RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 FATE1Q969F0 183 aa29.61■■■□□ 2.33
RAB40C-211ENST00000568586 NUDCD1Q96RS6 583 aa29.61■■■□□ 2.33
RAB40C-211ENST00000568586 KNTC1P50748 2209 aa29.61■■■□□ 2.33
RAB40C-211ENST00000568586 PLXNB3Q9ULL4 1909 aa29.61■■■□□ 2.33
RAB40C-211ENST00000568586 GOLGA8CPA6NN73 597 aa29.6■■■□□ 2.33
RAB40C-211ENST00000568586 AKR1B15C9JRZ8 316 aaPredicted RBP29.6■■■□□ 2.33
RAB40C-211ENST00000568586 CKMT2P17540 419 aa29.6■■■□□ 2.33
RAB40C-211ENST00000568586 ARHGAP25P42331 645 aa29.6■■■□□ 2.33
RAB40C-211ENST00000568586 GALNT2Q10471 571 aa29.6■■■□□ 2.33
RAB40C-211ENST00000568586 DNAJC3Q13217 504 aa29.6■■■□□ 2.33
RAB40C-211ENST00000568586 PDE1CQ14123 709 aaPredicted RBP29.6■■■□□ 2.33
RAB40C-211ENST00000568586 ANKRD20A8PQ5CZ79 823 aa29.6■■■□□ 2.33
RAB40C-211ENST00000568586 MAP7D3Q8IWC1 876 aa29.6■■■□□ 2.33
RAB40C-211ENST00000568586 KCTD6Q8NC69 237 aa29.6■■■□□ 2.33
RAB40C-211ENST00000568586 MBNL1Q9NR56 388 aaKnown RBP29.6■■■□□ 2.33
RAB40C-211ENST00000568586 SPTLC3Q9NUV7 552 aa29.6■■■□□ 2.33
RAB40C-211ENST00000568586 KLF15Q9UIH9 416 aa29.6■■■□□ 2.33
RAB40C-211ENST00000568586 INTUQ9ULD6 942 aa29.6■■■□□ 2.33
RAB40C-211ENST00000568586 A0A1W2PQ67 120 aa29.59■■■□□ 2.33
RAB40C-211ENST00000568586 SOCS5O75159 536 aa29.59■■■□□ 2.33
RAB40C-211ENST00000568586 C6P13671 934 aa29.59■■■□□ 2.33
RAB40C-211ENST00000568586 ZNF235Q14590 738 aa29.59■■■□□ 2.33
RAB40C-211ENST00000568586 NCBP2-AS2Q69YL0 99 aa29.59■■■□□ 2.33
RAB40C-211ENST00000568586 RHOT2Q8IXI1 618 aa29.59■■■□□ 2.33
RAB40C-211ENST00000568586 DNAJC28Q9NX36 388 aa29.59■■■□□ 2.33
RAB40C-211ENST00000568586 CSNK1G3Q9Y6M4 447 aa29.59■■■□□ 2.33
RAB40C-211ENST00000568586 SCAMP1O15126 338 aa29.58■■■□□ 2.33
RAB40C-211ENST00000568586 SIGLEC6O43699 453 aa29.58■■■□□ 2.33
RAB40C-211ENST00000568586 RFPL3O75679 317 aa29.58■■■□□ 2.33
RAB40C-211ENST00000568586 ACP1P24666 158 aa29.58■■■□□ 2.33
RAB40C-211ENST00000568586 LIG3P49916 1009 aa29.58■■■□□ 2.33
RAB40C-211ENST00000568586 RALGDSQ12967 914 aa29.58■■■□□ 2.33
RAB40C-211ENST00000568586 EIF2B5Q13144 721 aaKnown RBP29.58■■■□□ 2.33
RAB40C-211ENST00000568586 PTK2BQ14289 1009 aa29.58■■■□□ 2.33
RAB40C-211ENST00000568586 LRRC14Q15048 493 aa29.58■■■□□ 2.33
RAB40C-211ENST00000568586 WSCD2Q2TBF2 565 aa29.58■■■□□ 2.33
RAB40C-211ENST00000568586 MARC1Q5VT66 337 aa29.58■■■□□ 2.33
RAB40C-211ENST00000568586 KDM7AQ6ZMT4 941 aa29.58■■■□□ 2.33
RAB40C-211ENST00000568586 BBS5Q8N3I7 341 aa29.58■■■□□ 2.33
RAB40C-211ENST00000568586 TSGA13Q96PP4 275 aa29.58■■■□□ 2.33
RAB40C-211ENST00000568586 CAAP1Q9H8G2 361 aa29.58■■■□□ 2.33
RAB40C-211ENST00000568586 NLGN3Q9NZ94 848 aa29.58■■■□□ 2.33
RAB40C-211ENST00000568586 NEMP2A6NFY4 417 aa29.57■■■□□ 2.32
RAB40C-211ENST00000568586 ZNF487B1APH4 448 aa29.57■■■□□ 2.32
RAB40C-211ENST00000568586 MFSD11O43934 449 aa29.57■■■□□ 2.32
RAB40C-211ENST00000568586 GARSP41250 739 aaKnown RBP29.57■■■□□ 2.32
RAB40C-211ENST00000568586 PEX5P50542 639 aa29.57■■■□□ 2.32
RAB40C-211ENST00000568586 IRF4Q15306 451 aa29.57■■■□□ 2.32
RAB40C-211ENST00000568586 ZNF542PQ5EBM4 170 aa29.57■■■□□ 2.32
RAB40C-211ENST00000568586 DHRS13Q6UX07 377 aa29.57■■■□□ 2.32
RAB40C-211ENST00000568586 TMPRSS12Q86WS5 348 aa29.57■■■□□ 2.32
RAB40C-211ENST00000568586 VSIG1Q86XK7 387 aa29.57■■■□□ 2.32
RAB40C-211ENST00000568586 PQLC3Q8N755 202 aa29.57■■■□□ 2.32
RAB40C-211ENST00000568586 TC2NQ8N9U0 490 aa29.57■■■□□ 2.32
RAB40C-211ENST00000568586 FAM181AQ8N9Y4 354 aa29.57■■■□□ 2.32
RAB40C-211ENST00000568586 NSMCE1Q8WV22 266 aa29.57■■■□□ 2.32
RAB40C-211ENST00000568586 RFFLQ8WZ73 363 aa29.57■■■□□ 2.32
RAB40C-211ENST00000568586 MAML1Q92585 1016 aa29.57■■■□□ 2.32
RAB40C-211ENST00000568586 TBATAQ96M53 351 aa29.57■■■□□ 2.32
RAB40C-211ENST00000568586 NOD2Q9HC29 1040 aa29.57■■■□□ 2.32
RAB40C-211ENST00000568586 GOLGA4Q13439 2230 aaKnown RBP29.56■■■□□ 2.32
RAB40C-211ENST00000568586 MMP13P45452 471 aa29.56■■■□□ 2.32
RAB40C-211ENST00000568586 MESDQ14696 234 aa29.56■■■□□ 2.32
RAB40C-211ENST00000568586 DPPA4Q7L190 304 aa29.56■■■□□ 2.32
RAB40C-211ENST00000568586 ZNF548Q8NEK5 533 aaPredicted RBP29.56■■■□□ 2.32
RAB40C-211ENST00000568586 TRIM5Q9C035 493 aa29.56■■■□□ 2.32
RAB40C-211ENST00000568586 COQ6Q9Y2Z9 468 aa29.56■■■□□ 2.32
RAB40C-211ENST00000568586 ANKRD11Q6UB99 2663 aaPredicted RBP29.56■■■□□ 2.32
RAB40C-211ENST00000568586 LRRK1Q38SD2 2015 aa29.55■■■□□ 2.32
RAB40C-211ENST00000568586 ANKRD36A6QL64 1941 aa29.55■■■□□ 2.32
RAB40C-211ENST00000568586 H3BM21 787 aa29.55■■■□□ 2.32
RAB40C-211ENST00000568586 KDELR1P24390 212 aa29.55■■■□□ 2.32
RAB40C-211ENST00000568586 THOP1P52888 689 aa29.55■■■□□ 2.32
RAB40C-211ENST00000568586 CAMK2BQ13554 666 aa29.55■■■□□ 2.32
RAB40C-211ENST00000568586 ALG1LQ6GMV1 187 aa29.55■■■□□ 2.32
RAB40C-211ENST00000568586 LIPIQ6XZB0 460 aa29.55■■■□□ 2.32
RAB40C-211ENST00000568586 MACC1Q6ZN28 852 aa29.55■■■□□ 2.32
RAB40C-211ENST00000568586 RAPGEF5Q92565 580 aa29.55■■■□□ 2.32
RAB40C-211ENST00000568586 DUSP23Q9BVJ7 150 aa29.55■■■□□ 2.32
RAB40C-211ENST00000568586 SCUBE2Q9NQ36 999 aa29.55■■■□□ 2.32
RAB40C-211ENST00000568586 PCDHGC4Q9Y5F7 938 aa29.55■■■□□ 2.32
RAB40C-211ENST00000568586 TDRD6O60522 2096 aaKnown RBP29.55■■■□□ 2.32
RAB40C-211ENST00000568586 TTC24A2A3L6 582 aaPredicted RBP29.54■■■□□ 2.32
RAB40C-211ENST00000568586 TMEM110-MUSTN1A8MSY1 372 aa29.54■■■□□ 2.32
RAB40C-211ENST00000568586 MATN3O15232 486 aa29.54■■■□□ 2.32
RAB40C-211ENST00000568586 PRKCGP05129 697 aa29.54■■■□□ 2.32
RAB40C-211ENST00000568586 ALPPL2P10696 532 aa29.54■■■□□ 2.32
RAB40C-211ENST00000568586 CCNCP24863 283 aa29.54■■■□□ 2.32
RAB40C-211ENST00000568586 GJC1P36383 396 aa29.54■■■□□ 2.32
RAB40C-211ENST00000568586 LRRC38Q5VT99 294 aa29.54■■■□□ 2.32
RAB40C-211ENST00000568586 CBARPQ8N350 705 aaPredicted RBP29.54■■■□□ 2.32
RAB40C-211ENST00000568586 BTN2A2Q8WVV5 523 aa29.54■■■□□ 2.32
RAB40C-211ENST00000568586 AMACRQ9UHK6 382 aa29.54■■■□□ 2.32
RAB40C-211ENST00000568586 ZMIZ1Q9ULJ6 1067 aa29.54■■■□□ 2.32
RAB40C-211ENST00000568586 PNMA8BQ9ULN7 279 aaPredicted RBP29.54■■■□□ 2.32
RAB40C-211ENST00000568586 K7ESM1 405 aa29.53■■■□□ 2.32
RAB40C-211ENST00000568586 LCA5LO95447 670 aa29.53■■■□□ 2.32
RAB40C-211ENST00000568586 CKMT1AP12532 417 aa29.53■■■□□ 2.32
RAB40C-211ENST00000568586 JUNDP17535 347 aa29.53■■■□□ 2.32
RAB40C-211ENST00000568586 IFI16Q16666 785 aaKnown RBP29.53■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms