RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 PCDH12Q9NPG4 1184 aa14.99□□□□□ -0.01
USB1-214ENST00000568848 RRN3Q9NYV6 651 aa14.99□□□□□ -0.01
USB1-214ENST00000568848 LHX3Q9UBR4 397 aa14.99□□□□□ -0.01
USB1-214ENST00000568848 BUB1BO60566 1050 aaPredicted RBP14.98□□□□□ -0.01
USB1-214ENST00000568848 RAMP2O60895 175 aa14.98□□□□□ -0.01
USB1-214ENST00000568848 RHOQP17081 205 aa14.98□□□□□ -0.01
USB1-214ENST00000568848 MPSTP25325 297 aa14.98□□□□□ -0.01
USB1-214ENST00000568848 CCKBRP32239 447 aa14.98□□□□□ -0.01
USB1-214ENST00000568848 PPP1R2P41236 205 aa14.98□□□□□ -0.01
USB1-214ENST00000568848 KLK7P49862 253 aa14.98□□□□□ -0.01
USB1-214ENST00000568848 OR1D5P58170 312 aa14.98□□□□□ -0.01
USB1-214ENST00000568848 RHOAP61586 193 aa14.98□□□□□ -0.01
USB1-214ENST00000568848 YPEL5P62699 121 aa14.98□□□□□ -0.01
USB1-214ENST00000568848 NOMO3P69849 1222 aa14.98□□□□□ -0.01
USB1-214ENST00000568848 MTA1Q13330 715 aa14.98□□□□□ -0.01
USB1-214ENST00000568848 ELOCQ15369 112 aa14.98□□□□□ -0.01
USB1-214ENST00000568848 CYTH1Q15438 398 aa14.98□□□□□ -0.01
USB1-214ENST00000568848 SPRED1Q7Z699 444 aa14.98□□□□□ -0.01
USB1-214ENST00000568848 ZDHHC17Q8IUH5 632 aa14.98□□□□□ -0.01
USB1-214ENST00000568848 FSTL5Q8N475 847 aaPredicted RBP14.98□□□□□ -0.01
USB1-214ENST00000568848 FAM46DQ8NEK8 389 aa14.98□□□□□ -0.01
USB1-214ENST00000568848 GPR156Q8NFN8 814 aa14.98□□□□□ -0.01
USB1-214ENST00000568848 PATE1Q8WXA2 126 aa14.98□□□□□ -0.01
USB1-214ENST00000568848 NSMCE3Q96MG7 304 aa14.98□□□□□ -0.01
USB1-214ENST00000568848 GDAP1L1Q96MZ0 367 aa14.98□□□□□ -0.01
USB1-214ENST00000568848 NUDT22Q9BRQ3 303 aa14.98□□□□□ -0.01
USB1-214ENST00000568848 C11orf70Q9BRQ4 267 aa14.98□□□□□ -0.01
USB1-214ENST00000568848 TTYH3Q9C0H2 523 aa14.98□□□□□ -0.01
USB1-214ENST00000568848 TMEM248Q9NWD8 314 aa14.98□□□□□ -0.01
USB1-214ENST00000568848 PPARGC1AQ9UBK2 798 aaKnown RBP14.98□□□□□ -0.01
USB1-214ENST00000568848 MOSPD1Q9UJG1 213 aa14.98□□□□□ -0.01
USB1-214ENST00000568848 TEX15Q9BXT5 2789 aa14.98□□□□□ -0.01
USB1-214ENST00000568848 TTC24A2A3L6 582 aaPredicted RBP14.97□□□□□ -0.01
USB1-214ENST00000568848 KDELR3O43731 214 aa14.97□□□□□ -0.01
USB1-214ENST00000568848 PLEKP08567 350 aaPredicted RBP14.97□□□□□ -0.01
USB1-214ENST00000568848 LIG3P49916 1009 aa14.97□□□□□ -0.01
USB1-214ENST00000568848 HDAC4P56524 1084 aa14.97□□□□□ -0.01
USB1-214ENST00000568848 ZFP36L1Q07352 338 aaKnown RBP14.97□□□□□ -0.01
USB1-214ENST00000568848 TMEM52BQ4KMG9 183 aa14.97□□□□□ -0.01
USB1-214ENST00000568848 MIIPQ5JXC2 388 aa14.97□□□□□ -0.01
USB1-214ENST00000568848 HIST2H2BCQ6DN03 193 aa14.97□□□□□ -0.01
USB1-214ENST00000568848 TAF8Q7Z7C8 310 aa14.97□□□□□ -0.01
USB1-214ENST00000568848 SLITRK4Q8IW52 837 aa14.97□□□□□ -0.01
USB1-214ENST00000568848 TBC1D31Q96DN5 1066 aa14.97□□□□□ -0.01
USB1-214ENST00000568848 LGR4Q9BXB1 951 aa14.97□□□□□ -0.01
USB1-214ENST00000568848 RWDD2AQ9UIY3 292 aa14.97□□□□□ -0.01
USB1-214ENST00000568848 B4GAT1O43505 415 aa14.96□□□□□ -0.01
USB1-214ENST00000568848 IGSF6O95976 241 aa14.96□□□□□ -0.01
USB1-214ENST00000568848 ALPIP09923 528 aa14.96□□□□□ -0.01
USB1-214ENST00000568848 CHRNB2P17787 502 aa14.96□□□□□ -0.01
USB1-214ENST00000568848 GM2AP17900 193 aa14.96□□□□□ -0.01
USB1-214ENST00000568848 XPAP23025 273 aaPredicted RBP14.96□□□□□ -0.01
USB1-214ENST00000568848 ETFBP38117 255 aa14.96□□□□□ -0.01
USB1-214ENST00000568848 MLLT3P42568 568 aaPredicted RBP14.96□□□□□ -0.01
USB1-214ENST00000568848 MAPKAPK2P49137 400 aa14.96□□□□□ -0.01
USB1-214ENST00000568848 PTPRRQ15256 657 aa14.96□□□□□ -0.01
USB1-214ENST00000568848 MAP9Q49MG5 647 aa14.96□□□□□ -0.01
USB1-214ENST00000568848 CERCAMQ5T4B2 595 aa14.96□□□□□ -0.01
USB1-214ENST00000568848 NKAIN2Q5VXU1 208 aa14.96□□□□□ -0.01
USB1-214ENST00000568848 ZNF574Q6ZN55 896 aaPredicted RBP14.96□□□□□ -0.01
USB1-214ENST00000568848 GKN2Q86XP6 184 aa14.96□□□□□ -0.01
USB1-214ENST00000568848 DTX1Q86Y01 620 aa14.96□□□□□ -0.01
USB1-214ENST00000568848 CAMK1DQ8IU85 385 aa14.96□□□□□ -0.01
USB1-214ENST00000568848 PLPP6Q8IY26 295 aa14.96□□□□□ -0.01
USB1-214ENST00000568848 WDR48Q8TAF3 677 aa14.96□□□□□ -0.01
USB1-214ENST00000568848 TBATAQ96M53 351 aa14.96□□□□□ -0.01
USB1-214ENST00000568848 WDR92Q96MX6 357 aa14.96□□□□□ -0.01
USB1-214ENST00000568848 TMEM74Q96NL1 305 aa14.96□□□□□ -0.01
USB1-214ENST00000568848 RBM15Q96T37 977 aaKnown RBP eCLIP14.96□□□□□ -0.01
USB1-214ENST00000568848 NCAPGQ9BPX3 1015 aa14.96□□□□□ -0.01
USB1-214ENST00000568848 OSBPL1AQ9BXW6 950 aa14.96□□□□□ -0.01
USB1-214ENST00000568848 EPN3Q9H201 632 aa14.96□□□□□ -0.01
USB1-214ENST00000568848 MAGEH1Q9H213 219 aa14.96□□□□□ -0.01
USB1-214ENST00000568848 TMEM9Q9P0T7 183 aa14.96□□□□□ -0.01
USB1-214ENST00000568848 LRIT1Q9P2V4 623 aa14.96□□□□□ -0.01
USB1-214ENST00000568848 PAXBP1Q9Y5B6 917 aa14.96□□□□□ -0.01
USB1-214ENST00000568848 SPTAN1Q13813 2472 aaKnown RBP14.95□□□□□ -0.02
USB1-214ENST00000568848 USP9XQ93008 2570 aaPredicted RBP14.95□□□□□ -0.02
USB1-214ENST00000568848 RASA4BC9J798 803 aa14.95□□□□□ -0.02
USB1-214ENST00000568848 J3KR12 359 aa14.95□□□□□ -0.02
USB1-214ENST00000568848 NVLO15381 856 aaKnown RBP14.95□□□□□ -0.02
USB1-214ENST00000568848 RASA4O43374 803 aa14.95□□□□□ -0.02
USB1-214ENST00000568848 SCNN1AP37088 669 aa14.95□□□□□ -0.02
USB1-214ENST00000568848 SNX16P57768 344 aa14.95□□□□□ -0.02
USB1-214ENST00000568848 B4GALNT1Q00973 533 aa14.95□□□□□ -0.02
USB1-214ENST00000568848 RALGDSQ12967 914 aa14.95□□□□□ -0.02
USB1-214ENST00000568848 EIF3IQ13347 325 aaKnown RBP14.95□□□□□ -0.02
USB1-214ENST00000568848 SPECC1LQ69YQ0 1117 aa14.95□□□□□ -0.02
USB1-214ENST00000568848 EPS8L1Q8TE68 723 aa14.95□□□□□ -0.02
USB1-214ENST00000568848 FAM172AQ8WUF8 416 aa14.95□□□□□ -0.02
USB1-214ENST00000568848 SCG3Q8WXD2 468 aaKnown RBP14.95□□□□□ -0.02
USB1-214ENST00000568848 CELF6Q96J87 481 aaKnown RBP14.95□□□□□ -0.02
USB1-214ENST00000568848 FAM81BQ96LP2 452 aa14.95□□□□□ -0.02
USB1-214ENST00000568848 C1QTNF7Q9BXJ2 289 aa14.95□□□□□ -0.02
USB1-214ENST00000568848 DPEP2Q9H4A9 486 aa14.95□□□□□ -0.02
USB1-214ENST00000568848 CYP4F12Q9HCS2 524 aa14.95□□□□□ -0.02
USB1-214ENST00000568848 SPATS2LQ9NUQ6 558 aaKnown RBP14.95□□□□□ -0.02
USB1-214ENST00000568848 GPATCH2LQ9NWQ4 482 aa14.95□□□□□ -0.02
USB1-214ENST00000568848 ANKMY1Q9P2S6 941 aa14.95□□□□□ -0.02
USB1-214ENST00000568848 ACSL6Q9UKU0 697 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms