RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 MMEP08473 750 aa15.88■□□□□ 0.13
HERPUD1-215ENST00000568676 INPP5AQ14642 412 aa15.88■□□□□ 0.13
HERPUD1-215ENST00000568676 CLPPQ16740 277 aaPredicted RBP15.88■□□□□ 0.13
HERPUD1-215ENST00000568676 C15orf59Q2T9L4 293 aaPredicted RBP15.88■□□□□ 0.13
HERPUD1-215ENST00000568676 LRRC73Q5JTD7 316 aa15.88■□□□□ 0.13
HERPUD1-215ENST00000568676 MIIPQ5JXC2 388 aa15.88■□□□□ 0.13
HERPUD1-215ENST00000568676 CERCAMQ5T4B2 595 aa15.88■□□□□ 0.13
HERPUD1-215ENST00000568676 CFAP58Q5T655 872 aa15.88■□□□□ 0.13
HERPUD1-215ENST00000568676 FAM72AQ5TYM5 149 aa15.88■□□□□ 0.13
HERPUD1-215ENST00000568676 TMEM164Q5U3C3 297 aa15.88■□□□□ 0.13
HERPUD1-215ENST00000568676 FAM72DQ6L9T8 149 aa15.88■□□□□ 0.13
HERPUD1-215ENST00000568676 OGFOD3Q6PK18 319 aa15.88■□□□□ 0.13
HERPUD1-215ENST00000568676 TRIM72Q6ZMU5 477 aa15.88■□□□□ 0.13
HERPUD1-215ENST00000568676 RD3Q7Z3Z2 195 aa15.88■□□□□ 0.13
HERPUD1-215ENST00000568676 FAM72BQ86X60 149 aa15.88■□□□□ 0.13
HERPUD1-215ENST00000568676 HMCESQ96FZ2 354 aa15.88■□□□□ 0.13
HERPUD1-215ENST00000568676 TUBGCP5Q96RT8 1024 aa15.88■□□□□ 0.13
HERPUD1-215ENST00000568676 FOXP3Q9BZS1 431 aa15.88■□□□□ 0.13
HERPUD1-215ENST00000568676 AKAP7Q9P0M2 348 aaPredicted RBP15.88■□□□□ 0.13
HERPUD1-215ENST00000568676 PISDQ9UG56 409 aa15.88■□□□□ 0.13
HERPUD1-215ENST00000568676 WASH4PA8MWX3 477 aa15.87■□□□□ 0.13
HERPUD1-215ENST00000568676 CACNB4O00305 520 aaPredicted RBP15.87■□□□□ 0.13
HERPUD1-215ENST00000568676 TERTO14746 1132 aaKnown RBP15.87■□□□□ 0.13
HERPUD1-215ENST00000568676 TNFRSF10CO14798 259 aa15.87■□□□□ 0.13
HERPUD1-215ENST00000568676 CASC3O15234 703 aaKnown RBP15.87■□□□□ 0.13
HERPUD1-215ENST00000568676 NUDT21O43809 227 aaKnown RBP15.87■□□□□ 0.13
HERPUD1-215ENST00000568676 CYP1A1P04798 512 aaPredicted RBP15.87■□□□□ 0.13
HERPUD1-215ENST00000568676 HOXC4P09017 264 aaPredicted RBP15.87■□□□□ 0.13
HERPUD1-215ENST00000568676 EPHB2P29323 1055 aa15.87■□□□□ 0.13
HERPUD1-215ENST00000568676 AIF1P55008 147 aa15.87■□□□□ 0.13
HERPUD1-215ENST00000568676 GSCP56915 257 aaPredicted RBP15.87■□□□□ 0.13
HERPUD1-215ENST00000568676 KIAA1024LP59773 190 aa15.87■□□□□ 0.13
HERPUD1-215ENST00000568676 CDR2Q01850 454 aa15.87■□□□□ 0.13
HERPUD1-215ENST00000568676 SERINC3Q13530 473 aa15.87■□□□□ 0.13
HERPUD1-215ENST00000568676 TGIF1Q15583 401 aa15.87■□□□□ 0.13
HERPUD1-215ENST00000568676 KIF26BQ2KJY2 2108 aa15.87■□□□□ 0.13
HERPUD1-215ENST00000568676 LEKR1Q6ZMV7 388 aa15.87■□□□□ 0.13
HERPUD1-215ENST00000568676 SLFN11Q7Z7L1 901 aa15.87■□□□□ 0.13
HERPUD1-215ENST00000568676 SUV39H2Q9H5I1 410 aa15.87■□□□□ 0.13
HERPUD1-215ENST00000568676 CATSPERBQ9H7T0 1116 aa15.87■□□□□ 0.13
HERPUD1-215ENST00000568676 DAAM1Q9Y4D1 1078 aa15.87■□□□□ 0.13
HERPUD1-215ENST00000568676 PIEZO2Q9H5I5 2752 aa15.86■□□□□ 0.13
HERPUD1-215ENST00000568676 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.86■□□□□ 0.13
HERPUD1-215ENST00000568676 SUV39H1O43463 412 aa15.86■□□□□ 0.13
HERPUD1-215ENST00000568676 GADD45BO75293 160 aaPredicted RBP15.86■□□□□ 0.13
HERPUD1-215ENST00000568676 PPFIA2O75334 1257 aa15.86■□□□□ 0.13
HERPUD1-215ENST00000568676 KRT3P12035 628 aa15.86■□□□□ 0.13
HERPUD1-215ENST00000568676 ITGB6P18564 788 aa15.86■□□□□ 0.13
HERPUD1-215ENST00000568676 HTR7P34969 479 aa15.86■□□□□ 0.13
HERPUD1-215ENST00000568676 MMP12P39900 470 aa15.86■□□□□ 0.13
HERPUD1-215ENST00000568676 HDAC4P56524 1084 aa15.86■□□□□ 0.13
HERPUD1-215ENST00000568676 ARHGEF7Q14155 803 aa15.86■□□□□ 0.13
HERPUD1-215ENST00000568676 TSR1Q2NL82 804 aaKnown RBP15.86■□□□□ 0.13
HERPUD1-215ENST00000568676 C14orf28Q4W4Y0 310 aa15.86■□□□□ 0.13
HERPUD1-215ENST00000568676 EFHC2Q5JST6 749 aa15.86■□□□□ 0.13
HERPUD1-215ENST00000568676 SPRED1Q7Z699 444 aa15.86■□□□□ 0.13
HERPUD1-215ENST00000568676 DTX1Q86Y01 620 aa15.86■□□□□ 0.13
HERPUD1-215ENST00000568676 UMODL1-AS1Q8N2C9 162 aa15.86■□□□□ 0.13
HERPUD1-215ENST00000568676 CCDC185Q8N715 623 aa15.86■□□□□ 0.13
HERPUD1-215ENST00000568676 OR56A4Q8NGH8 313 aa15.86■□□□□ 0.13
HERPUD1-215ENST00000568676 KIAA1524Q8TCG1 905 aa15.86■□□□□ 0.13
HERPUD1-215ENST00000568676 GPT2Q8TD30 523 aa15.86■□□□□ 0.13
HERPUD1-215ENST00000568676 FAM172AQ8WUF8 416 aa15.86■□□□□ 0.13
HERPUD1-215ENST00000568676 EXTL1Q92935 676 aa15.86■□□□□ 0.13
HERPUD1-215ENST00000568676 NOL6Q9H6R4 1146 aaKnown RBP15.86■□□□□ 0.13
HERPUD1-215ENST00000568676 PCDH12Q9NPG4 1184 aa15.86■□□□□ 0.13
HERPUD1-215ENST00000568676 DACH1Q9UI36 760 aa15.86■□□□□ 0.13
HERPUD1-215ENST00000568676 NOCTQ9UK39 431 aaKnown RBP15.86■□□□□ 0.13
HERPUD1-215ENST00000568676 COQ6Q9Y2Z9 468 aa15.86■□□□□ 0.13
HERPUD1-215ENST00000568676 OR1A2Q9Y585 309 aa15.86■□□□□ 0.13
HERPUD1-215ENST00000568676 PCDHGA4Q9Y5G9 962 aa15.86■□□□□ 0.13
HERPUD1-215ENST00000568676 SPTA1P02549 2419 aa15.85■□□□□ 0.13
HERPUD1-215ENST00000568676 PRAMEF33A0A0G2JMD5 474 aa15.85■□□□□ 0.13
HERPUD1-215ENST00000568676 RASA4BC9J798 803 aa15.85■□□□□ 0.13
HERPUD1-215ENST00000568676 PYCARD-AS1I3L0S3 204 aa15.85■□□□□ 0.13
HERPUD1-215ENST00000568676 PDE2AO00408 941 aaPredicted RBP15.85■□□□□ 0.13
HERPUD1-215ENST00000568676 FGF10O15520 208 aaPredicted RBP15.85■□□□□ 0.13
HERPUD1-215ENST00000568676 RASA4O43374 803 aa15.85■□□□□ 0.13
HERPUD1-215ENST00000568676 PRAMEF10O60809 474 aa15.85■□□□□ 0.13
HERPUD1-215ENST00000568676 HGFP14210 728 aa15.85■□□□□ 0.13
HERPUD1-215ENST00000568676 ITIH2P19823 946 aa15.85■□□□□ 0.13
HERPUD1-215ENST00000568676 ERCC5P28715 1186 aaPredicted RBP15.85■□□□□ 0.13
HERPUD1-215ENST00000568676 CSNK1DP48730 415 aa15.85■□□□□ 0.13
HERPUD1-215ENST00000568676 LIG3P49916 1009 aa15.85■□□□□ 0.13
HERPUD1-215ENST00000568676 HLTFQ14527 1009 aaKnown RBP eCLIP15.85■□□□□ 0.13
HERPUD1-215ENST00000568676 TAF8Q7Z7C8 310 aa15.85■□□□□ 0.13
HERPUD1-215ENST00000568676 SLITRK4Q8IW52 837 aa15.85■□□□□ 0.13
HERPUD1-215ENST00000568676 FAM46DQ8NEK8 389 aa15.85■□□□□ 0.13
HERPUD1-215ENST00000568676 PDXPQ96GD0 296 aa15.85■□□□□ 0.13
HERPUD1-215ENST00000568676 ADNPQ9H2P0 1102 aa15.85■□□□□ 0.13
HERPUD1-215ENST00000568676 KCTD5Q9NXV2 234 aa15.85■□□□□ 0.13
HERPUD1-215ENST00000568676 LRIT1Q9P2V4 623 aa15.85■□□□□ 0.13
HERPUD1-215ENST00000568676 LHX3Q9UBR4 397 aa15.85■□□□□ 0.13
HERPUD1-215ENST00000568676 UBA2Q9UBT2 640 aaPredicted RBP15.85■□□□□ 0.13
HERPUD1-215ENST00000568676 ATP8A1Q9Y2Q0 1164 aa15.85■□□□□ 0.13
HERPUD1-215ENST00000568676 PES1O00541 588 aaKnown RBP15.84■□□□□ 0.13
HERPUD1-215ENST00000568676 PIGNO95427 931 aa15.84■□□□□ 0.13
HERPUD1-215ENST00000568676 CPNE6O95741 557 aa15.84■□□□□ 0.13
HERPUD1-215ENST00000568676 PCCBP05166 539 aa15.84■□□□□ 0.13
HERPUD1-215ENST00000568676 DESP17661 470 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms