RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 FYB2Q5VWT5 728 aa7.11□□□□□ -1.27
SMG1-215ENST00000568239 ELMSAN1Q6PJG2 1045 aa7.11□□□□□ -1.27
SMG1-215ENST00000568239 ZC3HC1Q86WB0 502 aaKnown RBP7.11□□□□□ -1.27
SMG1-215ENST00000568239 NUDCD3Q8IVD9 361 aa7.11□□□□□ -1.27
SMG1-215ENST00000568239 SLC41A1Q8IVJ1 513 aa7.11□□□□□ -1.27
SMG1-215ENST00000568239 FAM217AQ8IXS0 508 aa7.11□□□□□ -1.27
SMG1-215ENST00000568239 GABPB2Q8TAK5 448 aaPredicted RBP7.11□□□□□ -1.27
SMG1-215ENST00000568239 CALML6Q8TD86 181 aa7.11□□□□□ -1.27
SMG1-215ENST00000568239 BRSK1Q8TDC3 778 aa7.11□□□□□ -1.27
SMG1-215ENST00000568239 TADA1Q96BN2 335 aa7.11□□□□□ -1.27
SMG1-215ENST00000568239 ELMO2Q96JJ3 720 aa7.11□□□□□ -1.27
SMG1-215ENST00000568239 NDNQ99608 321 aa7.11□□□□□ -1.27
SMG1-215ENST00000568239 ADGRE3Q9BY15 652 aa7.11□□□□□ -1.27
SMG1-215ENST00000568239 PBX4Q9BYU1 374 aa7.11□□□□□ -1.27
SMG1-215ENST00000568239 UNKQ9C0B0 810 aaKnown RBP7.11□□□□□ -1.27
SMG1-215ENST00000568239 NKX2-4Q9H2Z4 354 aa7.11□□□□□ -1.27
SMG1-215ENST00000568239 RHOJQ9H4E5 214 aa7.11□□□□□ -1.27
SMG1-215ENST00000568239 DCDC2Q9UHG0 476 aa7.11□□□□□ -1.27
SMG1-215ENST00000568239 EVLQ9UI08 416 aaPredicted RBP7.11□□□□□ -1.27
SMG1-215ENST00000568239 OR51B4Q9Y5P0 310 aa7.11□□□□□ -1.27
SMG1-215ENST00000568239 RFXAPO00287 272 aa7.11□□□□□ -1.27
SMG1-215ENST00000568239 ZNF197O14709 1029 aa7.11□□□□□ -1.27
SMG1-215ENST00000568239 SNX3O60493 162 aa7.11□□□□□ -1.27
SMG1-215ENST00000568239 DNAJC6O75061 913 aa7.11□□□□□ -1.27
SMG1-215ENST00000568239 CRTAMO95727 393 aa7.11□□□□□ -1.27
SMG1-215ENST00000568239 EPOP01588 193 aa7.11□□□□□ -1.27
SMG1-215ENST00000568239 C2P06681 752 aa7.11□□□□□ -1.27
SMG1-215ENST00000568239 ALADP13716 330 aa7.11□□□□□ -1.27
SMG1-215ENST00000568239 TYRP14679 529 aa7.11□□□□□ -1.27
SMG1-215ENST00000568239 HLA-FP30511 346 aa7.11□□□□□ -1.27
SMG1-215ENST00000568239 HOXA9P31269 272 aa7.11□□□□□ -1.27
SMG1-215ENST00000568239 CCNFP41002 786 aa7.11□□□□□ -1.27
SMG1-215ENST00000568239 CTSOP43234 321 aaPredicted RBP7.11□□□□□ -1.27
SMG1-215ENST00000568239 ERVK-21P61565 698 aa7.11□□□□□ -1.27
SMG1-215ENST00000568239 IRF9Q00978 393 aa7.11□□□□□ -1.27
SMG1-215ENST00000568239 TRAF2Q12933 501 aa7.11□□□□□ -1.27
SMG1-215ENST00000568239 FRG1Q14331 258 aaKnown RBP7.11□□□□□ -1.27
SMG1-215ENST00000568239 ZNF460Q14592 562 aa7.11□□□□□ -1.27
SMG1-215ENST00000568239 LY6G5CQ5SRR4 150 aa7.11□□□□□ -1.27
SMG1-215ENST00000568239 MPP7Q5T2T1 576 aa7.11□□□□□ -1.27
SMG1-215ENST00000568239 ALG1LQ6GMV1 187 aa7.11□□□□□ -1.27
SMG1-215ENST00000568239 CNSTQ6PJW8 725 aa7.11□□□□□ -1.27
SMG1-215ENST00000568239 ZCCHC23Q6ZST2 131 aa7.11□□□□□ -1.27
SMG1-215ENST00000568239 SPATA21Q7Z572 469 aa7.11□□□□□ -1.27
SMG1-215ENST00000568239 CAMK1DQ8IU85 385 aa7.11□□□□□ -1.27
SMG1-215ENST00000568239 TNS4Q8IZW8 715 aa7.11□□□□□ -1.27
SMG1-215ENST00000568239 LEMD2Q8NC56 503 aa7.11□□□□□ -1.27
SMG1-215ENST00000568239 FIBINQ8TAL6 211 aa7.11□□□□□ -1.27
SMG1-215ENST00000568239 ACMSDQ8TDX5 336 aa7.11□□□□□ -1.27
SMG1-215ENST00000568239 ACDQ96AP0 544 aa7.11□□□□□ -1.27
SMG1-215ENST00000568239 ALG14Q96F25 216 aa7.11□□□□□ -1.27
SMG1-215ENST00000568239 FAM167BQ9BTA0 163 aa7.11□□□□□ -1.27
SMG1-215ENST00000568239 SLC28A3Q9HAS3 691 aa7.11□□□□□ -1.27
SMG1-215ENST00000568239 BPIFA1Q9NP55 256 aa7.11□□□□□ -1.27
SMG1-215ENST00000568239 ZDHHC7Q9NXF8 308 aa7.11□□□□□ -1.27
SMG1-215ENST00000568239 CRYL1Q9Y2S2 319 aa7.11□□□□□ -1.27
SMG1-215ENST00000568239 REV3LO60673 3130 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 FAM95CA0A1B0GW59 222 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 ANKRD66B4E2M5 251 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 GFRA2O00451 464 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 PIGNO95427 931 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 GLP2RO95838 553 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 GOT2P00505 430 aaKnown RBP7.1□□□□□ -1.27
SMG1-215ENST00000568239 CTPS1P17812 591 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 PFKLP17858 780 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 CES1P23141 567 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 GLRBP48167 497 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 CD151P48509 253 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 MSLNQ13421 630 aaPredicted RBP7.1□□□□□ -1.27
SMG1-215ENST00000568239 CHI3L2Q15782 390 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 TAF1BQ53T94 588 aaPredicted RBP7.1□□□□□ -1.27
SMG1-215ENST00000568239 ZNF789Q5FWF6 425 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 NLRP9Q7RTR0 991 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 PIGWQ7Z7B1 504 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 PLD6Q8N2A8 252 aaKnown RBP7.1□□□□□ -1.27
SMG1-215ENST00000568239 SPATA6LQ8N4H0 392 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 MYLIPQ8WY64 445 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 IRF7Q92985 503 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 ZNF707Q96C28 371 aaPredicted RBP7.1□□□□□ -1.27
SMG1-215ENST00000568239 TSNARE1Q96NA8 513 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 SAMD11Q96NU1 681 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 RANBP9Q96S59 729 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 TSSK1BQ9BXA7 367 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 NPHS2Q9NP85 383 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 TMEM216Q9P0N5 145 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 LHX3Q9UBR4 397 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 CDH22Q9UJ99 828 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 INTS6Q9UL03 887 aaKnown RBP7.1□□□□□ -1.27
SMG1-215ENST00000568239 USP15Q9Y4E8 981 aaPredicted RBP7.1□□□□□ -1.27
SMG1-215ENST00000568239 ARIH1Q9Y4X5 557 aaPredicted RBP7.1□□□□□ -1.27
SMG1-215ENST00000568239 SPO11Q9Y5K1 396 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 EYSQ5T1H1 3165 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 MROH6A6NGR9 719 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 GOLGA8CPA6NN73 597 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 C2orf81A6NN90 581 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 A8MX80 341 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 TRIM24O15164 1050 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 EDF1O60869 148 aaKnown RBP7.1□□□□□ -1.27
SMG1-215ENST00000568239 PAPSS2O95340 614 aaPredicted RBP7.1□□□□□ -1.27
SMG1-215ENST00000568239 PRLP01236 227 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms