□ -1.83
HMGB1P6-201ENST00000569046 RRAGAQ7L523 313 aa3.62□□□□□ -1.83
HMGB1P6-201ENST00000569046 MOGAT3Q86VF5 341 aa3.62□□□□□ -1.83
HMGB1P6-201ENST00000569046 PCYOX1LQ8NBM8 494 aa3.62□□□□□ -1.83
HMGB1P6-201ENST00000569046 ADPRHL1Q8NDY3 354 aa3.62□□□□□ -1.83
HMGB1P6-201ENST00000569046 MPLKIPQ8TAP9 179 aa3.62□□□□□ -1.83
HMGB1P6-201ENST00000569046 OTUD7AQ8TE49 926 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P6-201ENST00000569046 SLC25A28Q96A46 364 aa3.62□□□□□ -1.83
HMGB1P6-201ENST00000569046 CHCHD6Q9BRQ6 235 aa3.62□□□□□ -1.83
HMGB1P6-201ENST00000569046 FAM167BQ9BTA0 163 aa3.62□□□□□ -1.83
HMGB1P6-201ENST00000569046 FRMD8Q9BZ67 464 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P6-201ENST00000569046 BRD8Q9H0E9 1235 aa3.62□□□□□ -1.83
HMGB1P6-201ENST00000569046 ELAC1Q9H777 363 aaKnown RBP3.62□□□□□ -1.83
HMGB1P6-201ENST00000569046 C19orf53Q9UNZ5 99 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P6-201ENST00000569046 SH3TC1Q8TE82 1336 aa3.62□□□□□ -1.83
HMGB1P6-201ENST00000569046 CENPFP49454 3210 aa3.62□□□□□ -1.83
HMGB1P6-201ENST00000569046 SZT2Q5T011 3432 aa3.61□□□□□ -1.83
HMGB1P6-201ENST00000569046 IGLV5-39A0A0G2JS06 123 aa3.61□□□□□ -1.83
HMGB1P6-201ENST00000569046 CLRN2A0PK11 232 aa3.61□□□□□ -1.83
HMGB1P6-201ENST00000569046 FAM90A20PA6NIJ5 464 aa3.61□□□□□ -1.83
HMGB1P6-201ENST00000569046 KCNJ18B7U540 433 aa3.61□□□□□ -1.83
HMGB1P6-201ENST00000569046 MCIDASD6RGH6 385 aa3.61□□□□□ -1.83
HMGB1P6-201ENST00000569046 H3BNX3 289 aa3.61□□□□□ -1.83
HMGB1P6-201ENST00000569046 NEURL1O76050 574 aa3.61□□□□□ -1.83
HMGB1P6-201ENST00000569046 NFATC1O95644 943 aa3.61□□□□□ -1.83
HMGB1P6-201ENST00000569046 RPS12P25398 132 aaKnown RBP3.61□□□□□ -1.83
HMGB1P6-201ENST00000569046 RAD52P43351 418 aa3.61□□□□□ -1.83
HMGB1P6-201ENST00000569046 CDK7P50613 346 aa3.61□□□□□ -1.83
HMGB1P6-201ENST00000569046 NR1H2P55055 460 aa3.61□□□□□ -1.83
HMGB1P6-201ENST00000569046 RPS8P62241 208 aaKnown RBP3.61□□□□□ -1.83
HMGB1P6-201ENST00000569046 SP3Q02447 781 aa3.61□□□□□ -1.83
HMGB1P6-201ENST00000569046 SREBF2Q12772 1141 aa3.61□□□□□ -1.83
HMGB1P6-201ENST00000569046 MYBPC2Q14324 1141 aa3.61□□□□□ -1.83
HMGB1P6-201ENST00000569046 RPS6KA2Q15349 733 aa3.61□□□□□ -1.83
HMGB1P6-201ENST00000569046 ALDH1L2Q3SY69 923 aa3.61□□□□□ -1.83
HMGB1P6-201ENST00000569046 LRRC24Q50LG9 513 aa3.61□□□□□ -1.83
HMGB1P6-201ENST00000569046 FBXO47Q5MNV8 452 aa3.61□□□□□ -1.83
HMGB1P6-201ENST00000569046 C6orf10Q5SRN2 563 aa3.61□□□□□ -1.83
HMGB1P6-201ENST00000569046 CCDC30Q5VVM6 783 aa3.61□□□□□ -1.83
HMGB1P6-201ENST00000569046 SPATA1Q5VX52 437 aa3.61□□□□□ -1.83
HMGB1P6-201ENST00000569046 RAB11FIP2Q7L804 512 aa3.61□□□□□ -1.83
HMGB1P6-201ENST00000569046 FASTKD5Q7L8L6 764 aaKnown RBP3.61□□□□□ -1.83
HMGB1P6-201ENST00000569046 RASGRP2Q7LDG7 609 aa3.61□□□□□ -1.83
HMGB1P6-201ENST00000569046 GPSM1Q86YR5 675 aa3.61□□□□□ -1.83
HMGB1P6-201ENST00000569046 CCDC117Q8IWD4 279 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P6-201ENST00000569046 CNPY4Q8N129 248 aa3.61□□□□□ -1.83
HMGB1P6-201ENST00000569046 PELI3Q8N2H9 469 aa3.61□□□□□ -1.83
HMGB1P6-201ENST00000569046 FAM110DQ8TAY7 271 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P6-201ENST00000569046 HERVK_113Q902F9 699 aa3.61□□□□□ -1.83
HMGB1P6-201ENST00000569046 C3orf49Q96BT1 292 aa3.61□□□□□ -1.83
HMGB1P6-201ENST00000569046 CFAP53Q96M91 514 aa3.61□□□□□ -1.83
HMGB1P6-201ENST00000569046 EYA3Q99504 573 aa3.61□□□□□ -1.83
HMGB1P6-201ENST00000569046 NPAS1Q99742 590 aa3.61□□□□□ -1.83
HMGB1P6-201ENST00000569046 WDR83Q9BRX9 315 aaKnown RBP3.61□□□□□ -1.83
HMGB1P6-201ENST00000569046 DDX23Q9BUQ8 820 aaKnown RBP3.61□□□□□ -1.83
HMGB1P6-201ENST00000569046 HDHD5Q9BXW7 423 aa3.61□□□□□ -1.83
HMGB1P6-201ENST00000569046 PLEKHA5Q9HAU0 1116 aa3.61□□□□□ -1.83
HMGB1P6-201ENST00000569046 PDE11AQ9HCR9 933 aa3.61□□□□□ -1.83
HMGB1P6-201ENST00000569046 ZNF304Q9HCX3 659 aa3.61□□□□□ -1.83
HMGB1P6-201ENST00000569046 TSPYL4Q9UJ04 414 aa3.61□□□□□ -1.83
HMGB1P6-201ENST00000569046 KCND3Q9UK17 655 aa3.61□□□□□ -1.83
HMGB1P6-201ENST00000569046 SLC8A2Q9UPR5 921 aa3.61□□□□□ -1.83
HMGB1P6-201ENST00000569046 DTX4Q9Y2E6 619 aa3.61□□□□□ -1.83
HMGB1P6-201ENST00000569046 SQORQ9Y6N5 450 aa3.61□□□□□ -1.83
HMGB1P6-201ENST00000569046 IBTKQ9P2D0 1353 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P6-201ENST00000569046 SSC5DA1L4H1 1573 aa3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 MKI67P46013 3256 aaKnown RBP3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 A0A1W2PRQ8 180 aa3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 DPPA5A6NC42 116 aa3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 CD8B2A6NJW9 211 aa3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 EFCAB8A8MWE9 144 aa3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 FOXO6A8MYZ6 492 aa3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 B4DGG1 531 aa3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 SNAP23O00161 211 aa3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 GRM8O00222 908 aa3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 HOXC11O43248 304 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 TMCC2O75069 709 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms